Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g04910 Fragaria vesca HOM05D005305 ORTHO05D006394 1.5e-173 612.8 331 100.0
FAN20G0407 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.5e-125 453.4 315 82.2
FAN20G1442 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.5e-125 453.4 315 82.2
FAN20G2254 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.5e-125 453.4 315 82.2
FAN20G2361 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.5e-125 453.4 315 82.2
FAN24G2323 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.4e-102 377.1 315 73.0
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 4.6e-37 159.5 128 69.5
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.0e-37 159.1 128 68.8
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.5e-35 154.5 190 53.7
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 1.9e-35 154.1 283 40.3
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 2.5e-35 153.7 225 50.2
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.1e-34 150.6 327 37.6
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 2.8e-34 150.2 279 40.1
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.1e-33 148.3 157 57.3
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 9.2e-30 135.2 127 59.8
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 9.2e-30 135.2 162 53.1
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 7.3e-27 125.6 129 56.6
FAN02G0608 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.2e-23 114.0 97 64.9
FAN02G3216 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.4e-23 112.5 125 54.4
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 8.4e-23 112.1 96 64.6
FAN05G3957 Fragaria x ananassa HOM05D005305 ORTHO05D006394 8.6e-20 102.1 97 59.8
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 1.1e-17 95.1 165 41.2
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 2.4e-17 94.0 154 45.5
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 5.2e-17 92.8 147 43.5
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 1.2e-16 91.7 133 45.1
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 1.3e-15 88.2 163 41.1
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 1.3e-15 88.2 171 37.4
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 2.2e-15 87.4 158 38.0
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 2.2e-15 87.4 158 38.0
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 2.2e-15 87.4 100 56.0
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 1.4e-14 84.7 165 37.6
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 1.9e-14 84.3 149 43.0
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 2.4e-14 84.0 149 40.3
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 3.2e-14 83.6 165 36.4
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 2.1e-13 80.9 137 38.0
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 4.6e-13 79.7 145 37.2
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 4.6e-13 79.7 145 37.2
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 4.6e-13 79.7 164 36.6
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 1.0e-12 78.6 149 39.6
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 1.3e-12 78.2 161 38.5
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 2.3e-12 77.4 172 33.7
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 3.9e-12 76.6 134 38.8
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 6.6e-12 75.9 149 37.6
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 1.1e-11 75.1 139 38.8
FvH4_4g36551 Fragaria vesca HOM05D005305 ORTHO05D006394 1.5e-11 74.7 117 43.6
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 1.9e-11 74.3 132 40.9
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 7.3e-11 72.4 153 37.9
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 7.3e-11 72.4 150 38.0
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 7.3e-11 72.4 135 37.0
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 9.6e-11 72.0 146 37.7
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 9.6e-11 72.0 146 37.7
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 9.6e-11 72.0 139 39.6
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 9.6e-11 72.0 146 37.7
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 9.6e-11 72.0 151 37.7
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 1.6e-10 71.2 156 37.2
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 3.6e-10 70.1 148 37.2
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 4.8e-10 69.7 131 38.9
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 4.8e-10 69.7 148 36.5
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 8.1e-10 68.9 134 39.6
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 8.1e-10 68.9 135 37.8
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 8.1e-10 68.9 143 35.0
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 1.1e-09 68.6 149 35.6
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 1.1e-09 68.6 146 37.0
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 1.4e-09 68.2 148 35.1
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 1.4e-09 68.2 148 35.1
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 1.4e-09 68.2 148 35.1
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 1.4e-09 68.2 148 35.1
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 1.8e-09 67.8 132 37.9
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 2.4e-09 67.4 161 33.5
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 2.4e-09 67.4 134 38.1
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 2.4e-09 67.4 136 36.0
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 3.1e-09 67.0 157 35.0
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 6.9e-09 65.9 126 38.1
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 6.9e-09 65.9 148 34.5
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 6.9e-09 65.9 126 38.9
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 9.0e-09 65.5 173 31.8
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 1.5e-08 64.7 78 44.9
FAN12G4281 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.5e-08 64.7 39 74.4
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 1.5e-08 64.7 135 33.3
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 1.5e-08 64.7 162 35.2
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 2.0e-08 64.3 149 35.6
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 2.0e-08 64.3 185 30.8
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 3.4e-08 63.5 138 34.1
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 5.8e-08 62.8 133 35.3
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 5.8e-08 62.8 126 36.5
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 1.7e-07 61.2 150 33.3
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 8.4e-07 58.9 143 32.9
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 1.1e-06 58.5 138 34.8
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 3.2e-06 57.0 134 34.3
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 4.2e-06 56.6 75 48.0
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.2e-06 56.6 75 48.0
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 5.4e-06 56.2 136 33.1


User provided reference genes

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