Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 2.6e-162 575.5 327 100.0
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.6e-159 566.2 327 93.0
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.6e-159 566.2 327 93.0
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.5e-141 504.2 330 85.5
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.0e-137 493.8 330 83.6
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 1.6e-130 469.9 327 78.6
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.7e-124 448.7 327 80.1
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 6.8e-94 348.2 328 63.4
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 6.6e-89 331.6 329 61.4
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 1.8e-65 253.8 326 51.5
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 4.3e-64 249.2 338 50.6
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 2.8e-63 246.5 333 50.5
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 4.8e-63 245.7 340 50.0
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 8.2e-63 245.0 333 50.5
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 1.8e-62 243.8 332 49.7
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 2.4e-62 243.4 333 50.2
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 6.9e-62 241.9 330 49.7
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 6.9e-62 241.9 332 48.5
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.5e-61 240.7 328 50.0
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 4.5e-61 239.2 331 49.8
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 2.9e-60 236.5 338 50.6
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 2.5e-59 233.4 333 47.4
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 2.5e-59 233.4 336 48.2
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 1.8e-57 227.3 331 49.2
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 1.1e-56 224.6 326 47.2
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.9e-56 223.8 335 46.9
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 7.4e-56 221.9 330 48.2
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 2.8e-55 219.9 336 47.0
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 4.8e-55 219.2 330 48.5
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 1.1e-54 218.0 337 46.6
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 1.4e-54 217.6 312 48.4
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 3.4e-53 213.0 329 46.8
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.3e-52 211.1 351 45.9
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 5.0e-52 209.1 396 42.2
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 6.5e-52 208.8 336 43.5
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 1.4e-51 207.6 345 44.1
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 6.1e-50 202.2 333 45.0
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 6.1e-50 202.2 316 45.3
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 3.0e-49 199.9 312 47.1
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.0e-48 197.2 332 43.1
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 3.3e-48 196.4 344 44.2
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 4.3e-48 196.1 122 90.2
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.8e-46 190.7 340 42.1
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 2.4e-46 190.3 337 44.5
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 5.9e-45 185.7 345 42.6
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 6.5e-44 182.2 309 45.0
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 1.8e-41 174.1 328 39.6
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 2.3e-41 173.7 328 39.6
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 5.1e-41 172.6 336 41.7
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.7e-39 167.5 315 39.0
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 8.2e-39 165.2 372 37.1
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 8.2e-39 165.2 325 41.5
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.4e-38 164.5 314 38.9
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 1.8e-38 164.1 290 44.5
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 2.4e-38 163.7 330 39.1
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 9.1e-38 161.8 290 43.1
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 9.1e-38 161.8 331 39.3
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 2.6e-37 160.2 332 41.0
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 7.7e-37 158.7 333 39.6
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.1e-35 154.8 325 40.9
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 1.5e-35 154.5 367 36.0
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 1.5e-35 154.5 315 41.3
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 5.5e-35 152.5 334 36.2
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 7.2e-35 152.1 333 42.3
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 1.4e-33 147.9 343 37.0
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.4e-33 147.9 353 38.2
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 2.0e-32 144.1 332 37.0
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 4.4e-32 142.9 332 38.0
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 4.4e-32 142.9 337 40.7
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 7.4e-32 142.1 324 35.5
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 1.3e-31 141.4 340 38.2
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 3.7e-31 139.8 329 37.1
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 4.8e-31 139.4 404 35.4
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 8.2e-31 138.7 238 39.1
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 1.1e-30 138.3 334 38.9
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 1.1e-30 138.3 337 37.1
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 2.4e-30 137.1 334 35.6
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 7.0e-30 135.6 170 47.1
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.6e-29 134.4 330 37.9
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 2.0e-29 134.0 327 34.9
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 3.5e-29 133.3 164 48.8
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 5.9e-29 132.5 332 42.2
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 1.0e-28 131.7 169 49.1
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 2.9e-28 130.2 314 36.6
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 6.5e-28 129.0 243 40.7
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 8.5e-28 128.6 145 53.1
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 2.7e-26 123.6 332 37.0
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 4.0e-25 119.8 333 34.8
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 2.0e-24 117.5 338 34.0
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 5.7e-24 115.9 337 35.3
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 9.8e-24 115.2 334 38.9
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 2.2e-23 114.0 244 40.6
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 3.7e-23 113.2 329 37.1
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 3.7e-23 113.2 331 40.8
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 4.8e-23 112.8 327 35.8
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 6.3e-23 112.5 249 37.3
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 8.3e-23 112.1 338 38.2
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 4.1e-22 109.8 284 39.8
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 4.1e-22 109.8 323 34.7
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.2e-21 108.2 162 45.1
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 5.9e-21 105.9 340 36.8
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 5.9e-21 105.9 292 39.0
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 1.7e-20 104.4 331 31.7
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 1.1e-19 101.7 295 32.5
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 1.9e-19 100.9 334 35.9
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 3.2e-19 100.1 342 37.4
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 4.2e-19 99.8 227 37.0
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 7.2e-19 99.0 143 44.1
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 1.2e-18 98.2 318 36.2
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 1.6e-18 97.8 331 33.5
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 1.4e-17 94.7 325 33.5
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 2.0e-16 90.9 307 32.6
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 2.6e-16 90.5 333 39.9
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 8.3e-15 85.5 163 35.6
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 1.7e-12 77.8 330 39.7
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 6.6e-12 75.9 186 36.0
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 1.5e-11 74.7 255 28.6
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 2.8e-10 70.5 328 31.4
Dinv15805 Davidia involucrata HOM05D006273 ORTHO05D007607 3.6e-10 70.1 125 41.6
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 4.7e-10 69.7 260 29.6
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 3.7e-07 60.1 235 33.2
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 1.4e-06 58.2 65 61.5


User provided reference genes

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