Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g04291 Fragaria vesca HOM05D007107 ORTHO05D025431 4.8e-67 257.7 128 100.0
FAN15G2005 Fragaria x ananassa HOM05D007107 ORTHO05D025431 3.0e-53 211.8 113 92.0
FAN24G0803 Fragaria x ananassa HOM05D007107 ORTHO05D025431 8.7e-53 210.3 116 92.2
FAN24G0788 Fragaria x ananassa HOM05D007107 ORTHO05D025431 7.6e-49 197.2 109 91.7
RcHm_v2.0_Chr6g0253731 Rosa chinensis HOM05D007107 ORTHO05D025431 1.8e-26 122.9 106 60.4
Prupe.8G144000 Prunus persica HOM05D007107 ORTHO05D009198 1.3e-11 73.6 91 51.6
Oeu009671.1 Olea europaea HOM05D007107 ORTHO05D009198 8.3e-11 70.9 91 49.5
RcHm_v2.0_Chr6g0253681 Rosa chinensis HOM05D007107 ORTHO05D009198 1.1e-10 70.5 102 45.1
RcHm_v2.0_Chr6g0253721 Rosa chinensis HOM05D007107 ORTHO05D009198 4.1e-10 68.6 103 44.7
CSS0046981 Camellia sinensis var. sinensis HOM05D007107 ORTHO05D009198 5.4e-10 68.2 82 54.9
FAN24G0068 Fragaria x ananassa HOM05D007107 ORTHO05D009198 1.3e-08 63.5 105 41.9
FvH4_2g04290 Fragaria vesca HOM05D007107 ORTHO05D009198 1.7e-08 63.2 103 42.7
Oeu010443.1 Olea europaea HOM05D007107 ORTHO05D009198 3.8e-08 62.0 91 47.3
Haze_10225 Corylus avellana HOM05D007107 ORTHO05D009198 5.0e-08 61.6 61 55.7
CsaV3_4G000330 Cucumis sativus L. HOM05D007107 ORTHO05D009198 5.0e-08 61.6 81 44.4
TAR628G1630 Trochodendron aralioides HOM05D007107 ORTHO05D009198 6.5e-08 61.2 93 45.2
Atru.chr5.2359 Acer truncatum HOM05D007107 ORTHO05D009198 8.5e-08 60.8 94 44.7
Cfa004630 Carpinus fangiana HOM05D007107 ORTHO05D009198 1.5e-07 60.1 61 57.4
ClCG10G010430 Citrullus lanatus HOM05D007107 ORTHO05D009198 1.5e-07 60.1 81 42.0
FAN20G1224 Fragaria x ananassa HOM05D007107 ORTHO05D009198 1.9e-07 59.7 92 45.7
Rhsim11G0151000 Rhododendron simsii HOM05D007107 ORTHO05D009198 1.9e-07 59.7 86 41.9
CiPaw.05G017500 Carya illinoinensis HOM05D007107 ORTHO05D009198 2.5e-07 59.3 106 38.7
MD10G1105100 Malus domestica HOM05D007107 ORTHO05D009198 4.2e-07 58.5 102 46.1
CiPaw.06G165600 Carya illinoinensis HOM05D007107 ORTHO05D009198 5.5e-07 58.2 99 40.4
Sed0023372 Sechium edule HOM05D007107 ORTHO05D009198 5.5e-07 58.2 90 41.1
Duzib248G0453 Durio zibethinus HOM05D000446 ORTHO05D000321 7.2e-07 57.8 116 36.2
Gohir.D12G020100 Gossypium hirsutum HOM05D007107 ORTHO05D009198 7.2e-07 57.8 86 40.7
Gorai.008G020500 Gossypium raimondii HOM05D007107 ORTHO05D009198 7.2e-07 57.8 81 42.0
Gohir.A12G019900 Gossypium hirsutum HOM05D007107 ORTHO05D009198 9.4e-07 57.4 86 40.7
TAR376G0510 Trochodendron aralioides HOM05D007107 ORTHO05D009198 9.4e-07 57.4 102 41.2
MELO3C018001.2 Cucumis melo HOM05D007107 ORTHO05D009198 1.2e-06 57.0 82 43.9
Thecc.02G116600 Theobroma cacao HOM05D007107 ORTHO05D009198 1.6e-06 56.6 108 38.9
Duzib248G0083 Durio zibethinus HOM05D007107 ORTHO05D009198 2.7e-06 55.8 115 35.7
Oeu011135.1 Olea europaea HOM05D007107 ORTHO05D009198 4.7e-06 55.1 80 45.0
Duzib132G0703 Durio zibethinus HOM05D007107 ORTHO05D009198 6.1e-06 54.7 89 39.3


User provided reference genes

Program Settings