Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g04290 Fragaria vesca HOM05D007107 ORTHO05D009198 1.5e-56 222.6 114 100.0
FAN24G0068 Fragaria x ananassa HOM05D007107 ORTHO05D009198 1.5e-56 222.6 114 100.0
FAN15G2005 Fragaria x ananassa HOM05D007107 ORTHO05D025431 2.0e-53 212.2 113 94.7
FAN20G1224 Fragaria x ananassa HOM05D007107 ORTHO05D009198 1.4e-49 199.5 114 91.2
RcHm_v2.0_Chr6g0253681 Rosa chinensis HOM05D007107 ORTHO05D009198 1.6e-42 176.0 114 84.2
RcHm_v2.0_Chr6g0253721 Rosa chinensis HOM05D007107 ORTHO05D009198 1.3e-39 166.4 111 84.7
Prupe.8G144000 Prunus persica HOM05D007107 ORTHO05D009198 4.7e-26 121.3 109 59.6
MD10G1105100 Malus domestica HOM05D007107 ORTHO05D009198 1.1e-19 100.1 109 53.2
FAN24G1269 Fragaria x ananassa HOM05D007107 ORTHO05D009198 1.3e-18 96.7 47 100.0
Oeu009671.1 Olea europaea HOM05D007107 ORTHO05D009198 8.4e-15 84.0 83 56.6
Oeu010443.1 Olea europaea HOM05D007107 ORTHO05D009198 1.2e-13 80.1 84 58.3
Manes.07G058800 Manihot esculenta HOM05D007107 ORTHO05D009198 1.8e-12 76.3 112 49.1
Haze_10225 Corylus avellana HOM05D007107 ORTHO05D009198 3.0e-12 75.5 113 48.7
PGR042G2158 Punica granatum HOM05D007107 ORTHO05D009198 6.7e-12 74.3 108 48.1
Gohir.D12G020100 Gossypium hirsutum HOM05D007107 ORTHO05D009198 1.9e-11 72.8 72 56.9
Gorai.008G020500 Gossypium raimondii HOM05D007107 ORTHO05D009198 1.9e-11 72.8 72 56.9
Thecc.02G116600 Theobroma cacao HOM05D007107 ORTHO05D009198 2.5e-11 72.4 108 46.3
Lalb_Chr06g0165131 Lupinus albus HOM05D007107 ORTHO05D009198 4.3e-11 71.6 110 46.4
Cfa004630 Carpinus fangiana HOM05D007107 ORTHO05D009198 5.6e-11 71.2 93 51.6
COL.COLO4_32518 Corchorus olitorius HOM05D007107 ORTHO05D009198 5.6e-11 71.2 114 42.1
Lsat_1_v5_gn_9_111721 Lactuca sativa HOM05D007107 ORTHO05D009198 5.6e-11 71.2 82 50.0
Oeu011135.1 Olea europaea HOM05D007107 ORTHO05D009198 7.4e-11 70.9 62 66.1
Gohir.A12G019900 Gossypium hirsutum HOM05D007107 ORTHO05D009198 9.6e-11 70.5 72 55.6
Lj5g0011883 Lotus japonicus HOM05D007107 ORTHO05D009198 9.6e-11 70.5 93 49.5
Duzib132G0703 Durio zibethinus HOM05D007107 ORTHO05D009198 1.3e-10 70.1 112 42.9
Gohir.A13G046600 Gossypium hirsutum HOM05D007107 ORTHO05D009198 1.3e-10 70.1 105 46.7
Thhalv10021824m.g Eutrema salsugineum HOM05D007107 ORTHO05D009198 1.6e-10 69.7 92 47.8
Prupe.8G144100 Prunus persica HOM05D007107 ORTHO05D009198 1.6e-10 69.7 90 48.9
Atru.chr5.2359 Acer truncatum HOM05D007107 ORTHO05D009198 2.1e-10 69.3 80 51.2
CSS0046981 Camellia sinensis var. sinensis HOM05D007107 ORTHO05D009198 2.1e-10 69.3 100 48.0
Ciclev10029615m.g Citrus clementina HOM05D007107 ORTHO05D009198 2.8e-10 68.9 61 63.9
TAR628G1630 Trochodendron aralioides HOM05D007107 ORTHO05D009198 2.8e-10 68.9 108 48.1
Glyma.10G257200 Glycine max HOM05D007107 ORTHO05D009198 3.6e-10 68.6 78 51.3
Glyma.20G134000 Glycine max HOM05D007107 ORTHO05D009198 4.8e-10 68.2 91 49.5
Medtr1g106215 Medicago truncatula HOM05D007107 ORTHO05D009198 4.8e-10 68.2 92 47.8
Nn5g30571 Nelumbo nucifera HOM05D007107 ORTHO05D009198 6.2e-10 67.8 113 41.6
Peaxi162Scf00016g02820 Petunia axillaris HOM05D007107 ORTHO05D009198 6.2e-10 67.8 81 54.3
Duzib248G0453 Durio zibethinus HOM05D000446 ORTHO05D000321 8.1e-10 67.4 113 43.4
TPR.G27135 Trifolium pratense HOM05D007107 ORTHO05D009198 1.8e-09 66.2 92 47.8
Duzib248G0083 Durio zibethinus HOM05D007107 ORTHO05D009198 2.4e-09 65.9 113 42.5
Ca_11033_v3 Cicer arietinum L. HOM05D007107 ORTHO05D009198 3.1e-09 65.5 94 45.7
Psat6g214960 Pisum sativum HOM05D007107 ORTHO05D009198 3.1e-09 65.5 63 57.1
ClCG10G010430 Citrullus lanatus HOM05D007107 ORTHO05D009198 4.0e-09 65.1 80 48.8
Nitab4.5_0001105g0070 Nicotiana tabacum HOM05D007107 ORTHO05D009198 4.0e-09 65.1 102 46.1
Nitab4.5_0008075g0020 Nicotiana tabacum HOM05D007107 ORTHO05D009198 4.0e-09 65.1 80 52.5
RcHm_v2.0_Chr6g0253731 Rosa chinensis HOM05D007107 ORTHO05D025431 4.0e-09 65.1 103 48.5
Gohir.D13G042600 Gossypium hirsutum HOM05D007107 ORTHO05D009198 5.3e-09 64.7 105 44.8
Gorai.013G050500 Gossypium raimondii HOM05D007107 ORTHO05D009198 5.3e-09 64.7 105 44.8
Carub.0003s1948 Capsella rubella HOM05D007107 ORTHO05D009198 6.9e-09 64.3 72 51.4
Cc02_g19820 Coffea canephora HOM05D007107 ORTHO05D009198 9.0e-09 63.9 99 46.5
MELO3C018001.2 Cucumis melo HOM05D007107 ORTHO05D009198 9.0e-09 63.9 105 42.9
Solyc01g107090.2 Solanum lycopersicum HOM05D007107 ORTHO05D009198 9.0e-09 63.9 74 55.4
Sopen01g049360 Solanum pennellii HOM05D007107 ORTHO05D009198 9.0e-09 63.9 74 55.4
Eucgr.G01220 Eucalyptus grandis HOM05D007107 ORTHO05D009198 1.2e-08 63.5 110 39.1
Hma1.2p1_1773F.1_g301790 Hydrangea macrophylla HOM05D007107 ORTHO05D009198 1.2e-08 63.5 83 48.2
Phvul.007G045200 Phaseolus vulgaris HOM05D007107 ORTHO05D009198 1.2e-08 63.5 92 46.7
Rhsim11G0151000 Rhododendron simsii HOM05D007107 ORTHO05D009198 1.2e-08 63.5 99 44.4
A03p41330 Brassica napus HOM05D007107 ORTHO05D009198 1.5e-08 63.2 72 51.4
BraA03t13287Z Brassica rapa HOM05D007107 ORTHO05D009198 1.5e-08 63.2 72 51.4
CsaV3_4G000330 Cucumis sativus L. HOM05D007107 ORTHO05D009198 1.5e-08 63.2 105 42.9
Aqoxy5G00877 Aquilegia oxysepala HOM05D007107 ORTHO05D009198 2.0e-08 62.8 86 53.5
AL3G33050 Arabidopsis lyrata HOM05D007107 ORTHO05D009198 2.0e-08 62.8 72 51.4
Sed0023372 Sechium edule HOM05D007107 ORTHO05D009198 2.0e-08 62.8 87 44.8
CiPaw.05G017500 Carya illinoinensis HOM05D007107 ORTHO05D009198 2.6e-08 62.4 107 43.0
Potri.001G294800 Populus trichocarpa HOM05D007107 ORTHO05D009198 2.6e-08 62.4 107 43.0
TAR376G0510 Trochodendron aralioides HOM05D007107 ORTHO05D009198 3.4e-08 62.0 85 50.6
EL10Ac8g19388 Beta vulgaris HOM05D007107 ORTHO05D009198 4.5e-08 61.6 84 52.4
Cpa.g.sc106.53 Carica papaya HOM05D007107 ORTHO05D009198 4.5e-08 61.6 132 39.4
A01p35080 Brassica napus HOM05D007107 ORTHO05D009198 7.6e-08 60.8 72 50.0
BraA01t03589Z Brassica rapa HOM05D007107 ORTHO05D009198 7.6e-08 60.8 72 50.0
CARHR095070 Cardamine hirsuta HOM05D007107 ORTHO05D009198 7.6e-08 60.8 74 47.3
AT3G19615 Arabidopsis thaliana HOM05D007107 ORTHO05D009198 9.9e-08 60.5 72 50.0
BcaB04g20690 Brassica carinata HOM05D007107 ORTHO05D009198 9.9e-08 60.5 72 50.0
BcaC01g03614 Brassica carinata HOM05D007107 ORTHO05D009198 9.9e-08 60.5 69 50.7
BcaC09g48926 Brassica carinata HOM05D007107 ORTHO05D009198 9.9e-08 60.5 72 50.0
C01p44500 Brassica napus HOM05D007107 ORTHO05D009198 9.9e-08 60.5 72 50.0
C03p50490 Brassica napus HOM05D007107 ORTHO05D009198 9.9e-08 60.5 69 50.7
BolC1t04415H Brassica oleracea HOM05D007107 ORTHO05D009198 9.9e-08 60.5 72 50.0
MBI16_g29126_MAGBIO Magnolia biondii HOM05D007107 ORTHO05D009198 9.9e-08 60.5 88 45.5
Sc08g0004510 Simmondsia chinensis HOM05D007107 ORTHO05D009198 9.9e-08 60.5 81 48.1
Sed0004586 Sechium edule HOM05D007107 ORTHO05D009198 1.3e-07 60.1 87 47.1
Migut.B00446 Erythranthe guttata HOM05D007107 ORTHO05D009198 2.2e-07 59.3 60 55.0
QL11p022494 Quercus lobata HOM05D007107 ORTHO05D009198 2.9e-07 58.9 110 41.8
Ah.09g231830 Amaranthus hybridus HOM05D007107 ORTHO05D009198 3.8e-07 58.5 83 50.6
Sopen01g049370 Solanum pennellii HOM05D007107 ORTHO05D009198 3.8e-07 58.5 61 59.0
BolC3t17339H Brassica oleracea HOM05D007107 ORTHO05D009198 4.9e-07 58.2 70 50.0
FvH4_2g04291 Fragaria vesca HOM05D007107 ORTHO05D025431 6.4e-07 57.8 103 42.7
DCAR_001690 Daucus carota HOM05D007107 ORTHO05D009198 8.4e-07 57.4 90 45.6
Solyc01g107100.3 Solanum lycopersicum HOM05D007107 ORTHO05D009198 8.4e-07 57.4 61 57.4
CANSAT25G2317 Cannabis sativa HOM05D007107 ORTHO05D009198 1.1e-06 57.0 109 37.6
ECA234G2040 Erigeron canadensis HOM05D007107 ORTHO05D009198 3.2e-06 55.5 70 50.0
BcaB04g19054 Brassica carinata HOM05D007107 ORTHO05D009198 7.1e-06 54.3 70 51.4
Rhsim11G0153200 Rhododendron simsii HOM05D007107 ORTHO05D009198 9.3e-06 53.9 72 51.4


User provided reference genes

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