Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g03910 Fragaria vesca HOM05D008179 ORTHO05D009362 1.9e-127 459.1 228 100.0
FAN15G0940 Fragaria x ananassa HOM05D008179 ORTHO05D009362 9.2e-114 413.7 228 92.5
FAN22G0489 Fragaria x ananassa HOM05D008179 ORTHO05D009362 3.9e-80 302.0 218 72.0
FAN14G5443 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.0e-76 289.7 226 65.5
FAN05G4853 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.5e-74 282.7 226 64.2
FAN02G3878 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.5e-68 263.5 223 62.3
FvH4_4g13750 Fragaria vesca HOM05D008179 ORTHO05D009362 4.2e-66 255.4 214 64.0
RcHm_v2.0_Chr5g0019881 Rosa chinensis HOM05D008179 ORTHO05D009362 5.5e-66 255.0 226 58.8
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 4.8e-62 241.9 223 57.4
FAN27G1833 Fragaria x ananassa HOM05D008179 ORTHO05D009362 9.4e-58 227.6 149 83.2
FAN20G2427 Fragaria x ananassa HOM05D008179 ORTHO05D009362 6.3e-54 214.9 115 93.0
FvH4_6g24450 Fragaria vesca HOM05D008179 ORTHO05D009362 7.7e-52 208.0 203 55.7
FAN07G0173 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.6e-47 193.0 136 72.8
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 2.5e-42 176.4 229 44.1
FAN12G0136 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.8e-38 162.9 100 81.0
Prupe.4G130000 Prunus persica HOM05D008179 ORTHO05D009362 8.3e-38 161.4 229 42.8
FAN25G2419 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.7e-36 156.4 204 45.6
Prupe.4G219900 Prunus persica HOM05D008179 ORTHO05D009362 5.9e-36 155.2 244 41.4
FAN16G0437 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.0e-35 154.5 147 53.1
RcHm_v2.0_Chr3g0478691 Rosa chinensis HOM05D008179 ORTHO05D009362 1.0e-32 144.4 232 42.2
Prupe.4G220100 Prunus persica HOM05D008179 ORTHO05D009362 8.3e-30 134.8 235 36.6
MD05G1336000 Malus domestica HOM05D008179 ORTHO05D009362 1.2e-28 131.0 229 38.0
Prupe.4G130300 Prunus persica HOM05D008179 ORTHO05D009362 1.0e-27 127.9 243 35.0
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 6.6e-27 125.2 226 38.1
FAN05G1237 Fragaria x ananassa HOM05D008179 ORTHO05D009362 6.6e-27 125.2 230 38.3
Prupe.4G219800 Prunus persica HOM05D008179 ORTHO05D009362 2.5e-26 123.2 227 37.4
MD05G1336100 Malus domestica HOM05D008179 ORTHO05D009362 8.0e-25 118.2 235 35.3
RcHm_v2.0_Chr3g0479021 Rosa chinensis HOM05D008179 ORTHO05D009362 1.4e-24 117.5 234 35.5
MD10G1311600 Malus domestica HOM05D008179 ORTHO05D009362 3.1e-24 116.3 235 37.0
RcHm_v2.0_Chr5g0004511 Rosa chinensis HOM05D008179 ORTHO05D009362 5.2e-24 115.5 232 36.2
FvH4_6g21740 Fragaria vesca HOM05D008179 ORTHO05D009362 2.7e-20 103.2 165 41.2
FAN14G0841 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.7e-20 103.2 165 41.2
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 6.0e-20 102.1 233 34.8
FvH4_6g21492 Fragaria vesca HOM05D008179 ORTHO05D009362 1.0e-19 101.3 133 43.6
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 6.6e-19 98.6 228 31.6
TAR624G0619 Trochodendron aralioides HOM05D008179 ORTHO05D009362 1.1e-18 97.8 234 29.1
FAN14G4501 Fragaria x ananassa HOM05D008179 ORTHO05D009362 4.3e-18 95.9 192 37.0
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 2.1e-17 93.6 197 33.0
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 6.8e-16 88.6 228 31.6
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 1.2e-15 87.8 228 28.9
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 4.9e-14 82.4 201 32.3
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 6.4e-14 82.0 212 29.7
Hma1.2p1_1682F.1_g297290 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 8.3e-14 81.6 150 34.7
FAN14G4642 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.4e-13 80.1 57 64.9
Prupe.4G112100 Prunus persica HOM05D000475 ORTHO05D000343 4.1e-13 79.3 89 46.1
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 9.2e-13 78.2 200 33.0
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 1.2e-12 77.8 212 29.2
DCAR_008111 Daucus carota HOM05D008179 ORTHO05D009362 2.1e-12 77.0 235 29.8
Dinv17850 Davidia involucrata HOM05D008179 ORTHO05D009362 7.8e-12 75.1 140 32.9
DCAR_008113 Daucus carota HOM05D008179 ORTHO05D009362 1.3e-11 74.3 232 28.9
Manes.11G148800 Manihot esculenta HOM05D008179 ORTHO05D009362 1.3e-11 74.3 200 31.5
FAN02G3535 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.5e-10 70.9 60 58.3
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 1.9e-10 70.5 159 32.7
FAN27G1228 Fragaria x ananassa HOM05D008179 ORTHO05D009362 5.6e-10 68.9 38 84.2
DCAR_028233 Daucus carota HOM05D008179 ORTHO05D009362 1.6e-09 67.4 242 26.9
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 3.1e-08 63.2 203 27.1
Nitab4.5_0011228g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.8e-07 58.9 144 31.2
Peaxi162Scf00016g00054 Petunia axillaris HOM05D009034 ORTHO05D009362 5.8e-07 58.9 151 29.1


User provided reference genes

Program Settings