Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g03781 Fragaria vesca HOM05D004492 ORTHO05D005602 3.8e-102 374.8 180 100.0
RcHm_v2.0_Chr6g0294881 Rosa chinensis HOM05D004492 ORTHO05D005602 1.6e-52 209.9 192 57.3
RcHm_v2.0_Chr6g0294891 Rosa chinensis HOM05D004492 ORTHO05D005602 4.1e-48 195.3 191 53.4
FvH4_2g26280 Fragaria vesca HOM05D004492 ORTHO05D005602 4.2e-45 185.3 191 51.3
FAN24G0496 Fragaria x ananassa HOM05D004492 ORTHO05D005602 4.2e-45 185.3 191 51.3
GSVIVG01008928001 Vitis vinifera HOM05D004492 ORTHO05D005602 2.6e-42 176.0 187 49.2
FAN24G3351 Fragaria x ananassa HOM05D004492 ORTHO05D005602 1.3e-41 173.7 142 64.1
Prupe.1G503800 Prunus persica HOM05D004492 ORTHO05D005602 1.7e-41 173.3 188 50.5
QL09p035929 Quercus lobata HOM05D004492 ORTHO05D005602 1.8e-40 169.9 188 44.7
Gohir.D02G081500 Gossypium hirsutum HOM05D004492 ORTHO05D005602 2.4e-40 169.5 188 45.2
FAN15G1155 Fragaria x ananassa HOM05D004492 ORTHO05D005602 5.3e-40 168.3 188 51.6
Gorai.005G091200 Gossypium raimondii HOM05D004492 ORTHO05D005602 7.0e-40 167.9 188 44.7
Thecc.08G118700 Theobroma cacao HOM05D004492 ORTHO05D005602 2.7e-39 166.0 188 44.1
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 5.9e-39 164.9 188 46.3
MD15G1356600 Malus domestica HOM05D004492 ORTHO05D005602 1.0e-38 164.1 189 46.0
CiPaw.06G026300 Carya illinoinensis HOM05D004492 ORTHO05D005602 1.3e-38 163.7 188 43.1
Duzib093G1652 Durio zibethinus HOM05D004492 ORTHO05D005602 1.3e-38 163.7 188 42.6
Cpa.g.sc36.10 Carica papaya HOM05D004492 ORTHO05D005602 1.7e-38 163.3 188 45.7
Hma1.2p1_0038F.1_g023990 Hydrangea macrophylla HOM05D004492 ORTHO05D005602 5.0e-38 161.8 188 45.7
Atru.chr13.1338 Acer truncatum HOM05D004492 ORTHO05D005602 6.5e-38 161.4 188 46.3
Atru.chr13.1381 Acer truncatum HOM05D004492 ORTHO05D005602 6.5e-38 161.4 188 46.3
PGR042G0918 Punica granatum HOM05D004492 ORTHO05D005602 6.5e-38 161.4 188 44.7
TWI12G1231 Tripterygium wilfordii HOM05D004492 ORTHO05D005602 8.5e-38 161.0 187 44.9
Ciclev10001105m.g Citrus clementina HOM05D004492 ORTHO05D005602 1.1e-37 160.6 188 43.6
CSS0028158 Camellia sinensis var. sinensis HOM05D004492 ORTHO05D005602 1.9e-37 159.8 188 46.8
CSS0038302 Camellia sinensis var. sinensis HOM05D004492 ORTHO05D005602 1.9e-37 159.8 188 46.8
Lj1g0007587 Lotus japonicus HOM05D004492 ORTHO05D005602 3.2e-37 159.1 189 42.9
Oeu047923.1 Olea europaea HOM05D004492 ORTHO05D005602 5.5e-37 158.3 188 44.1
TPR.G22341 Trifolium pratense HOM05D004492 ORTHO05D005602 1.2e-36 157.1 187 44.9
ClCG03G009360 Citrullus lanatus HOM05D004492 ORTHO05D005602 2.1e-36 156.4 190 42.6
Lalb_Chr08g0241631 Lupinus albus HOM05D004492 ORTHO05D005602 2.1e-36 156.4 200 43.5
SalBow7G1607 Salvia bowleyana HOM05D004492 ORTHO05D005602 2.1e-36 156.4 195 43.6
CsaV3_5G023260 Cucumis sativus L. HOM05D004492 ORTHO05D005602 3.6e-36 155.6 188 42.6
CAN.G1396.8 Capsicum annuum HOM05D004492 ORTHO05D005602 4.7e-36 155.2 189 42.9
Ca_15216_v3 Cicer arietinum L. HOM05D004492 ORTHO05D005602 4.7e-36 155.2 187 44.4
Psat5g133640 Pisum sativum HOM05D004492 ORTHO05D005602 6.1e-36 154.8 187 44.9
VMungo1309G2182 Vigna mungo HOM05D004492 ORTHO05D005602 6.1e-36 154.8 189 44.4
Peaxi162Scf00051g00731 Petunia axillaris HOM05D004492 ORTHO05D005602 8.0e-36 154.5 188 43.6
Aqoxy5G02431 Aquilegia oxysepala HOM05D004492 ORTHO05D005602 1.0e-35 154.1 188 41.0
Migut.C01175 Erythranthe guttata HOM05D004492 ORTHO05D005602 1.8e-35 153.3 188 41.0
Eucgr.G00611 Eucalyptus grandis HOM05D004492 ORTHO05D005602 1.8e-35 153.3 187 41.7
Medtr3g073000 Medicago truncatula HOM05D004492 ORTHO05D005602 2.3e-35 152.9 187 42.8
TAR625G1407 Trochodendron aralioides HOM05D004492 ORTHO05D005602 3.0e-35 152.5 188 40.4
AUR62030552 Chenopodium quinoa HOM05D004492 ORTHO05D005602 4.0e-35 152.1 201 40.3
Phvul.009G121500 Phaseolus vulgaris HOM05D004492 ORTHO05D005602 5.2e-35 151.8 189 43.4
arahy.Tifrunner.gnm1.ann1.WF7TJ5 Arachis hypogaea HOM05D004492 ORTHO05D005602 8.8e-35 151.0 189 43.9
arahy.Tifrunner.gnm1.ann1.Y35QAD Arachis hypogaea HOM05D004492 ORTHO05D005602 1.2e-34 150.6 189 43.9
Cc10_g10520 Coffea canephora HOM05D004492 ORTHO05D005602 1.2e-34 150.6 187 40.6
Nitab4.5_0000633g0160 Nicotiana tabacum HOM05D004492 ORTHO05D005602 1.2e-34 150.6 188 42.6
Sed0009263 Sechium edule HOM05D004492 ORTHO05D005602 1.5e-34 150.2 188 42.0
MSTRG.25402 Avicennia marina HOM05D004492 ORTHO05D005602 2.0e-34 149.8 199 41.2
Potri.005G173100 Populus trichocarpa HOM05D004492 ORTHO05D005602 2.6e-34 149.4 188 42.0
DCAR_002659 Daucus carota HOM05D004492 ORTHO05D005602 3.4e-34 149.1 194 42.8
Sc23g0000850 Simmondsia chinensis HOM05D004492 ORTHO05D005602 4.4e-34 148.7 189 41.3
Manes.18G073743 Manihot esculenta HOM05D004492 ORTHO05D005602 5.7e-34 148.3 187 40.6
Sopen06g020530 Solanum pennellii HOM05D004492 ORTHO05D005602 5.7e-34 148.3 189 41.8
PGSC0003DMG400017559 Solanum tuberosum HOM05D004492 ORTHO05D005602 9.8e-34 147.5 189 41.3
ECA246G3183 Erigeron canadensis HOM05D004492 ORTHO05D005602 1.3e-33 147.1 188 41.5
SGA_v2.0_scaffold52G19008 Striga asiatica HOM05D004492 ORTHO05D005602 1.7e-33 146.7 184 40.8
Solyc06g060390.3 Solanum lycopersicum HOM05D004492 ORTHO05D005602 2.2e-33 146.4 189 41.3
BraA07t28100Z Brassica rapa HOM05D004492 ORTHO05D005602 3.7e-33 145.6 188 40.4
Rhsim11G0066100 Rhododendron simsii HOM05D004492 ORTHO05D005602 3.7e-33 145.6 211 39.3
Aa31LG9G14390 Aethionema arabicum HOM05D004492 ORTHO05D005602 6.3e-33 144.8 188 40.4
HanXRQChr05g0149221 Helianthus annuus HOM05D004492 ORTHO05D005602 6.3e-33 144.8 188 40.4
THA.LOC104813139 Tarenaya hassleriana HOM05D004492 ORTHO05D005602 6.3e-33 144.8 188 40.4
Actinidia29442 Actinidia chinensis HOM05D004492 ORTHO05D005602 8.3e-33 144.4 188 41.5
Ah.05g172340 Amaranthus hybridus HOM05D004492 ORTHO05D005602 8.3e-33 144.4 188 38.8
A07p03030 Brassica napus HOM05D004492 ORTHO05D005602 8.3e-33 144.4 188 39.4
MELO3C003048.2 Cucumis melo HOM05D004492 ORTHO05D005602 8.3e-33 144.4 203 39.4
Nitab4.5_0004882g0030 Nicotiana tabacum HOM05D004492 ORTHO05D005602 1.1e-32 144.1 188 40.4
EL10Ac1g00021 Beta vulgaris HOM05D004492 ORTHO05D005602 1.4e-32 143.7 188 40.4
AL3G50940 Arabidopsis lyrata HOM05D004492 ORTHO05D005602 1.8e-32 143.3 188 39.9
Carub.0003s3205 Capsella rubella HOM05D004492 ORTHO05D005602 2.4e-32 142.9 188 39.4
COL.COLO4_38233 Corchorus olitorius HOM05D004492 ORTHO05D005602 2.4e-32 142.9 169 42.6
AUR62004708 Chenopodium quinoa HOM05D004492 ORTHO05D005602 5.4e-32 141.7 164 46.3
AT2G17900 Arabidopsis thaliana HOM05D004492 ORTHO05D005602 9.1e-32 141.0 197 38.1
BcaC06g36340 Brassica carinata HOM05D004492 ORTHO05D005602 9.1e-32 141.0 188 39.4
C07p05160 Brassica napus HOM05D004492 ORTHO05D005602 9.1e-32 141.0 188 39.4
BolC7t40914H Brassica oleracea HOM05D004492 ORTHO05D005602 9.1e-32 141.0 188 39.4
PSO170G3797 Papaver somniferum HOM05D004492 ORTHO05D005602 9.1e-32 141.0 188 37.2
Thhalv10022664m.g Eutrema salsugineum HOM05D004492 ORTHO05D005602 1.6e-31 140.2 188 38.8
Sp3g31340 Schrenkiella parvula HOM05D004492 ORTHO05D005602 4.5e-31 138.7 188 39.4
unitig_46.g18495 Utricularia gibba HOM05D004492 ORTHO05D005602 7.7e-31 137.9 211 36.0
Cfa015974 Carpinus fangiana HOM05D004492 ORTHO05D005602 1.3e-30 137.1 164 43.3
FvH4_2g26271 Fragaria vesca HOM05D004492 ORTHO05D005602 2.9e-30 136.0 146 52.1
BcaB03g16570 Brassica carinata HOM05D004492 ORTHO05D005602 1.5e-29 133.7 189 37.6
CDE11G0913 Ceratophyllum demersum HOM05D004492 ORTHO05D005602 4.2e-29 132.1 187 38.0
ATR0684G004 Amborella trichopoda HOM05D004492 ORTHO05D005602 4.7e-28 128.6 194 35.6
Lsat_1_v5_gn_6_109160 Lactuca sativa HOM05D004492 ORTHO05D005602 8.0e-28 127.9 188 37.2
Glyma.06G109733 Glycine max HOM05D004492 ORTHO05D005602 1.8e-27 126.7 166 42.8
Glyma.04G252800 Glycine max HOM05D004492 ORTHO05D005602 4.0e-27 125.6 155 43.9
HPP92_009359 Vanilla planifolia HOM05D004492 ORTHO05D005602 1.5e-26 123.6 194 36.6
FAN15G0234 Fragaria x ananassa HOM05D004492 ORTHO05D005602 1.3e-25 120.6 150 46.7
Migut.C01177 Erythranthe guttata HOM05D004492 ORTHO05D005602 4.9e-25 118.6 185 34.6
Sabra05G0130600 Salix brachista HOM05D004492 ORTHO05D005602 6.3e-25 118.2 283 29.7
Dinv27371 Davidia involucrata HOM05D004492 ORTHO05D005602 1.8e-24 116.7 144 41.7
FAN27G1826 Fragaria x ananassa HOM05D004492 ORTHO05D005602 5.9e-23 111.7 66 80.3
Migut.C01176 Erythranthe guttata HOM05D004492 ORTHO05D005602 2.5e-21 106.3 187 31.6
Haze_00500 Corylus avellana HOM05D004492 ORTHO05D005602 2.8e-20 102.8 189 35.4
Pp3c19_7630 Physcomitrium patens HOM05D004492 ORTHO05D005602 1.4e-16 90.5 190 28.4
Hund27046 Selenicereus undatus HOM05D004492 ORTHO05D005602 1.4e-16 90.5 168 35.7
Zm00001eb393760 Zea mays HOM05D004492 ORTHO05D005602 3.2e-16 89.4 144 32.6
AUR62023625 Chenopodium quinoa HOM05D004492 ORTHO05D005602 5.9e-15 85.1 121 40.5
COL.COLO4_38232 Corchorus olitorius HOM05D004492 ORTHO05D005602 1.0e-14 84.3 167 32.9
AagrBONN_evm.TU.Sc2ySwM_344.3949 Anthoceros agrestis HOM05D004492 ORTHO05D005602 1.7e-14 83.6 188 29.3
Mapoly0101s0047 Marchantia polymorpha HOM05D004492 ORTHO05D005602 1.7e-14 83.6 190 29.5
COL.COLO4_38230 Corchorus olitorius HOM05D004492 ORTHO05D005602 5.0e-14 82.0 149 34.2
CANSAT11G0049 Cannabis sativa HOM05D004492 ORTHO05D005602 1.5e-13 80.5 62 61.3
SalBow7G0677 Salvia bowleyana HOM05D004492 ORTHO05D005602 1.6e-12 77.0 64 54.7
Hma1.2p1_0038F.1_g023980 Hydrangea macrophylla HOM05D004492 ORTHO05D005602 8.0e-12 74.7 123 35.8
Gohir.A02G074300 Gossypium hirsutum HOM05D004492 ORTHO05D005602 2.3e-11 73.2 57 54.4
SMO116G0295 Selaginella moellendorffii HOM05D004492 ORTHO05D005602 6.8e-11 71.6 192 24.5
Thecc.08G119300 Theobroma cacao HOM05D004492 ORTHO05D005602 2.2e-09 66.6 189 26.5
Zm00001eb216690 Zea mays HOM05D004492 ORTHO05D005602 4.1e-08 62.4 124 30.6
Solyc08g016560.3 Solanum lycopersicum HOM05D004492 ORTHO05D005602 5.4e-08 62.0 57 50.9
Thecc.08G118900 Theobroma cacao HOM05D004492 ORTHO05D005602 7.0e-08 61.6 189 24.3
Thecc.08G119200 Theobroma cacao HOM05D004492 ORTHO05D005602 9.2e-08 61.2 190 25.3
Zm00001eb002880 Zea mays HOM05D004492 ORTHO05D005602 2.0e-07 60.1 57 47.4
Solyc05g040060.1 Solanum lycopersicum HOM05D004492 ORTHO05D005602 3.5e-07 59.3 57 49.1
FvH4_2g26270 Fragaria vesca HOM05D004492 ORTHO05D005602 6.0e-07 58.5 30 76.7
SEGI_10642 Sequoiadendron giganteum HOM05D004492 ORTHO05D005602 7.8e-07 58.2 105 31.4
Solyc01g034050.1 Solanum lycopersicum HOM05D004492 ORTHO05D005602 1.7e-06 57.0 57 50.9


User provided reference genes

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