Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 9.2e-60 233.4 122 100.0
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.2e-51 206.5 121 91.7
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.2e-51 206.5 121 91.7
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 8.6e-50 200.3 122 90.2
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.4e-39 166.4 125 79.2
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 2.3e-39 165.6 122 78.7
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.0e-38 162.5 121 79.3
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.4e-38 161.8 125 79.2
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 5.4e-28 127.9 121 62.0
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 5.4e-28 127.9 120 66.7
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 1.3e-24 116.7 117 59.8
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 4.8e-24 114.8 121 59.5
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 6.2e-24 114.4 127 59.8
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 2.4e-23 112.5 122 59.0
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 1.3e-21 106.7 119 55.5
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 2.2e-21 105.9 121 59.5
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 4.9e-21 104.8 119 57.1
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 4.2e-20 101.7 118 58.5
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.2e-19 100.1 119 53.8
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.2e-19 100.1 119 55.5
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 1.2e-19 100.1 119 55.5
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.6e-19 99.8 119 54.6
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.0e-18 97.1 116 53.4
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.7e-18 96.3 119 52.1
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 3.0e-18 95.5 122 50.8
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 3.0e-18 95.5 121 53.7
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.5e-17 93.2 120 54.2
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.9e-17 92.8 115 53.9
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 4.3e-17 91.7 120 52.5
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 9.6e-17 90.5 116 57.8
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 4.8e-16 88.2 113 52.2
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.1e-15 87.0 123 48.8
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.4e-15 85.9 116 49.1
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 3.1e-15 85.5 117 49.6
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 3.1e-15 85.5 123 48.8
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 6.9e-15 84.3 117 46.2
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 2.0e-14 82.8 119 49.6
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 2.0e-14 82.8 123 48.8
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 4.5e-14 81.6 100 51.0
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 7.6e-14 80.9 103 51.5
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.7e-13 79.7 117 51.3
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 2.2e-13 79.3 118 49.2
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 8.4e-13 77.4 124 43.5
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.1e-12 77.0 132 43.9
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 1.4e-12 76.6 119 44.5
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 2.4e-12 75.9 137 45.3
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 4.2e-12 75.1 119 43.7
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 2.7e-11 72.4 118 46.6
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 4.6e-11 71.6 115 43.5
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 4.6e-11 71.6 103 47.6
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 8.7e-10 67.4 117 42.7
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 1.9e-09 66.2 102 46.1
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 1.6e-08 63.2 119 43.7
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.6e-08 63.2 120 43.3
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.6e-08 63.2 118 42.4
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 4.8e-08 61.6 105 42.9
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 6.2e-08 61.2 115 41.7
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 1.4e-07 60.1 121 42.1
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.4e-07 59.3 118 41.5
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 2.4e-07 59.3 160 34.4
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 4.0e-07 58.5 120 40.8
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 4.0e-07 58.5 124 41.1
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 4.0e-07 58.5 124 41.1
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 5.3e-07 58.2 112 40.2
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.2e-06 57.0 107 36.4
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 1.5e-06 56.6 118 40.7
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 2.0e-06 56.2 65 58.5
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 2.6e-06 55.8 119 37.8
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 3.4e-06 55.5 113 39.8
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 7.6e-06 54.3 71 45.1
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 7.6e-06 54.3 86 44.2
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 7.6e-06 54.3 124 37.1
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 1.0e-05 53.9 108 41.7


User provided reference genes

Program Settings