Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 1.0e-64 250.0 132 100.0
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 8.7e-64 246.9 132 97.7
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 5.8e-60 234.2 132 92.4
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 3.0e-48 195.3 132 77.3
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 5.1e-48 194.5 132 77.3
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 1.5e-39 166.4 132 66.7
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 1.3e-38 163.3 133 66.9
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 1.1e-37 160.2 148 64.2
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 3.1e-37 158.7 135 65.9
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 5.9e-36 154.5 146 62.3
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 7.6e-36 154.1 135 64.4
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.7e-35 152.9 139 64.0
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 3.8e-35 151.8 136 63.2
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 3.8e-35 151.8 133 59.4
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 6.5e-35 151.0 134 66.4
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.9e-34 149.4 147 57.8
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.5e-34 149.1 147 57.8
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 3.2e-34 148.7 124 63.7
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 7.2e-34 147.5 141 61.7
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 2.7e-33 145.6 140 60.7
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 7.9e-33 144.1 132 61.4
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 7.9e-33 144.1 136 63.2
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 1.1e-31 140.2 135 61.5
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 3.3e-31 138.7 133 58.6
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 3.3e-31 138.7 133 58.6
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 3.3e-31 138.7 133 57.1
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 7.4e-31 137.5 136 58.8
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.3e-30 136.7 145 59.3
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 2.2e-30 136.0 127 56.7
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 2.8e-30 135.6 175 49.7
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 3.7e-30 135.2 136 60.3
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 4.8e-30 134.8 137 57.7
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 4.8e-30 134.8 124 56.5
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 1.1e-29 133.7 133 54.1
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 1.4e-29 133.3 133 56.4
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 2.4e-29 132.5 133 56.4
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 4.1e-29 131.7 123 61.8
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 6.9e-29 131.0 128 58.6
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 6.9e-29 131.0 133 54.9
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 9.1e-29 130.6 127 56.7
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 2.0e-28 129.4 127 55.9
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 2.6e-28 129.0 123 60.2
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 2.6e-28 129.0 135 57.0
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 4.5e-28 128.3 119 61.3
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 1.3e-27 126.7 129 55.8
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 1.7e-27 126.3 87 71.3
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 5.0e-27 124.8 123 55.3
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 5.0e-27 124.8 136 54.4
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.2e-26 122.1 138 53.6
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 4.2e-26 121.7 134 53.7
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 4.2e-26 121.7 134 53.7
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 7.2e-26 120.9 131 56.5
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 9.4e-26 120.6 138 53.6
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 1.6e-25 119.8 95 64.2
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 2.1e-25 119.4 134 52.2
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 2.1e-25 119.4 134 53.0
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 3.6e-25 118.6 120 55.0
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.0e-24 117.1 125 55.2
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.0e-24 117.1 124 51.6
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 1.4e-24 116.7 134 52.2
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.8e-24 116.3 125 55.2
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 5.1e-24 114.8 129 55.8
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 5.1e-24 114.8 115 55.7
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 8.8e-24 114.0 126 55.6
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 1.1e-23 113.6 115 54.8
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 2.6e-23 112.5 130 53.8
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 5.7e-23 111.3 120 55.0
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 5.7e-23 111.3 131 49.6
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 3.7e-22 108.6 130 50.0
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 1.1e-21 107.1 135 51.9
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 2.4e-21 105.9 127 52.0
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 6.9e-21 104.4 123 50.4
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 1.2e-20 103.6 119 49.6
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.5e-20 103.2 163 43.6
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 2.6e-20 102.4 68 76.5
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 3.4e-20 102.1 125 48.8
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 7.7e-20 100.9 89 62.9
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 1.0e-19 100.5 80 63.8
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 1.3e-19 100.1 73 68.5
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 2.2e-19 99.4 87 59.8
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 2.9e-19 99.0 126 47.6
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 1.9e-18 96.3 125 50.4
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 2.5e-18 95.9 86 61.6
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.2e-17 93.6 123 46.3
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.2e-17 93.6 123 46.3
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 3.6e-17 92.0 89 62.9
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 3.9e-16 88.6 63 63.5
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 5.2e-16 88.2 60 66.7
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 6.7e-16 87.8 59 67.8
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 1.1e-15 87.0 67 59.7
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 1.7e-14 83.2 86 53.5
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.2e-14 82.8 85 61.2
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 2.2e-14 82.8 81 54.3
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 9.1e-13 77.4 58 63.8
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 4.5e-12 75.1 89 46.1
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 5.9e-12 74.7 90 47.8
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 1.1e-10 70.5 106 40.6
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 2.7e-09 65.9 124 39.5
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 2.3e-08 62.8 46 67.4
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 6.3e-06 54.7 73 35.6


User provided reference genes

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