Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 1.2e-88 329.7 158 100.0
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 3.9e-87 324.7 158 98.7
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 5.7e-86 320.9 158 97.5
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 1.3e-85 319.7 158 96.2
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.8e-84 315.8 158 96.2
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 6.9e-84 313.9 157 94.3
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 5.7e-70 267.7 154 81.8
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 7.4e-70 267.3 143 86.0
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 4.1e-68 261.5 157 79.0
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 1.7e-66 256.1 158 75.9
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 8.5e-66 253.8 158 75.9
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 1.9e-65 252.7 155 78.7
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 7.2e-65 250.8 143 80.4
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 1.6e-64 249.6 152 75.7
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 2.7e-64 248.8 155 73.5
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 2.3e-63 245.7 158 75.9
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 8.8e-63 243.8 158 74.1
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.1e-62 243.4 142 77.5
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 3.3e-62 241.9 143 76.9
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 3.3e-62 241.9 142 75.4
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 7.4e-62 240.7 155 74.2
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 9.7e-62 240.4 159 71.7
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 1.7e-61 239.6 143 74.8
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 2.8e-61 238.8 154 72.1
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 4.8e-61 238.0 149 71.8
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 6.3e-61 237.7 155 73.5
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 6.3e-61 237.7 154 72.1
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 8.2e-61 237.3 154 72.1
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 8.2e-61 237.3 154 72.1
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 1.4e-60 236.5 129 83.7
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 1.4e-60 236.5 150 72.0
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 1.4e-60 236.5 149 73.2
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 1.8e-60 236.1 146 74.0
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 1.8e-60 236.1 151 71.5
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 4.1e-60 235.0 143 74.8
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 4.1e-60 235.0 145 73.8
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 5.3e-60 234.6 160 68.1
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 7.0e-60 234.2 144 77.1
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 7.0e-60 234.2 140 71.4
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 9.1e-60 233.8 144 74.3
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 1.6e-59 233.0 152 72.4
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 2.0e-59 232.6 154 70.8
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 2.0e-59 232.6 154 70.8
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 2.0e-59 232.6 154 70.8
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 2.0e-59 232.6 155 71.6
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 2.0e-59 232.6 152 72.4
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 2.6e-59 232.3 143 76.9
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 3.5e-59 231.9 150 73.3
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 4.5e-59 231.5 152 71.7
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 4.5e-59 231.5 155 71.0
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 1.3e-58 229.9 159 71.1
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 1.3e-58 229.9 153 68.0
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 2.2e-58 229.2 159 69.2
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 2.9e-58 228.8 145 73.8
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 6.5e-58 227.6 149 68.5
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 8.5e-58 227.3 143 72.7
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 1.1e-57 226.9 143 72.7
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 1.1e-57 226.9 139 73.4
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 1.5e-57 226.5 150 71.3
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 1.5e-57 226.5 142 76.8
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 1.9e-57 226.1 143 74.1
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 2.5e-57 225.7 145 72.4
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 3.2e-57 225.3 139 71.9
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 4.2e-57 224.9 161 65.2
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 5.5e-57 224.6 143 71.3
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 1.6e-56 223.0 152 67.8
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 3.6e-56 221.9 143 72.7
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 3.6e-56 221.9 146 71.9
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 1.8e-55 219.5 142 73.9
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 2.3e-55 219.2 153 66.7
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 2.3e-55 219.2 143 73.4
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 3.0e-55 218.8 144 73.6
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 6.7e-55 217.6 153 67.3
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 8.8e-55 217.2 151 69.5
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 8.8e-55 217.2 142 72.5
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 2.6e-54 215.7 143 71.3
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 3.3e-54 215.3 145 70.3
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 4.8e-53 211.5 139 67.6
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 7.7e-51 204.1 146 70.5
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 1.7e-50 203.0 139 69.1
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 6.5e-50 201.1 139 66.2
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 6.5e-50 201.1 139 66.2
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 8.5e-50 200.7 137 72.3
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 1.9e-49 199.5 141 63.8
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 7.2e-49 197.6 142 68.3
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 5.2e-47 191.4 141 64.5
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 1.8e-44 183.0 134 60.4
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 4.1e-44 181.8 146 57.5
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 4.1e-44 181.8 146 57.5
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 4.2e-41 171.8 157 58.0
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.6e-40 169.9 139 59.0
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 4.7e-40 168.3 107 69.2
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 1.4e-39 166.8 148 60.1
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 2.0e-38 162.9 135 53.3
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 1.8e-36 156.4 143 53.8
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 2.7e-35 152.5 133 52.6
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 2.3e-34 149.4 133 51.1
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 5.0e-34 148.3 134 51.5
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 1.9e-33 146.4 106 67.0
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 2.5e-33 146.0 133 53.4
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 5.6e-33 144.8 105 66.7
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 5.6e-33 144.8 144 51.4
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 4.7e-32 141.7 144 51.4
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 1.4e-31 140.2 94 67.0
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 3.0e-31 139.0 108 63.9
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 2.7e-27 125.9 138 47.1
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 1.5e-22 110.2 120 48.3
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 2.6e-22 109.4 73 72.6
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 2.2e-21 106.3 104 54.8
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 2.3e-18 96.3 103 50.5
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 1.9e-17 93.2 157 36.3
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 3.3e-17 92.4 158 37.3


User provided reference genes

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