Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 0.0e+00 1457.6 830 100.0
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 0.0e+00 1438.3 825 99.4
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 0.0e+00 1342.8 831 92.9
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 0.0e+00 1333.9 832 92.2
FAN15G3289 Fragaria x ananassa HOM05D004628 ORTHO05D005166 0.0e+00 1303.5 815 91.7
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 1.3e-250 870.2 848 67.9
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 9.1e-143 511.9 909 46.4
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 9.5e-100 369.0 912 38.3
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 9.5e-100 369.0 912 38.3
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 1.9e-87 328.2 1011 35.1
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 4.1e-87 327.0 913 35.0
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 1.6e-86 325.1 941 35.7
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 1.0e-85 322.4 865 37.1
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 1.5e-84 318.5 941 38.2
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 7.3e-84 316.2 892 35.3
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 1.5e-81 308.5 964 35.4
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 2.9e-80 304.3 897 35.1
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 6.4e-80 303.1 947 33.2
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 7.1e-79 299.7 939 34.9
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 4.3e-76 290.4 857 35.2
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 4.8e-75 287.0 891 33.9
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 5.3e-74 283.5 904 34.0
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 5.8e-73 280.0 915 33.1
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 1.4e-71 275.4 902 33.1
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 3.2e-71 274.2 936 34.8
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 4.6e-70 270.4 959 32.6
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 6.0e-70 270.0 977 33.6
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 4.3e-68 263.8 902 33.8
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 2.1e-67 261.5 917 32.6
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea HOM05D004628 ORTHO05D005166 4.8e-67 260.4 929 31.6
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 6.2e-67 260.0 913 32.3
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 6.2e-67 260.0 931 31.7
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 8.1e-67 259.6 898 33.7
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 1.4e-66 258.8 944 32.6
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 5.3e-66 256.9 938 33.9
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 6.9e-66 256.5 887 32.6
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 3.4e-65 254.2 893 32.9
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 1.3e-64 252.3 926 31.4
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 2.9e-64 251.1 915 31.9
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 4.9e-64 250.4 907 32.4
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 5.5e-63 246.9 911 33.9
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 5.5e-63 246.9 903 34.0
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 2.7e-62 244.6 876 33.2
Manes.07G052400 Manihot esculenta HOM05D004628 ORTHO05D005166 1.8e-61 241.9 932 31.9
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 8.7e-61 239.6 834 33.2
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea HOM05D004628 ORTHO05D005166 2.1e-59 235.0 968 32.4
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 3.1e-58 231.1 896 33.6
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 5.3e-58 230.3 952 31.7
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 1.0e-56 226.1 878 33.5
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 3.8e-56 224.2 888 31.1
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 4.9e-56 223.8 355 50.7
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 1.4e-55 222.2 889 31.4
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 1.9e-55 221.9 919 30.5
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 4.2e-55 220.7 875 32.8
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 5.5e-55 220.3 882 32.0
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 7.1e-55 219.9 933 33.9
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 1.0e-53 216.1 976 30.1
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 1.8e-53 215.3 964 32.3
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea HOM05D004628 ORTHO05D005166 3.9e-53 214.2 974 30.0
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 5.1e-53 213.8 1025 31.1
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 3.3e-52 211.1 835 32.5
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 5.7e-52 210.3 804 34.6
Ca_21082_v3 Cicer arietinum L. HOM05D004628 ORTHO05D005166 3.7e-51 207.6 960 29.7
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 1.2e-49 202.6 942 30.8
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.5e-49 202.2 911 32.6
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.3e-48 199.1 841 31.6
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 1.7e-48 198.7 919 29.7
FAN09G3722 Fragaria x ananassa HOM05D004628 ORTHO05D005166 3.8e-48 197.6 129 80.6
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 6.5e-48 196.8 919 32.5
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 1.1e-47 196.1 870 29.7
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 2.5e-47 194.9 845 31.0
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 3.2e-47 194.5 845 31.0
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 1.0e-45 189.5 970 30.6
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 6.7e-45 186.8 906 29.1
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 9.7e-44 183.0 837 30.0
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 1.6e-43 182.2 873 29.0
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 2.2e-43 181.8 937 31.2
FvH4_6g23772 Fragaria vesca HOM05D004628 ORTHO05D005166 4.8e-43 180.6 220 54.1
Lalb_Chr15g0087631 Lupinus albus HOM05D004628 ORTHO05D005166 1.5e-41 175.6 1001 27.5
Psat4g006640 Pisum sativum HOM05D004628 ORTHO05D005166 3.4e-41 174.5 1023 27.3
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 7.7e-41 173.3 943 29.9
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 1.0e-40 172.9 893 28.8
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 2.5e-39 168.3 913 30.1
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 9.4e-39 166.4 905 28.1
THA.LOC104819526 Tarenaya hassleriana HOM05D004628 ORTHO05D005166 2.7e-38 164.9 924 29.1
AT2G16270 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 6.1e-38 163.7 855 28.7
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 6.7e-37 160.2 855 29.6
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 8.8e-37 159.8 935 28.1
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 1.5e-36 159.1 830 29.2
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 4.3e-36 157.5 907 29.0
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 7.4e-36 156.8 853 27.8
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 3.7e-35 154.5 380 38.2
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 4.1e-34 151.0 877 28.6
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 5.3e-34 150.6 893 28.0
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 9.1e-34 149.8 851 28.7
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 2.6e-33 148.3 861 29.5
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 7.7e-33 146.7 857 29.3
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 1.7e-32 145.6 875 26.9
Sp3g29460 Schrenkiella parvula HOM05D004628 ORTHO05D005166 3.8e-32 144.4 958 27.8
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 6.5e-32 143.7 851 29.3
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 8.5e-32 143.3 848 27.8
AL1G28790 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 1.9e-31 142.1 893 27.3
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 3.2e-31 141.4 847 27.9
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 5.5e-31 140.6 824 28.2
AT1G16630 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 1.2e-30 139.4 905 28.4
CARHR017100 Cardamine hirsuta HOM05D004628 ORTHO05D005166 1.2e-30 139.4 536 31.5
Carub.0001s1637 Capsella rubella HOM05D004628 ORTHO05D005166 2.1e-30 138.7 919 26.9
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 7.9e-30 136.7 918 29.6
PSO447G0365 Papaver somniferum HOM05D004628 ORTHO05D005166 4.4e-28 131.0 952 26.9
Thhalv10006806m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 5.7e-28 130.6 883 27.9
PSO210G3573 Papaver somniferum HOM05D004628 ORTHO05D005166 4.8e-27 127.5 912 27.9
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 6.3e-27 127.1 836 25.7
C05p14910 Brassica napus HOM05D004628 ORTHO05D005166 9.1e-26 123.2 906 26.9
GSVIVG01037037001 Vitis vinifera HOM05D004628 ORTHO05D005166 7.7e-25 120.2 179 52.5
Sp1g14770 Schrenkiella parvula HOM05D004628 ORTHO05D005166 5.0e-24 117.5 902 26.5
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 3.2e-23 114.8 947 27.1
A06p12620 Brassica napus HOM05D004628 ORTHO05D005166 9.4e-23 113.2 911 25.2
BraA06t24423Z Brassica rapa HOM05D004628 ORTHO05D005166 2.7e-22 111.7 923 26.4
unitig_744.g24202 Utricularia gibba HOM05D004628 ORTHO05D005166 1.1e-20 106.3 784 24.9
arahy.Tifrunner.gnm1.ann1.53VTV0 Arachis hypogaea HOM05D004628 ORTHO05D005166 1.7e-19 102.4 281 36.7
BolC5t30206H Brassica oleracea HOM05D004628 ORTHO05D005166 1.7e-19 102.4 898 27.2
Psat6g212600 Pisum sativum HOM05D004628 ORTHO05D005166 6.3e-19 100.5 330 34.5
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 8.2e-19 100.1 304 32.2
HPP92_001855 Vanilla planifolia HOM05D004628 ORTHO05D005166 1.4e-18 99.4 880 26.5
Lsat_1_v5_gn_5_129280 Lactuca sativa HOM05D004628 ORTHO05D005166 3.1e-18 98.2 248 36.7
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 1.2e-17 96.3 911 24.1
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 2.2e-16 92.0 183 41.0
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 1.6e-14 85.9 81 58.0
CAN.G1627.6 Capsicum annuum HOM05D004628 ORTHO05D005166 2.3e-13 82.0 91 54.9
Nitab4.5_0008331g0010 Nicotiana tabacum HOM05D004628 ORTHO05D005166 9.8e-12 76.6 96 53.1
Psat5g077040 Pisum sativum HOM05D004628 ORTHO05D005166 1.3e-11 76.3 131 44.3
BcaC05g25526 Brassica carinata HOM05D004628 ORTHO05D005166 6.3e-11 73.9 965 25.2
Psat0ss6263g0240 Pisum sativum HOM05D004165 ORTHO05D005166 1.4e-10 72.8 71 57.7
arahy.Tifrunner.gnm1.ann1.GD5ZZG Arachis hypogaea HOM05D004628 ORTHO05D005166 4.1e-10 71.2 134 47.0
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 9.1e-10 70.1 219 32.4
Nitab4.5_0000575g0060 Nicotiana tabacum HOM05D004628 ORTHO05D005166 2.0e-09 68.9 88 53.4
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 7.7e-09 67.0 219 32.4
CAN.G1164.3 Capsicum annuum HOM05D009846 ORTHO05D002235 1.0e-08 66.6 118 39.0
CAN.G289.65 Capsicum annuum HOM05D004628 ORTHO05D005166 1.7e-08 65.9 267 30.7
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 1.7e-08 65.9 285 32.3
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 3.8e-08 64.7 220 31.8
Os03g0672400 Oryza sativa ssp. japonica HOM05D058439 ORTHO05D005166 3.8e-08 64.7 860 24.1
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 1.1e-07 63.2 228 32.9
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 4.2e-07 61.2 191 31.9
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 4.2e-07 61.2 210 31.9
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 9.4e-07 60.1 272 27.6
ATR0767G029 Amborella trichopoda HOM05D004628 ORTHO05D005166 1.2e-06 59.7 772 23.2
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 1.2e-06 59.7 266 27.8
CAN.G289.57 Capsicum annuum HOM05D004628 ORTHO05D005166 1.6e-06 59.3 179 36.9
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 2.1e-06 58.9 206 32.0
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 4.7e-06 57.8 226 32.7
CAN.G1627.4 Capsicum annuum HOM05D004628 ORTHO05D005166 8.0e-06 57.0 36 75.0


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