Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g02661 Fragaria vesca HOM05D008382 ORTHO05D009660 3.9e-54 214.5 107 100.0
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 2.2e-17 92.4 142 42.3
CSS0011613 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D009660 2.5e-13 79.0 72 54.2
PGR083G0982 Punica granatum HOM05D000004 ORTHO05D000002 7.4e-13 77.4 65 60.0
Actinidia10157 Actinidia chinensis HOM05D000124 ORTHO05D009660 1.1e-11 73.6 41 75.6
MBI18_g26690_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 1.1e-11 73.6 47 72.3
MBI05_g17915_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 1.4e-11 73.2 41 78.0
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 3.1e-11 72.0 41 75.6
PSO541G3038 Papaver somniferum HOM05D000004 ORTHO05D000563 5.3e-11 71.2 41 68.3
PGR083G1481 Punica granatum HOM05D000004 ORTHO05D000002 5.3e-11 71.2 41 68.3
Eucgr.L00350 Eucalyptus grandis HOM05D000018 ORTHO05D000453 4.5e-10 68.2 41 70.7
PGR102G0017 Punica granatum HOM05D000004 ORTHO05D000002 4.5e-10 68.2 68 51.5
PSO063G2514 Papaver somniferum HOM05D000004 ORTHO05D000002 5.8e-10 67.8 41 70.7
PSO170G4300 Papaver somniferum HOM05D000004 ORTHO05D000002 5.8e-10 67.8 41 65.9
PSO675G7964 Papaver somniferum HOM05D000004 ORTHO05D000002 5.8e-10 67.8 41 68.3
PSO017G0752 Papaver somniferum HOM05D000004 ORTHO05D000002 7.6e-10 67.4 41 68.3
PSO063G0930 Papaver somniferum HOM05D000004 ORTHO05D000002 7.6e-10 67.4 41 68.3
MBI10_g05543_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 1.0e-09 67.0 41 73.2
PSO339G5592 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-09 67.0 41 65.9
PSO170G4806 Papaver somniferum HOM05D000004 ORTHO05D000563 1.3e-09 66.6 41 70.7
PSO832G1458 Papaver somniferum HOM05D000004 ORTHO05D009660 1.3e-09 66.6 41 65.9
TWI77G0626 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.3e-09 66.6 68 50.0
PSO832G1137 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-09 66.2 41 63.4
Atru.chr6.2464 Acer truncatum HOM05D000004 ORTHO05D000563 2.2e-09 65.9 40 70.0
Manes.16G058925 Manihot esculenta HOM05D000004 ORTHO05D000002 2.9e-09 65.5 44 63.6
PSO017G7238 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-09 65.5 41 65.9
PSO063G7224 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-09 65.5 41 65.9
PSO339G2721 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-09 65.5 41 65.9
PGR119G2216 Punica granatum HOM05D000004 ORTHO05D000563 2.9e-09 65.5 68 50.0
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 2.9e-09 65.5 41 68.3
ClCG09G013120 Citrullus lanatus HOM05D000004 ORTHO05D009660 3.8e-09 65.1 43 60.5
PSO063G1779 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-09 65.1 41 65.9
PSO170G1357 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-09 65.1 41 65.9
Manes.10G049950 Manihot esculenta HOM05D000004 ORTHO05D000002 4.9e-09 64.7 43 65.1
MBI03_g28299_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 6.5e-09 64.3 41 75.6
PSO339G0871 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-09 64.3 41 65.9
PSO339G1289 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-09 64.3 40 65.0
PSO761G0440 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-09 64.3 41 65.9
PSO063G2046 Papaver somniferum HOM05D000004 ORTHO05D000002 8.4e-09 63.9 41 65.9
PSO781G0082 Papaver somniferum HOM05D000004 ORTHO05D000002 8.4e-09 63.9 41 63.4
Prupe.7G034800 Prunus persica HOM05D000004 ORTHO05D000563 8.4e-09 63.9 41 63.4
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 8.4e-09 63.9 41 65.9
Dinv06798 Davidia involucrata HOM05D000004 ORTHO05D000563 1.1e-08 63.5 41 63.4
PGR083G2793 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-08 63.2 41 68.3
TAR694G0001 Trochodendron aralioides HOM05D000374 ORTHO05D000238 1.4e-08 63.2 34 82.4
CiPaw.05G240600 Carya illinoinensis HOM05D008382 ORTHO05D009660 1.9e-08 62.8 66 53.0
PSO675G1879 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-08 62.8 41 65.9
FvH4_2g17921 Fragaria vesca HOM05D008382 ORTHO05D009660 2.5e-08 62.4 145 29.7
MBI14_g25893_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 4.2e-08 61.6 33 84.8
PSO063G5223 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-08 61.6 41 63.4
PSO675G2557 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-08 61.2 41 58.5
PGR102G1257 Punica granatum HOM05D000004 ORTHO05D000002 5.5e-08 61.2 41 65.9
Atru.chr6.120 Acer truncatum HOM05D000004 ORTHO05D009660 7.1e-08 60.8 42 61.9
PGR002G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-08 60.8 41 65.9
TWI60G1627 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 9.3e-08 60.5 41 61.0
Hma1.2p1_1067F.1_g253920 Hydrangea macrophylla HOM05D000004 ORTHO05D009660 1.2e-07 60.1 71 46.5
QL09p008068 Quercus lobata HOM05D000004 ORTHO05D009660 1.2e-07 60.1 44 56.8
PSO732G0311 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-07 59.7 41 61.0
CAN.G249.16 Capsicum annuum HOM05D008382 ORTHO05D009660 2.1e-07 59.3 40 62.5
FvH4_3g40201 Fragaria vesca HOM05D000004 ORTHO05D000002 2.1e-07 59.3 144 29.2
Nn6g33985 Nelumbo nucifera HOM05D013991 ORTHO05D009660 2.1e-07 59.3 38 68.4
PGR142G2802 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-07 59.3 74 48.6
Hma1.2p1_0314F.1_g122100 Hydrangea macrophylla HOM05D000004 ORTHO05D009927 2.7e-07 58.9 41 58.5
Dinv17484 Davidia involucrata HOM05D000004 ORTHO05D000563 3.5e-07 58.5 41 61.0
FvH4_6g32371 Fragaria vesca HOM05D008382 ORTHO05D011503 3.5e-07 58.5 41 56.1
Hma1.2p1_0253F.1_g103130 Hydrangea macrophylla HOM05D000004 ORTHO05D000563 3.5e-07 58.5 41 61.0
Hma1.2p1_2925F.1_g330460 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.5e-07 58.5 73 43.8
Sabra11G0010700 Salix brachista HOM05D000004 ORTHO05D009927 3.5e-07 58.5 41 63.4
Hund20088 Selenicereus undatus HOM05D000004 ORTHO05D000563 3.5e-07 58.5 42 64.3
CiPaw.14G083400 Carya illinoinensis HOM05D000004 ORTHO05D000563 4.6e-07 58.2 41 58.5
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 4.6e-07 58.2 65 41.5
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 4.6e-07 58.2 65 41.5
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 4.6e-07 58.2 65 41.5
PGR083G2455 Punica granatum HOM05D000004 ORTHO05D000002 4.6e-07 58.2 41 65.9
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 4.6e-07 58.2 41 53.7
Hund17465 Selenicereus undatus HOM05D008980 ORTHO05D016385 4.6e-07 58.2 42 64.3
Hund19909 Selenicereus undatus HOM05D008634 ORTHO05D000695 4.6e-07 58.2 42 61.9
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 4.6e-07 58.2 41 53.7
ECA240G4601 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.0e-07 57.8 64 39.1
Potri.003G026106 Populus trichocarpa HOM05D028484 ORTHO05D000002 7.9e-07 57.4 41 53.7
FvH4_2g19251 Fragaria vesca HOM05D000004 ORTHO05D000563 1.0e-06 57.0 41 58.5
Hund10392 Selenicereus undatus HOM05D013854 ORTHO05D000563 1.0e-06 57.0 42 59.5
ClCG10G011900 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.3e-06 56.6 41 63.4
ECA246G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 56.6 64 39.1
Medtr7g105270 Medicago truncatula HOM05D000004 ORTHO05D000002 1.3e-06 56.6 41 61.0
PSO832G2392 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-06 56.6 47 53.2
ECA238G1029 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-06 56.2 47 55.3
ECA246G4319 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-06 56.2 69 39.1
Medtr4g102460 Medicago truncatula HOM05D000004 ORTHO05D000002 1.8e-06 56.2 41 56.1
Thecc.05G102300 Theobroma cacao HOM05D000004 ORTHO05D000563 1.8e-06 56.2 41 61.0
FvH4_4g12742 Fragaria vesca HOM05D000004 ORTHO05D000002 2.3e-06 55.8 75 44.0
FvH4_4g14286 Fragaria vesca HOM05D008382 ORTHO05D000563 2.3e-06 55.8 41 53.7
Hund08493 Selenicereus undatus HOM05D008980 ORTHO05D000563 2.3e-06 55.8 42 59.5
Hund23938 Selenicereus undatus HOM05D000004 ORTHO05D000563 2.3e-06 55.8 42 59.5
ECA246G2687 Erigeron canadensis HOM05D000321 ORTHO05D000002 3.0e-06 55.5 64 40.6
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 3.0e-06 55.5 65 40.0
RcHm_v2.0_Chr7g0227361 Rosa chinensis HOM05D000038 ORTHO05D030549 3.0e-06 55.5 41 53.7
EL10Ac2g03748 Beta vulgaris HOM05D000004 ORTHO05D000002 3.9e-06 55.1 41 51.2
ClCG11G010970 Citrullus lanatus HOM05D000004 ORTHO05D000002 3.9e-06 55.1 49 51.0
ECA238G1641 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.9e-06 55.1 64 37.5
Medtr6g033835 Medicago truncatula HOM05D008382 ORTHO05D009660 3.9e-06 55.1 43 53.5
Atru.chr9.539 Acer truncatum HOM05D000004 ORTHO05D000563 5.1e-06 54.7 41 51.2
EL10As2g23215 Beta vulgaris HOM05D008382 ORTHO05D000002 5.1e-06 54.7 41 51.2
HanXRQChr10g0318501 Helianthus annuus HOM05D000004 ORTHO05D000002 5.1e-06 54.7 47 53.2
Medtr1g027170 Medicago truncatula HOM05D008382 ORTHO05D011503 5.1e-06 54.7 42 52.4
Thecc.01G105600 Theobroma cacao HOM05D000004 ORTHO05D000563 5.1e-06 54.7 94 37.2
ECA236G3294 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.7e-06 54.3 47 55.3
Potri.001G006850 Populus trichocarpa HOM05D028484 ORTHO05D000563 6.7e-06 54.3 73 39.7
SEGI_30488 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 8.7e-06 53.9 51 47.1


User provided reference genes

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