Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 1.3e-232 809.3 392 100.0
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.2e-230 802.7 392 99.5
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.5e-224 780.4 390 97.4
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.2e-222 776.2 415 92.3
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 2.8e-211 738.4 398 90.5
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 7.7e-193 677.2 323 98.1
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 2.7e-190 668.7 416 80.0
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 1.6e-185 652.9 380 82.6
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 2.8e-179 632.1 390 78.5
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 4.5e-177 624.8 358 81.8
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 7.7e-177 624.0 393 77.6
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.0e-176 623.6 389 77.6
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 1.1e-175 620.2 386 77.5
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 5.6e-175 617.8 364 80.8
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 7.3e-175 617.5 408 73.5
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 7.3e-175 617.5 325 85.5
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 9.5e-175 617.1 351 80.3
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 9.5e-175 617.1 389 76.6
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 2.8e-174 615.5 387 76.2
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 3.6e-174 615.1 387 76.7
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 4.7e-174 614.8 336 82.7
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 1.0e-173 613.6 396 75.0
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.0e-173 613.6 384 77.1
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.8e-173 612.8 363 79.1
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 5.2e-173 611.3 395 75.2
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 8.9e-173 610.5 334 83.5
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 8.9e-173 610.5 380 76.8
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.2e-172 610.1 323 85.8
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 1.2e-172 610.1 376 75.3
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 2.6e-172 609.0 388 75.8
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 3.4e-172 608.6 382 77.0
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 4.4e-172 608.2 380 76.3
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 5.7e-172 607.8 380 76.3
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 7.5e-172 607.4 338 83.1
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 9.8e-172 607.1 393 74.8
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 2.9e-171 605.5 373 77.5
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 4.9e-171 604.7 378 76.2
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 8.3e-171 604.0 325 84.3
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 8.3e-171 604.0 373 77.2
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.1e-170 603.6 332 82.8
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.1e-170 603.6 334 82.0
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 1.4e-170 603.2 337 83.1
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 1.4e-170 603.2 323 84.5
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 1.4e-170 603.2 351 79.8
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.8e-170 602.8 347 81.0
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 2.4e-170 602.4 352 79.0
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 3.2e-170 602.1 372 76.3
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 9.2e-170 600.5 331 82.5
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.6e-169 599.7 394 73.1
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 5.9e-169 597.8 389 74.3
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 7.8e-169 597.4 392 73.0
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.0e-168 597.0 395 72.2
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 1.3e-168 596.7 325 83.4
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.3e-168 596.7 334 82.3
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.3e-168 596.7 376 75.0
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.3e-168 596.7 384 73.4
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.7e-168 596.3 324 83.6
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 1.7e-168 596.3 324 83.6
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 2.3e-168 595.9 383 75.5
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 3.0e-168 595.5 392 73.2
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 8.6e-168 594.0 393 71.8
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 2.5e-167 592.4 313 84.7
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 4.3e-167 591.7 378 75.1
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 4.3e-167 591.7 380 74.5
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 7.3e-167 590.9 375 73.6
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 9.5e-167 590.5 365 77.0
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 1.2e-166 590.1 366 76.5
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.6e-166 589.7 352 77.3
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 2.1e-166 589.3 319 83.7
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.8e-165 586.3 320 81.6
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 4.0e-165 585.1 371 74.9
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 7.5e-164 580.9 353 76.8
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 7.5e-164 580.9 385 72.5
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.7e-163 579.7 326 81.6
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 2.9e-163 578.9 393 71.8
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 3.7e-163 578.6 369 75.1
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.9e-162 576.2 367 74.7
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 9.2e-162 573.9 354 78.0
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 8.6e-160 567.4 405 69.4
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 1.2e-158 563.5 384 70.6
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 8.1e-158 560.8 321 79.4
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 7.5e-156 554.3 408 67.6
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 9.8e-156 553.9 328 76.8
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 2.9e-155 552.4 368 73.4
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.9e-154 549.7 376 71.3
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.6e-153 546.6 297 81.8
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 1.6e-150 536.6 293 81.6
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 2.3e-149 532.7 325 75.1
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 5.2e-149 531.6 367 69.5
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 2.5e-143 512.7 287 78.7
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.6e-143 510.8 320 74.4
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 4.7e-142 508.4 312 71.8
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 5.2e-141 505.0 321 69.2
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.0e-140 503.1 312 71.2
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 7.6e-140 501.1 307 71.7
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 7.1e-138 494.6 629 46.9
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 8.7e-128 461.1 315 66.7
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 2.1e-121 439.9 243 80.7
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 1.9e-106 390.2 270 69.6
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 1.8e-104 383.6 253 73.5
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.7e-103 377.9 278 65.5
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 1.9e-98 363.6 225 76.4
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.2e-91 340.1 351 45.3
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 2.9e-83 313.2 366 43.2
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.2e-81 307.8 310 46.5
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.0e-80 304.7 311 46.0
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 5.2e-72 275.8 161 77.0
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 8.6e-59 231.9 170 65.9
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 4.7e-57 226.1 346 39.3
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 4.7e-57 226.1 122 79.5
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 6.4e-54 215.7 214 51.4
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.1e-50 204.9 134 73.1
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.2e-49 201.4 204 53.4
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 3.1e-48 196.8 196 47.4
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 9.9e-31 138.7 81 72.8
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 8.1e-25 119.0 70 77.1
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.2e-15 88.6 79 49.4
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 6.0e-12 76.3 62 59.7
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 1.8e-11 74.7 38 78.9
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 3.1e-08 63.9 116 33.6
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.5e-07 61.6 34 76.5
Cfa005891 Carpinus fangiana HOM05D000363 ORTHO05D000236 4.5e-07 60.1 125 29.6
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 4.5e-07 60.1 126 29.4
Aqoxy4G01160 Aquilegia oxysepala HOM05D000363 ORTHO05D000236 4.9e-06 56.6 145 28.3
QL12p028134 Quercus lobata HOM05D000363 ORTHO05D000236 4.9e-06 56.6 109 29.4
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 8.4e-06 55.8 100 32.0


User provided reference genes

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