Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 6.2e-156 554.3 325 100.0
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 8.8e-134 480.7 323 89.5
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 8.2e-132 474.2 322 88.2
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 1.2e-61 241.1 177 72.9
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.3e-60 237.7 195 68.2
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 8.4e-60 235.0 177 71.2
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 9.3e-59 231.5 177 70.6
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 4.5e-53 212.6 177 63.3
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.2e-45 188.0 175 59.4
FAN20G0407 Fragaria x ananassa HOM05D005305 ORTHO05D006394 7.6e-45 185.3 312 41.0
FAN20G1442 Fragaria x ananassa HOM05D005305 ORTHO05D006394 7.6e-45 185.3 312 41.0
FAN20G2254 Fragaria x ananassa HOM05D005305 ORTHO05D006394 7.6e-45 185.3 312 41.0
FAN20G2361 Fragaria x ananassa HOM05D005305 ORTHO05D006394 7.6e-45 185.3 312 41.0
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 6.0e-42 175.6 182 54.9
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 3.9e-41 172.9 181 54.7
FAN02G3216 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.1e-40 171.4 175 56.0
FvH4_2g04910 Fragaria vesca HOM05D005305 ORTHO05D006394 9.0e-38 161.8 283 40.3
FAN24G2323 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.8e-36 156.4 270 41.5
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 8.5e-36 155.2 140 64.3
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.1e-30 136.3 116 62.9
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 1.5e-29 134.4 116 62.1
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 1.7e-28 131.0 137 51.8
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 2.2e-28 130.6 172 47.1
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 5.0e-28 129.4 146 47.9
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 2.5e-27 127.1 173 43.9
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.2e-27 126.7 104 59.6
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 5.5e-27 125.9 188 43.6
FAN02G0608 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.7e-26 123.6 107 60.7
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 4.6e-26 122.9 146 46.6
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 1.4e-25 121.3 173 42.2
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 3.9e-25 119.8 178 42.7
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 1.1e-24 118.2 172 40.7
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 3.3e-24 116.7 179 39.1
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 3.3e-24 116.7 170 40.0
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 7.4e-24 115.5 182 38.5
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 7.4e-24 115.5 176 42.6
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 7.4e-24 115.5 176 42.6
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 9.7e-24 115.2 183 38.3
FAN05G3957 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.2e-23 114.0 107 57.9
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 2.8e-23 113.6 155 43.2
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 4.8e-23 112.8 181 36.5
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 2.4e-22 110.5 181 37.0
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 4.1e-22 109.8 166 41.0
FvH4_3g08610 Fragaria vesca HOM05D005305 ORTHO05D006394 4.1e-22 109.8 116 56.0
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 5.3e-22 109.4 182 39.0
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 6.5e-20 102.4 170 39.4
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 1.9e-19 100.9 160 37.5
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 1.9e-19 100.9 160 37.5
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 1.9e-19 100.9 160 37.5
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 1.9e-19 100.9 164 39.0
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 2.5e-19 100.5 152 38.8
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 2.5e-19 100.5 162 35.8
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 2.5e-19 100.5 165 41.8
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 3.2e-19 100.1 163 35.6
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 3.2e-19 100.1 168 35.7
FvH4_4g36551 Fragaria vesca HOM05D005305 ORTHO05D006394 3.2e-19 100.1 176 41.5
FAN11G0652 Fragaria x ananassa HOM05D005305 ORTHO05D006394 7.2e-19 99.0 116 53.4
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 2.7e-18 97.1 175 36.0
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 2.7e-18 97.1 208 35.1
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 3.6e-18 96.7 188 35.1
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 4.7e-18 96.3 165 35.2
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 1.0e-17 95.1 175 40.0
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 1.8e-17 94.4 141 39.7
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 2.3e-17 94.0 162 39.5
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 3.0e-17 93.6 161 37.9
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 5.2e-17 92.8 188 34.0
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 5.2e-17 92.8 153 37.9
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 8.8e-17 92.0 158 36.1
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 8.8e-17 92.0 169 36.7
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 1.1e-16 91.7 158 36.1
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 2.0e-16 90.9 146 42.5
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 2.6e-16 90.5 167 34.7
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 2.6e-16 90.5 158 36.1
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 2.6e-16 90.5 158 36.1
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 4.4e-16 89.7 159 37.7
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 5.7e-16 89.4 158 35.4
FAN12G4281 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.7e-16 89.4 175 37.7
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 5.7e-16 89.4 170 34.1
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 7.4e-16 89.0 173 34.7
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 7.4e-16 89.0 173 35.8
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 1.3e-15 88.2 141 39.7
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 1.3e-15 88.2 161 36.0
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 1.7e-15 87.8 175 34.9
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 2.2e-15 87.4 163 35.6
FAN22G1821 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.7e-15 86.7 75 61.3
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 6.3e-15 85.9 149 40.3
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 1.1e-14 85.1 164 34.8
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 1.4e-14 84.7 172 33.1
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 3.1e-14 83.6 161 37.3
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 4.1e-14 83.2 161 35.4
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 7.0e-14 82.4 159 34.6
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 9.1e-14 82.0 167 34.7
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 9.1e-14 82.0 167 36.5
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 2.6e-13 80.5 167 32.9
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 2.6e-13 80.5 167 30.5
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 7.7e-13 79.0 147 35.4
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 7.7e-13 79.0 159 34.6
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 1.0e-12 78.6 191 32.5
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 1.0e-12 78.6 162 33.3
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 1.3e-12 78.2 172 30.2
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 2.2e-12 77.4 143 36.4
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 2.9e-12 77.0 152 32.9
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 1.5e-11 74.7 165 33.3
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 1.5e-11 74.7 166 33.7
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 4.2e-11 73.2 165 35.2
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 4.2e-11 73.2 167 33.5
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 1.2e-10 71.6 156 33.3
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 1.6e-10 71.2 174 32.2
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 1.6e-10 71.2 156 33.3
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 4.7e-10 69.7 172 33.7
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 6.1e-10 69.3 164 34.8
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 8.0e-10 68.9 177 31.6
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.8e-09 67.8 172 33.7
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 2.3e-09 67.4 194 30.4
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 3.0e-09 67.0 135 34.1
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 4.0e-09 66.6 172 32.0
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 4.0e-09 66.6 177 30.5
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 4.0e-09 66.6 141 29.8
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 2.6e-08 63.9 87 39.1
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 2.6e-08 63.9 178 28.1
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 3.3e-08 63.5 147 31.3
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 5.7e-08 62.8 189 30.7
ATR0311G001 Amborella trichopoda HOM05D005305 ORTHO05D006394 9.7e-08 62.0 158 31.0
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 9.7e-08 62.0 181 27.1
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 1.7e-07 61.2 143 30.1
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 3.7e-07 60.1 189 28.6
EL10Ac6g14255 Beta vulgaris HOM05D002727 ORTHO05D002856 6.3e-07 59.3 161 27.3
FAN03G1798 Fragaria x ananassa HOM05D002727 ORTHO05D002856 6.3e-07 59.3 141 32.6
Lalb_Chr21g0308511 Lupinus albus HOM05D002727 ORTHO05D002856 8.2e-07 58.9 133 33.1
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 8.2e-07 58.9 182 27.5
THA.LOC104824147 Tarenaya hassleriana HOM05D002727 ORTHO05D002856 8.2e-07 58.9 134 29.9
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 1.1e-06 58.5 178 30.3
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 1.1e-06 58.5 189 28.0
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 1.1e-06 58.5 118 35.6
MD16G1031100 Malus domestica HOM05D002727 ORTHO05D002856 1.1e-06 58.5 132 29.5
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 1.4e-06 58.2 98 37.8
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 1.4e-06 58.2 98 37.8
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 1.4e-06 58.2 98 37.8
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 1.4e-06 58.2 98 37.8
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.4e-06 58.2 123 35.8
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 1.8e-06 57.8 189 27.5
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 1.8e-06 57.8 189 27.5
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 1.8e-06 57.8 146 30.1
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.8e-06 57.8 146 29.5
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.8e-06 57.8 146 30.1
Hma1.2p1_0712F.1_g207580 Hydrangea macrophylla HOM05D007205 ORTHO05D009175 1.8e-06 57.8 141 27.0
Atru.chr11.374 Acer truncatum HOM05D002727 ORTHO05D002856 2.4e-06 57.4 129 29.5
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 2.4e-06 57.4 183 25.7
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 2.4e-06 57.4 134 31.3
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.4e-06 57.4 146 29.5
Nn3g19189 Nelumbo nucifera HOM05D010623 ORTHO05D012718 2.4e-06 57.4 131 31.3
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 4.1e-06 56.6 183 27.9
FAN20G2548 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.3e-06 56.2 146 29.5
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 7.0e-06 55.8 112 36.6
HanXRQChr17g0564241 Helianthus annuus HOM05D007205 ORTHO05D009175 7.0e-06 55.8 129 29.5
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 9.1e-06 55.5 181 27.6
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 9.1e-06 55.5 141 28.4
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 9.1e-06 55.5 106 32.1


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