Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g01203 Fragaria vesca HOM05D000003 ORTHO05D011274 1.5e-59 232.6 117 100.0
RcHm_v2.0_Chr6g0289791 Rosa chinensis HOM05D000003 ORTHO05D011454 3.5e-16 88.6 86 54.7
RcHm_v2.0_Chr5g0066251 Rosa chinensis HOM05D000003 ORTHO05D011454 1.1e-14 83.6 73 58.9
RcHm_v2.0_Chr4g0402201 Rosa chinensis HOM05D000003 ORTHO05D000004 5.6e-14 81.3 86 48.8
FvH4_2g13111 Fragaria vesca HOM05D000003 ORTHO05D011274 2.0e-11 72.8 83 47.0
FAN24G1917 Fragaria x ananassa HOM05D000011 ORTHO05D000157 2.0e-11 72.8 83 47.0
FvH4_6g22781 Fragaria vesca HOM05D000003 ORTHO05D000006 4.9e-10 68.2 83 44.6
CANSAT78G2307 Cannabis sativa HOM05D000003 ORTHO05D000167 6.4e-10 67.8 102 40.2
CANSAT64G2222 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-08 62.4 105 34.3
vmacro23423 Vaccinium macrocarpon HOM05D000203 ORTHO05D051530 2.7e-08 62.4 77 42.9
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-08 62.0 93 39.8
FvH4_7g03001 Fragaria vesca HOM05D010636 ORTHO05D011274 3.5e-08 62.0 85 43.5
Atru.chr1.3159 Acer truncatum HOM05D000003 ORTHO05D000167 6.0e-08 61.2 86 34.9
Duzib084G0587 Durio zibethinus HOM05D000003 ORTHO05D000167 7.8e-08 60.8 89 36.0
CANSAT56G3747 Cannabis sativa HOM05D000003 ORTHO05D000167 1.0e-07 60.5 99 35.4
Nitab4.5_0001319g0060 Nicotiana tabacum HOM05D011052 ORTHO05D004636 1.0e-07 60.5 86 40.7
RcHm_v2.0_Chr5g0078071 Rosa chinensis HOM05D010636 ORTHO05D011274 1.0e-07 60.5 73 45.2
CANSAT35G2037 Cannabis sativa HOM05D000003 ORTHO05D000167 1.7e-07 59.7 96 37.5
CANSAT35G0664 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-07 59.3 91 37.4
CANSAT64G2795 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-07 59.3 117 35.9
QL09p043312 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-07 59.3 111 36.0
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-07 58.9 85 38.8
Atru.chr3.3369 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-07 58.9 75 38.7
Atru.chr10.1536 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-07 58.2 89 34.8
Atru.chr5.1598 Acer truncatum HOM05D000856 ORTHO05D000167 5.1e-07 58.2 102 30.4
Atru.chr5.1907 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-07 58.2 91 39.6
Atru.chr8.183 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-07 58.2 83 33.7
Atru.chr8.265 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-07 58.2 83 33.7
CANSAT21G0849 Cannabis sativa HOM05D000003 ORTHO05D000004 6.6e-07 57.8 88 37.5
Atru.chr1.3779 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 57.0 86 34.9
Atru.chr4.1214 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 57.0 86 36.0
FvH4_2g20801 Fragaria vesca HOM05D008097 ORTHO05D000167 1.1e-06 57.0 66 47.0
Atru.chr10.544 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 94 34.0
Atru.chr12.2026 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 85 32.9
Atru.chr13.1294 Acer truncatum HOM05D000003 ORTHO05D000167 1.5e-06 56.6 87 34.5
Prupe.3G063400 Prunus persica HOM05D000003 ORTHO05D000167 1.5e-06 56.6 87 37.9
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.9e-06 56.2 103 31.1
CANSAT21G1904 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 56.2 104 36.5
FvH4_5g31851 Fragaria vesca HOM05D010636 ORTHO05D011274 1.9e-06 56.2 80 40.0
PSO063G1632 Papaver somniferum HOM05D000003 ORTHO05D001026 1.9e-06 56.2 90 35.6
QL12p032525 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-06 56.2 90 33.3
Atru.chr10.535 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 55.8 94 34.0
Atru.chr4.2116 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 55.8 88 39.8
CANSAT21G2622 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-06 55.8 114 32.5
Prupe.7G049300 Prunus persica HOM05D000003 ORTHO05D000004 2.5e-06 55.8 88 34.1
Atru.chr3.896 Acer truncatum HOM05D000039 ORTHO05D001943 3.3e-06 55.5 88 39.8
CANSAT11G0402 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 55.5 78 35.9
CANSAT54G2688 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 55.5 107 33.6
CANSAT80G1428 Cannabis sativa HOM05D000003 ORTHO05D000167 3.3e-06 55.5 93 34.4
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 3.3e-06 55.5 86 37.2
Prupe.7G076800 Prunus persica HOM05D000003 ORTHO05D000167 3.3e-06 55.5 97 38.1
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 3.3e-06 55.5 80 41.2
Atru.chr1.3957 Acer truncatum HOM05D000003 ORTHO05D000167 4.3e-06 55.1 86 37.2
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-06 55.1 95 33.7
Atru.chr2.2733 Acer truncatum HOM05D000003 ORTHO05D000167 4.3e-06 55.1 85 32.9
CANSAT54G0363 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-06 55.1 112 32.1
CANSAT56G1970 Cannabis sativa HOM05D000003 ORTHO05D000167 4.3e-06 55.1 111 35.1
QL04p096329 Quercus lobata HOM05D000003 ORTHO05D000167 4.3e-06 55.1 88 39.8
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.3e-06 55.1 83 37.3
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.3e-06 55.1 83 37.3
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 5.6e-06 54.7 68 35.3
Atru.chr12.1232 Acer truncatum HOM05D000003 ORTHO05D000167 5.6e-06 54.7 85 34.1
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 54.7 86 36.0
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-06 54.7 81 34.6
CANSAT80G1791 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-06 54.7 89 34.8
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 5.6e-06 54.7 91 37.4
QL11p050659 Quercus lobata HOM05D002097 ORTHO05D002248 5.6e-06 54.7 80 33.8
TWI31G0724 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.6e-06 54.7 102 32.4
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.6e-06 54.7 85 34.1
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-06 54.3 86 38.4
Atru.chr6.426 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-06 54.3 91 39.6
Atru.chr7.573 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-06 54.3 88 37.5
CANSAT01G0882 Cannabis sativa HOM05D000003 ORTHO05D000167 7.3e-06 54.3 66 47.0
vmacro12951 Vaccinium macrocarpon HOM05D002252 ORTHO05D002451 7.3e-06 54.3 96 38.5
Atru.chr6.486 Acer truncatum HOM05D000003 ORTHO05D000167 9.5e-06 53.9 85 32.9
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 53.9 85 35.3
Haze_05932 Corylus avellana HOM05D009031 ORTHO05D000167 9.5e-06 53.9 95 34.7
FAN14G1208 Fragaria x ananassa HOM05D003297 ORTHO05D004027 9.5e-06 53.9 41 53.7
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.5e-06 53.9 85 32.9
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.5e-06 53.9 85 32.9


User provided reference genes

Program Settings