Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 6.1e-265 917.1 536 100.0
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 2.2e-227 792.3 552 86.1
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 1.0e-203 713.8 509 86.8
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 1.9e-165 586.6 514 72.8
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 2.5e-146 523.1 429 75.5
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 9.7e-130 468.0 524 60.1
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 4.5e-127 459.1 498 63.5
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 7.7e-127 458.4 510 60.2
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 2.4e-120 436.8 521 58.0
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 4.1e-120 436.0 509 57.2
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 2.7e-119 433.3 497 59.4
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 2.7e-116 423.3 514 56.8
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 2.3e-115 420.2 462 61.0
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.5e-114 417.5 498 60.2
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 2.2e-113 413.7 462 61.0
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 6.3e-113 412.1 435 65.5
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 1.8e-112 410.6 502 56.2
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 3.1e-112 409.8 519 57.8
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 4.1e-112 409.5 551 55.7
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 9.1e-112 408.3 509 57.4
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 6.5e-110 402.1 487 61.2
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 1.5e-109 401.0 530 53.4
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 2.5e-109 400.2 496 58.5
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 2.5e-109 400.2 529 57.3
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 3.2e-109 399.8 511 55.4
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 4.2e-109 399.4 502 54.8
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 5.5e-109 399.1 463 58.5
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 8.0e-108 395.2 509 54.4
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 3.0e-107 393.3 552 52.0
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 1.2e-106 391.3 515 54.4
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 6.3e-105 385.6 512 57.8
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 2.7e-103 380.2 521 52.6
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 2.3e-102 377.1 525 54.1
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 2.9e-102 376.7 488 52.9
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 4.3e-101 372.9 503 55.3
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 7.3e-101 372.1 467 56.7
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 4.7e-100 369.4 498 56.6
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 1.0e-99 368.2 486 56.8
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 6.4e-97 359.0 475 53.7
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.1e-96 358.2 502 52.0
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 9.2e-96 355.1 419 62.1
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.6e-95 354.4 515 53.8
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 5.9e-95 352.4 464 56.2
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.1e-93 348.2 488 53.9
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 1.9e-93 347.4 519 53.2
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 2.5e-93 347.1 536 40.5
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.4e-91 341.3 557 49.4
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 3.1e-91 340.1 471 54.1
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 5.2e-91 339.3 495 53.3
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 5.2e-91 339.3 482 53.1
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.5e-90 337.8 456 55.5
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 2.0e-90 337.4 498 53.6
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 2.6e-90 337.0 538 50.2
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 2.6e-90 337.0 550 50.4
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 3.4e-90 336.7 408 61.0
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 4.4e-90 336.3 563 49.6
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 9.8e-90 335.1 563 49.4
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.3e-89 334.7 563 49.4
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 1.4e-88 331.3 491 52.3
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 1.6e-87 327.8 564 49.1
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 7.8e-87 325.5 320 54.7
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 1.3e-86 324.7 492 51.6
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 2.5e-85 320.5 514 51.0
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 5.6e-85 319.3 515 40.6
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 6.2e-84 315.8 475 52.8
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 1.4e-83 314.7 487 41.5
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 7.5e-82 308.9 558 49.3
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 1.3e-81 308.1 309 72.8
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 6.4e-81 305.8 314 71.3
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 7.8e-79 298.9 502 50.0
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 1.2e-76 291.6 288 52.4
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 2.8e-76 290.4 324 49.4
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 6.2e-76 289.3 502 49.2
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 6.2e-76 289.3 342 63.2
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 7.6e-74 282.3 322 50.0
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 3.5e-71 273.5 495 46.5
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 1.4e-64 251.5 508 40.2
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 5.4e-64 249.6 268 51.9
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.2e-63 248.4 146 87.7
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 8.7e-54 215.7 266 46.2
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 3.7e-52 210.3 493 43.4
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 4.6e-47 193.4 239 68.6
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 4.6e-47 193.4 264 63.3
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 3.9e-46 190.3 264 62.5
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.0e-41 175.6 420 33.1
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 1.1e-35 155.6 136 58.8
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 3.2e-32 144.1 275 40.4
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 3.0e-30 137.5 388 41.2
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 3.9e-30 137.1 184 43.5
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 3.3e-29 134.0 123 59.3
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 7.4e-29 132.9 125 57.6
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 1.3e-28 132.1 216 61.1
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.4e-27 128.6 100 67.0
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 4.1e-27 127.1 442 34.2
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 1.4e-24 118.6 176 44.3
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 6.1e-23 113.2 178 38.8
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 3.0e-22 110.9 144 46.5
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 5.1e-22 110.2 201 36.8
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 8.2e-20 102.8 119 43.7
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 1.1e-19 102.4 130 46.2
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 4.1e-19 100.5 448 22.5
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 5.3e-19 100.1 105 50.5
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-18 97.4 87 55.2
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 1.9e-16 91.7 68 61.8
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 1.6e-15 88.6 175 35.4
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 2.3e-14 84.7 286 27.6
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 2.6e-13 81.3 76 56.6
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 6.3e-12 76.6 68 57.4
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 1.1e-11 75.9 63 58.7
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 4.1e-11 73.9 45 75.6
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 2.0e-10 71.6 144 34.7
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 5.9e-10 70.1 119 40.3
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.3e-09 68.9 42 76.2
Nitab4.5_0004239g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.9e-09 67.8 60 55.0
Nitab4.5_0009075g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 3.8e-09 67.4 89 42.7
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.2e-07 62.4 48 60.4
arahy.Tifrunner.gnm1.ann1.N9UN2I Arachis hypogaea HOM05D000138 ORTHO05D000078 6.7e-06 56.6 45 60.0


User provided reference genes

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