Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 5.9e-149 530.8 260 100.0
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.5e-147 525.4 260 98.8
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 8.0e-146 520.4 260 98.1
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 1.9e-126 456.1 261 87.7
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 3.0e-84 315.8 263 66.2
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 5.8e-80 301.6 200 72.5
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 9.3e-78 294.3 202 72.3
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 7.9e-77 291.2 248 63.7
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 2.3e-76 289.7 259 58.7
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 3.0e-76 289.3 201 71.1
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 8.7e-76 287.7 259 60.6
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 7.4e-75 284.6 212 67.5
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 9.7e-75 284.3 230 63.5
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 1.6e-74 283.5 193 71.5
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 1.6e-74 283.5 197 69.0
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 4.8e-74 282.0 197 69.0
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 6.3e-74 281.6 249 61.8
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 5.3e-73 278.5 196 67.9
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.0e-72 276.6 202 65.8
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 4.5e-72 275.4 254 58.7
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 2.2e-71 273.1 204 66.2
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 2.2e-71 273.1 270 57.0
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 2.9e-71 272.7 241 58.1
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 1.4e-70 270.4 252 57.1
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 3.2e-70 269.2 254 57.5
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 4.2e-70 268.9 193 67.4
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 5.5e-70 268.5 254 56.7
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.5e-70 268.5 254 57.1
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 2.7e-69 266.2 232 60.3
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 6.1e-69 265.0 198 66.7
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 1.3e-68 263.8 176 69.9
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 1.3e-68 263.8 177 71.8
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 1.3e-68 263.8 209 64.6
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 1.8e-68 263.5 199 65.8
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 1.8e-68 263.5 227 61.7
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 3.0e-68 262.7 212 62.7
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.0e-68 262.7 196 65.3
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.0e-68 262.7 196 65.3
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 3.0e-68 262.7 176 71.0
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.1e-67 260.8 259 54.1
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.9e-67 260.0 231 59.7
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 2.5e-67 259.6 248 54.8
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 2.5e-67 259.6 183 67.2
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 3.3e-67 259.2 130 96.9
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 3.3e-67 259.2 259 54.8
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 5.7e-67 258.5 244 54.9
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 7.4e-67 258.1 220 65.5
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.7e-66 256.9 243 56.0
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.7e-66 256.9 235 56.2
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 1.7e-66 256.9 254 55.9
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 2.2e-66 256.5 257 54.5
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 4.8e-66 255.4 195 61.0
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 8.2e-66 254.6 250 58.0
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 8.2e-66 254.6 210 59.5
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.1e-65 254.2 236 56.8
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 1.8e-65 253.4 236 56.4
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 3.1e-65 252.7 253 54.2
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 5.3e-65 251.9 244 55.3
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 3.4e-64 249.2 197 58.4
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 4.5e-64 248.8 237 57.8
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 5.9e-64 248.4 246 54.5
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.0e-63 247.7 242 53.7
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 1.3e-63 247.3 250 54.0
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.3e-63 247.3 234 56.0
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 1.7e-63 246.9 199 60.8
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 2.2e-63 246.5 194 60.3
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 2.2e-63 246.5 238 55.5
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 2.2e-63 246.5 216 56.9
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 2.9e-63 246.1 250 54.4
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 5.0e-63 245.4 198 63.6
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 8.5e-63 244.6 252 55.2
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 2.5e-62 243.0 175 64.0
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 5.5e-62 241.9 199 63.3
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 7.2e-62 241.5 184 62.0
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 3.3e-59 232.6 212 52.4
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 3.3e-59 232.6 204 55.9
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 2.6e-56 223.0 258 49.6
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 1.0e-55 221.1 179 64.2
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.0e-55 221.1 209 54.5
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 1.2e-53 214.2 198 56.1
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.4e-52 210.7 205 51.7
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 1.8e-52 210.3 188 56.9
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 6.7e-52 208.4 170 64.1
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 4.4e-51 205.7 195 54.9
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 2.2e-50 203.4 356 38.5
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 4.5e-48 195.7 200 50.5
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 6.5e-47 191.8 173 52.0
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 2.6e-43 179.9 168 51.2
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 8.0e-37 158.3 82 93.9
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 6.3e-34 148.7 168 49.4
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 5.4e-33 145.6 116 60.3
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 2.3e-31 140.2 116 60.3
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 3.6e-29 132.9 205 41.0
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 3.4e-27 126.3 121 56.2
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 3.4e-19 99.8 107 49.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 6.4e-18 95.5 88 52.3
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 2.0e-16 90.5 126 43.7
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 1.8e-12 77.4 64 67.2
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 4.4e-11 72.8 59 64.4
FAN23G0455 Fragaria x ananassa HOM05D022609 ORTHO05D001690 2.1e-08 63.9 31 96.8


User provided reference genes

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