Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g28873 Fragaria vesca HOM05D010269 ORTHO05D013872 6.0e-255 883.6 433 100.0
FAN19G1111 Fragaria x ananassa HOM05D010269 ORTHO05D013872 2.5e-83 313.5 265 64.5
FvH4_1g28590 Fragaria vesca HOM05D010269 ORTHO05D013872 2.4e-46 190.7 243 45.7
FAN25G1667 Fragaria x ananassa HOM05D010269 ORTHO05D013872 5.0e-44 183.0 227 48.9
FAN19G2062 Fragaria x ananassa HOM05D010269 ORTHO05D013872 8.1e-42 175.6 225 45.8
FAN28G2680 Fragaria x ananassa HOM05D010269 ORTHO05D013872 6.4e-39 166.0 154 55.2
FAN07G2709 Fragaria x ananassa HOM05D010269 ORTHO05D013872 7.1e-38 162.5 140 62.1
FAN16G1695 Fragaria x ananassa HOM05D010269 ORTHO05D013872 3.6e-34 150.2 145 56.6
FAN19G2481 Fragaria x ananassa HOM05D010269 ORTHO05D013872 5.2e-33 146.4 175 45.1
FvH4_3g30612 Fragaria vesca HOM05D010269 ORTHO05D020636 1.2e-32 145.2 85 77.6
FvH4_1g29421 Fragaria vesca HOM05D010269 ORTHO05D013872 9.2e-30 135.6 152 49.3
FAN26G2811 Fragaria x ananassa HOM05D010269 ORTHO05D020636 3.5e-29 133.7 252 36.5
FvH4_4g08647 Fragaria vesca HOM05D010269 ORTHO05D002449 8.7e-20 102.4 171 36.3
FAN05G1890 Fragaria x ananassa HOM05D010269 ORTHO05D013872 5.3e-17 93.2 68 64.7
FvH4_3g26082 Fragaria vesca HOM05D051121 ORTHO05D020636 4.9e-15 86.7 158 34.8
FvH4_5g00051 Fragaria vesca HOM05D019777 ORTHO05D020636 1.1e-14 85.5 114 38.6
ECA233G0513 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.6e-13 80.1 340 22.6
ECA248G0092 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.3e-12 78.6 269 24.9
FAN02G4502 Fragaria x ananassa HOM05D010269 ORTHO05D013872 1.7e-12 78.2 144 34.7
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 2.3e-12 77.8 268 28.4
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 3.0e-12 77.4 253 27.7
FvH4_1g22376 Fragaria vesca HOM05D010269 ORTHO05D020636 5.1e-12 76.6 99 40.4
ECA240G4802 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.9e-11 74.7 252 24.2
FvH4_6g23091 Fragaria vesca HOM05D019777 ORTHO05D020636 1.9e-11 74.7 111 35.1
ECA232G4508 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.6e-11 73.2 228 26.3
ECA234G2049 Erigeron canadensis HOM05D003069 ORTHO05D002578 7.3e-11 72.8 251 25.9
TWI38G1939 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 9.6e-11 72.4 213 24.9
COL.COLO4_08698 Corchorus olitorius HOM05D001436 ORTHO05D000880 1.6e-10 71.6 236 28.4
FAN14G3431 Fragaria x ananassa HOM05D010269 ORTHO05D013872 2.1e-10 71.2 41 68.3
TWI18G0663 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.1e-10 71.2 253 25.3
CSS0010751 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 4.8e-10 70.1 293 24.6
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 4.8e-10 70.1 430 22.8
QL07p045945 Quercus lobata HOM05D000047 ORTHO05D000044 6.2e-10 69.7 271 24.0
ECA236G0302 Erigeron canadensis HOM05D000570 ORTHO05D001174 8.1e-10 69.3 216 23.6
ECA238G3134 Erigeron canadensis HOM05D000429 ORTHO05D000352 8.1e-10 69.3 330 23.9
ECA246G2201 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-09 67.8 298 23.8
ECA232G3754 Erigeron canadensis HOM05D003069 ORTHO05D002578 3.1e-09 67.4 258 24.0
ECA236G4954 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.1e-09 67.4 274 23.7
arahy.Tifrunner.gnm1.ann1.R1MCB0 Arachis hypogaea HOM05D000429 ORTHO05D000880 4.0e-09 67.0 270 26.3
ECA233G1035 Erigeron canadensis HOM05D003069 ORTHO05D002578 4.0e-09 67.0 249 24.9
TWI31G0801 Tripterygium wilfordii HOM05D000429 ORTHO05D002449 4.0e-09 67.0 412 21.6
TWI56G0121 Tripterygium wilfordii HOM05D000429 ORTHO05D002449 4.0e-09 67.0 245 23.7
CSS0004947 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 6.9e-09 66.2 231 23.8
ECA235G0002 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.9e-09 66.2 300 23.0
ECA247G0122 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.9e-09 66.2 354 20.3
FvH4_1g29436 Fragaria vesca HOM05D051121 ORTHO05D020636 9.0e-09 65.9 84 42.9
ECA232G3046 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.0e-08 64.7 298 22.8
ECA234G2950 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.0e-08 64.7 257 24.1
ECA236G2902 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.6e-08 64.3 299 23.1
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 3.4e-08 63.9 289 25.3
CSS0003738 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 4.5e-08 63.5 256 23.0
Ca_05281_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.5e-08 63.5 169 29.6
ECA236G2529 Erigeron canadensis HOM05D003069 ORTHO05D002578 4.5e-08 63.5 251 23.5
PSO170G3433 Papaver somniferum HOM05D000429 ORTHO05D002449 4.5e-08 63.5 281 21.7
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 4.5e-08 63.5 289 24.6
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 4.5e-08 63.5 289 24.6
CSS0047560 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 5.8e-08 63.2 231 23.4
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 5.8e-08 63.2 96 32.3
ECA236G4606 Erigeron canadensis HOM05D003069 ORTHO05D002578 5.8e-08 63.2 263 25.1
ECA240G1667 Erigeron canadensis HOM05D003069 ORTHO05D002578 5.8e-08 63.2 271 25.5
vmacro22445 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 5.8e-08 63.2 212 27.8
FvH4_3g17101 Fragaria vesca HOM05D000429 ORTHO05D000352 7.6e-08 62.8 73 41.1
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 7.6e-08 62.8 271 24.4
ECA238G3121 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.9e-08 62.4 299 22.7
PSO384G1833 Papaver somniferum HOM05D000429 ORTHO05D002449 9.9e-08 62.4 66 37.9
QL10p000322 Quercus lobata HOM05D000429 ORTHO05D002449 9.9e-08 62.4 269 23.4
CSS0036740 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.3e-07 62.0 270 23.7
Ca_20345_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.3e-07 62.0 96 32.3
ECA232G1486 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.3e-07 62.0 299 24.7
CSS0049794 Camellia sinensis var. sinensis HOM05D013752 ORTHO05D000352 1.7e-07 61.6 263 24.0
TWI39G0105 Tripterygium wilfordii HOM05D000429 ORTHO05D002449 1.7e-07 61.6 271 23.2
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.7e-07 61.6 270 23.3
ECA232G3359 Erigeron canadensis HOM05D000429 ORTHO05D000352 2.2e-07 61.2 288 25.0
TWI53G0621 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.2e-07 61.2 269 24.5
CSS0004875 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.9e-07 60.8 292 22.9
ECA238G1133 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.9e-07 60.8 263 22.8
ECA240G2988 Erigeron canadensis HOM05D003069 ORTHO05D002578 2.9e-07 60.8 255 23.5
ECA232G4548 Erigeron canadensis HOM05D000047 ORTHO05D000352 3.8e-07 60.5 304 24.3
ECA240G2801 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.8e-07 60.5 235 21.3
ECA232G0142 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.9e-07 60.1 303 21.8
ECA234G4773 Erigeron canadensis HOM05D003069 ORTHO05D002578 4.9e-07 60.1 244 25.8
ECA246G1600 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.9e-07 60.1 247 24.3
FvH4_4g08351 Fragaria vesca HOM05D010269 ORTHO05D196729 4.9e-07 60.1 53 54.7
PSO675G8090 Papaver somniferum HOM05D000429 ORTHO05D002449 4.9e-07 60.1 76 35.5
PSO782G3664 Papaver somniferum HOM05D000429 ORTHO05D000352 4.9e-07 60.1 224 23.7
TWI59G1246 Tripterygium wilfordii HOM05D000429 ORTHO05D008058 4.9e-07 60.1 230 24.8
CSS0009240 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 6.4e-07 59.7 240 23.3
CSS0031980 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 6.4e-07 59.7 231 22.9
CSS0037882 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.4e-07 59.7 292 23.3
PSO063G4892 Papaver somniferum HOM05D000429 ORTHO05D000352 6.4e-07 59.7 239 20.9
PSO170G5530 Papaver somniferum HOM05D000429 ORTHO05D002449 6.4e-07 59.7 63 42.9
TWI79G0404 Tripterygium wilfordii HOM05D000429 ORTHO05D002449 6.4e-07 59.7 255 22.7
ECA238G3573 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.4e-07 59.3 234 25.2
ECA238G4537 Erigeron canadensis HOM05D003069 ORTHO05D002578 8.4e-07 59.3 258 25.2
ECA246G3616 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.4e-07 59.3 272 22.8
ECA233G4429 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.1e-06 58.9 273 23.8
ECA247G2902 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.1e-06 58.9 280 22.5
PSO541G2128 Papaver somniferum HOM05D000429 ORTHO05D002449 1.1e-06 58.9 66 39.4
Ca_12999_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.4e-06 58.5 85 34.1
ECA232G1639 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.4e-06 58.5 236 25.8
ECA236G4056 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.4e-06 58.5 279 24.7
FvH4_6g11892 Fragaria vesca HOM05D000429 ORTHO05D000880 1.4e-06 58.5 73 39.7
PSO210G5622 Papaver somniferum HOM05D000429 ORTHO05D002449 1.4e-06 58.5 66 37.9
TWI73G1214 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.4e-06 58.5 239 23.0
CSS0031443 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.9e-06 58.2 292 23.3
CSS0033267 Camellia sinensis var. sinensis HOM05D009643 ORTHO05D010737 1.9e-06 58.2 66 37.9
CANSAT78G0316 Cannabis sativa HOM05D000429 ORTHO05D000352 1.9e-06 58.2 181 27.1
ECA240G4278 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.9e-06 58.2 265 24.2
ECA246G3693 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.9e-06 58.2 289 21.8
PSO210G4480 Papaver somniferum HOM05D000429 ORTHO05D000352 1.9e-06 58.2 203 21.2
PSO675G6062 Papaver somniferum HOM05D000429 ORTHO05D002449 1.9e-06 58.2 66 37.9
ECA240G2777 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-06 57.8 219 24.2
PSO110G0001 Papaver somniferum HOM05D000429 ORTHO05D002449 2.4e-06 57.8 78 34.6
PSO198G0005 Papaver somniferum HOM05D000429 ORTHO05D002449 2.4e-06 57.8 66 36.4
PSO230G0001 Papaver somniferum HOM05D000429 ORTHO05D002449 2.4e-06 57.8 78 34.6
PSO339G6488 Papaver somniferum HOM05D000429 ORTHO05D002449 2.4e-06 57.8 251 23.5
PSO421G0742 Papaver somniferum HOM05D000429 ORTHO05D002449 2.4e-06 57.8 282 22.7
PSO832G4167 Papaver somniferum HOM05D000429 ORTHO05D002449 2.4e-06 57.8 66 34.8
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 3.2e-06 57.4 282 22.3
PSO170G6429 Papaver somniferum HOM05D000429 ORTHO05D002449 3.2e-06 57.4 66 34.8
PSO384G1318 Papaver somniferum HOM05D000429 ORTHO05D002449 3.2e-06 57.4 208 23.1
PSO675G5458 Papaver somniferum HOM05D000429 ORTHO05D002449 3.2e-06 57.4 66 37.9
VMungo1127G1198 Vigna mungo HOM05D000066 ORTHO05D000589 3.2e-06 57.4 88 29.5
CSS0001426 Camellia sinensis var. sinensis HOM05D000877 ORTHO05D001509 4.2e-06 57.0 66 36.4
ECA233G3756 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.2e-06 57.0 206 24.3
ECA248G1810 Erigeron canadensis HOM05D000429 ORTHO05D000352 4.2e-06 57.0 205 25.9
Manes.18G025086 Manihot esculenta HOM05D000429 ORTHO05D000880 4.2e-06 57.0 313 23.3
PSO478G4316 Papaver somniferum HOM05D000429 ORTHO05D002449 4.2e-06 57.0 66 37.9
VMungo0331G0341 Vigna mungo HOM05D000429 ORTHO05D002449 5.5e-06 56.6 77 31.2
PSO017G0797 Papaver somniferum HOM05D000429 ORTHO05D002449 7.1e-06 56.2 78 33.3
PSO339G2401 Papaver somniferum HOM05D000429 ORTHO05D000352 7.1e-06 56.2 66 34.8
TWI15G0372 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 7.1e-06 56.2 148 25.0
CSS0016049 Camellia sinensis var. sinensis HOM05D009643 ORTHO05D010737 9.3e-06 55.8 66 34.8
ECA234G1798 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.3e-06 55.8 285 22.5
ECA238G4364 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.3e-06 55.8 244 23.0
ECA248G1035 Erigeron canadensis HOM05D000041 ORTHO05D000452 9.3e-06 55.8 224 25.0
FvH4_4g15485 Fragaria vesca HOM05D010269 ORTHO05D013872 9.3e-06 55.8 125 29.6
MBI15_g11945_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 9.3e-06 55.8 89 33.7
TWI73G1077 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 9.3e-06 55.8 103 28.2


User provided reference genes

Program Settings