Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 1.3e-106 389.8 215 100.0
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 3.8e-101 371.7 222 94.6
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 3.7e-96 355.1 240 87.1
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 1.9e-84 316.2 219 83.6
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 9.1e-71 270.8 217 72.8
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 9.4e-68 260.8 210 71.4
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 2.8e-64 249.2 209 68.9
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 3.1e-63 245.7 210 68.6
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 5.9e-62 241.5 208 67.8
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 1.0e-61 240.7 208 66.3
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.7e-61 240.0 189 71.4
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 3.8e-61 238.8 189 70.4
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 1.1e-60 237.3 205 65.9
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 1.5e-60 236.9 214 64.5
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 2.5e-60 236.1 202 66.3
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 3.3e-60 235.7 210 66.2
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 7.3e-60 234.6 202 66.8
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 7.3e-60 234.6 189 70.9
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 2.1e-59 233.0 200 67.5
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.4e-58 230.3 205 64.4
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 1.8e-58 229.9 212 62.7
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 2.3e-58 229.6 188 70.2
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 4.0e-58 228.8 184 67.9
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 4.0e-58 228.8 207 66.2
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 5.2e-58 228.4 199 65.8
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 8.9e-58 227.6 187 68.4
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.5e-57 226.9 194 67.0
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 3.4e-57 225.7 188 70.7
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 5.7e-57 224.9 205 64.4
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 7.5e-57 224.6 211 62.1
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 9.8e-57 224.2 209 63.2
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 1.7e-56 223.4 177 72.9
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 2.9e-56 222.6 186 67.2
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 4.9e-56 221.9 214 61.2
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 4.9e-56 221.9 210 60.0
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 1.4e-55 220.3 187 64.7
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 4.1e-55 218.8 182 68.1
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 5.4e-55 218.4 186 67.2
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 7.0e-55 218.0 198 65.2
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 7.0e-55 218.0 214 60.7
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 7.0e-55 218.0 214 60.3
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 7.0e-55 218.0 240 55.8
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 1.2e-54 217.2 188 68.6
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 1.6e-54 216.9 182 67.6
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 2.0e-54 216.5 186 67.2
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 4.6e-54 215.3 202 62.9
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 5.9e-54 214.9 284 51.4
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 5.9e-54 214.9 188 64.9
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 1.7e-53 213.4 200 61.0
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 2.3e-53 213.0 209 57.4
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 3.0e-53 212.6 210 59.5
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 3.0e-53 212.6 191 68.1
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.9e-53 212.2 209 56.9
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 5.0e-53 211.8 188 66.0
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 1.5e-52 210.3 182 66.5
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.9e-52 209.9 209 56.5
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 1.9e-52 209.9 179 64.8
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 3.3e-52 209.1 212 56.6
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 7.3e-52 208.0 188 64.4
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 9.5e-52 207.6 179 66.5
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 9.5e-52 207.6 182 66.5
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 9.5e-52 207.6 194 60.8
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 2.8e-51 206.1 211 56.9
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 2.8e-51 206.1 182 65.9
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 2.8e-51 206.1 191 63.4
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 2.8e-51 206.1 186 64.5
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 6.2e-51 204.9 207 58.0
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 1.0e-50 204.1 214 56.1
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 2.3e-50 203.0 205 59.5
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.3e-50 203.0 189 61.9
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 3.1e-50 202.6 211 58.3
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 4.0e-50 202.2 208 61.1
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 6.8e-50 201.4 239 51.9
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 6.8e-50 201.4 189 61.9
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 1.5e-49 200.3 186 60.8
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 2.6e-49 199.5 203 56.2
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 4.4e-49 198.7 156 71.8
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 7.5e-49 198.0 204 55.4
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 1.1e-47 194.1 178 66.9
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 4.1e-47 192.2 190 59.5
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 9.2e-47 191.0 201 60.7
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 1.6e-46 190.3 187 58.8
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 2.7e-46 189.5 204 56.4
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 3.5e-46 189.1 206 53.4
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 4.6e-46 188.7 188 57.4
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 7.8e-46 188.0 193 56.5
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 1.7e-45 186.8 204 53.4
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 2.3e-45 186.4 184 60.3
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 3.9e-45 185.7 184 55.4
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 6.6e-45 184.9 209 56.5
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 6.6e-45 184.9 188 56.9
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 1.9e-44 183.3 176 60.2
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.5e-44 183.0 194 56.7
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 4.3e-44 182.2 193 58.5
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 4.3e-44 182.2 193 58.5
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 5.6e-44 181.8 195 56.9
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 5.6e-44 181.8 195 56.9
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 7.3e-44 181.4 198 54.5
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 2.1e-43 179.9 207 54.6
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 3.6e-43 179.1 195 53.3
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 6.2e-43 178.3 182 53.8
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 8.1e-43 177.9 91 96.7
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 8.1e-43 177.9 204 55.4
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 1.4e-42 177.2 181 58.0
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 1.8e-42 176.8 207 55.1
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 2.3e-42 176.4 183 60.7
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 3.1e-42 176.0 178 60.7
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 8.9e-42 174.5 205 54.6
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 3.4e-41 172.6 148 68.9
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 7.5e-41 171.4 203 52.2
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 2.2e-40 169.9 204 56.4
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 1.1e-39 167.5 192 55.7
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 4.1e-39 165.6 145 67.6
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 2.1e-38 163.3 203 51.7
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 3.5e-38 162.5 190 53.7
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 3.5e-38 162.5 190 53.7
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 3.5e-38 162.5 190 53.7
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 8.6e-37 157.9 145 64.8
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 1.9e-36 156.8 202 51.0
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 5.6e-36 155.2 209 48.8
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 5.6e-36 155.2 103 89.3
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 3.4e-33 146.0 214 44.4
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 4.4e-33 145.6 148 60.1
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 2.9e-32 142.9 272 41.5
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 1.4e-31 140.6 194 48.5
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 3.2e-31 139.4 118 66.9
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 3.5e-30 136.0 198 46.5
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 4.6e-30 135.6 194 47.4
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 6.0e-30 135.2 193 46.6
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 2.3e-29 133.3 183 48.6
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 1.5e-28 130.6 137 58.4
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 1.1e-23 114.4 86 73.3
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 5.4e-23 112.1 127 54.3
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 9.3e-23 111.3 118 54.2
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 1.7e-21 107.1 99 64.6
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 1.3e-19 100.9 149 40.9
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 4.8e-19 99.0 128 51.6
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 4.0e-18 95.9 146 39.0
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 9.9e-17 91.3 110 50.9
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 1.9e-15 87.0 87 48.3
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 2.4e-15 86.7 85 65.9
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 2.4e-15 86.7 149 38.9
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 1.0e-13 81.3 81 61.7
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 8.7e-13 78.2 162 31.5
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 1.5e-12 77.4 88 46.6
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 5.6e-12 75.5 109 47.7
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 2.1e-11 73.6 68 52.9
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 2.8e-11 73.2 76 51.3
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 6.4e-08 62.0 51 56.9
CSS0034638 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 7.1e-07 58.5 43 62.8


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