Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g28413 Fragaria vesca HOM05D000876 ORTHO05D015047 1.1e-84 316.6 164 100.0
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 9.4e-84 313.5 164 98.8
FAN09G3353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.5e-77 290.4 164 92.1
FAN21G1280 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.1e-71 271.6 164 87.8
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.3e-63 244.6 163 81.6
FvH4_4g20923 Fragaria vesca HOM05D000876 ORTHO05D000285 1.2e-62 243.4 129 99.2
FAN26G1613 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.5e-57 224.2 154 77.9
FAN08G3019 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.8e-49 197.2 169 65.1
RcHm_v2.0_Chr2g0103961 Rosa chinensis HOM05D000876 ORTHO05D000285 6.8e-42 174.5 168 60.1
FAN11G2465 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.4e-41 171.8 159 61.0
RcHm_v2.0_Chr2g0128681 Rosa chinensis HOM05D000876 ORTHO05D000285 6.4e-40 167.9 168 54.2
RcHm_v2.0_Chr6g0254701 Rosa chinensis HOM05D000876 ORTHO05D000285 6.4e-40 167.9 168 58.3
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 8.3e-32 141.0 165 51.5
FAN02G2707 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-31 140.2 165 51.5
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.9e-31 139.8 165 51.5
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.9e-31 139.8 165 51.5
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 3.2e-31 139.0 165 50.9
FAN04G1353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.1e-31 138.7 122 67.2
FAN02G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.4e-31 138.3 165 51.5
FAN07G1275 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.4e-31 138.3 165 50.9
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.0e-31 137.9 165 50.3
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 1.2e-30 137.1 165 50.3
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 4.6e-30 135.2 162 51.2
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.8e-30 134.4 165 49.1
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-29 134.0 165 50.3
FAN23G0201 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-29 134.0 165 49.7
FAN23G2351 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-29 134.0 165 49.7
FAN01G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-29 133.7 84 85.7
FAN02G2626 Fragaria x ananassa HOM05D007761 ORTHO05D000285 8.6e-29 131.0 126 61.9
FAN04G2125 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.5e-28 129.4 77 87.0
FAN05G3178 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.3e-28 129.0 162 46.3
FAN12G2878 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.5e-28 127.5 162 47.5
FAN19G2459 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-27 127.1 162 46.3
FAN05G4669 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.6e-27 126.7 162 45.1
FAN09G1076 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.9e-26 120.9 150 50.0
FAN10G3852 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.4e-24 114.8 68 83.8
FAN04G0891 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.9e-23 113.2 63 93.7
FAN28G0183 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.9e-23 113.2 73 83.6
FAN07G1771 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.6e-22 110.2 75 81.3
FAN10G3740 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.5e-20 103.6 80 71.2
Atru.chr5.1610 Acer truncatum HOM05D000034 ORTHO05D000037 1.9e-20 103.2 165 43.0
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-19 99.8 168 36.3
RcHm_v2.0_Chr7g0199281 Rosa chinensis HOM05D000876 ORTHO05D000285 1.8e-18 96.7 169 39.6
FAN14G5489 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.9e-18 94.4 156 36.5
FvH4_6g53022 Fragaria vesca HOM05D000876 ORTHO05D000285 1.2e-17 94.0 164 42.7
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 2.0e-17 93.2 167 44.3
FAN02G2262 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.4e-17 92.0 164 42.1
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.4e-17 92.0 170 36.5
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 1.3e-16 90.5 167 43.7
FAN08G0806 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.8e-16 89.0 153 41.2
RcHm_v2.0_Chr5g0029731 Rosa chinensis HOM05D000876 ORTHO05D000285 4.9e-16 88.6 93 51.6
FAN09G0193 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-15 87.4 56 83.9
FAN10G2724 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-15 87.4 153 40.5
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 1.4e-15 87.0 174 38.5
FAN22G0382 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.4e-15 86.3 153 41.2
FAN26G2716 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.4e-15 86.3 51 84.3
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 4.2e-15 85.5 183 35.5
FvH4_7g00070 Fragaria vesca HOM05D000876 ORTHO05D000285 7.1e-15 84.7 158 39.2
FAN06G3321 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.1e-15 84.7 163 41.1
FAN14G5115 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.1e-15 84.7 109 47.7
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 2.7e-14 82.8 159 34.6
FAN21G2068 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-13 80.5 85 48.2
FAN25G1382 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.9e-13 79.0 92 47.8
FAN07G2331 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.5e-12 76.3 73 60.3
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 3.3e-12 75.9 177 35.6
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 3.3e-12 75.9 177 35.6
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 9.6e-12 74.3 173 36.4
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 2.1e-11 73.2 166 34.9
FAN05G4445 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.8e-11 72.8 139 38.1
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 2.8e-11 72.8 173 35.3
Prupe.4G113600 Prunus persica HOM05D000876 ORTHO05D000285 3.6e-11 72.4 136 41.9
QL08p029247 Quercus lobata HOM05D013302 ORTHO05D015047 6.2e-11 71.6 173 31.8
FAN05G0722 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.1e-11 71.2 163 33.1
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 1.1e-10 70.9 173 32.4
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 1.8e-10 70.1 173 31.2
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 3.1e-10 69.3 173 31.8
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 6.9e-10 68.2 173 30.6
FAN05G3579 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.0e-10 67.8 153 35.3
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 1.2e-09 67.4 173 31.2
FAN10G2634 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.9e-09 64.3 137 37.2
Atru.chr3.2332 Acer truncatum HOM05D000034 ORTHO05D000037 1.3e-08 63.9 133 39.1
FAN21G2190 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-08 63.5 149 37.6
FAN10G3635 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.9e-08 62.8 67 53.7
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.9e-08 62.0 171 31.6
FAN14G3310 Fragaria x ananassa HOM05D000876 ORTHO05D046130 6.4e-08 61.6 73 43.8
QL02p025824 Quercus lobata HOM05D013302 ORTHO05D015047 1.4e-07 60.5 88 39.8
Haze_08488 Corylus avellana HOM05D013302 ORTHO05D015047 1.9e-07 60.1 102 33.3
FAN21G0561 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.9e-07 60.1 155 35.5
Glyma.02G166900 Glycine max HOM05D000876 ORTHO05D000285 1.9e-07 60.1 168 30.4
MD06G1090800 Malus domestica HOM05D000876 ORTHO05D000285 1.9e-07 60.1 100 37.0
FAN21G3184 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.4e-07 59.7 76 51.3
Cfa010584 Carpinus fangiana HOM05D013302 ORTHO05D015047 4.2e-07 58.9 102 32.4
Cfa013205 Carpinus fangiana HOM05D013302 ORTHO05D015047 4.2e-07 58.9 102 32.4
FAN10G0055 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.2e-07 58.9 137 35.8
Thecc.05G288300 Theobroma cacao HOM05D000876 ORTHO05D000285 5.4e-07 58.5 129 34.1
CSS0001395 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 1.2e-06 57.4 165 27.3
Prupe.1G173000 Prunus persica HOM05D000876 ORTHO05D000285 1.2e-06 57.4 159 35.2
Gorai.007G284700 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.6e-06 57.0 140 32.1
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-06 56.2 161 29.8
Duzib128G0904 Durio zibethinus HOM05D000876 ORTHO05D000285 2.7e-06 56.2 140 32.9
Gorai.005G108600 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.7e-06 56.2 166 30.7
Glyma.18G094800 Glycine max HOM05D000876 ORTHO05D000285 3.5e-06 55.8 168 29.8
Haze_18754 Corylus avellana HOM05D013302 ORTHO05D015047 6.0e-06 55.1 97 34.0
Duzib177G0996 Durio zibethinus HOM05D000876 ORTHO05D000285 6.0e-06 55.1 137 32.1
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 6.0e-06 55.1 126 31.7
Atru.chr10.824 Acer truncatum HOM05D000876 ORTHO05D000285 7.8e-06 54.7 104 35.6
MD00G1175400 Malus domestica HOM05D018741 ORTHO05D020857 7.8e-06 54.7 58 48.3


User provided reference genes

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