Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g28410 Fragaria vesca HOM05D000572 ORTHO05D019165 8.7e-47 189.9 91 100.0
FAN19G2086 Fragaria x ananassa HOM05D000572 ORTHO05D019165 8.1e-45 183.3 89 96.6
FvH4_4g15130 Fragaria vesca HOM05D000572 ORTHO05D000840 4.8e-37 157.5 82 90.2
FAN12G4122 Fragaria x ananassa HOM05D000572 ORTHO05D000840 4.8e-37 157.5 82 90.2
FAN07G2506 Fragaria x ananassa HOM05D000572 ORTHO05D000840 3.1e-36 154.8 82 89.0
FAN17G2497 Fragaria x ananassa HOM05D000572 ORTHO05D000840 3.1e-36 154.8 82 89.0
FvH4_4g00590 Fragaria vesca HOM05D000572 ORTHO05D019165 2.2e-34 148.7 82 85.4
RcHm_v2.0_Chr4g0416741 Rosa chinensis HOM05D000572 ORTHO05D000840 2.5e-30 135.2 82 81.7
Haze_00923 Corylus avellana HOM05D000572 ORTHO05D000840 2.5e-25 118.6 82 70.7
Lj3A740G52 Lonicera japonica HOM05D000572 ORTHO05D000840 3.2e-25 118.2 82 75.6
MD13G1188900 Malus domestica HOM05D000572 ORTHO05D000840 3.2e-25 118.2 83 74.7
Prupe.1G156000 Prunus persica HOM05D000572 ORTHO05D000840 7.1e-25 117.1 82 75.6
Cfa015621 Carpinus fangiana HOM05D000572 ORTHO05D000840 1.2e-24 116.3 82 70.7
Dinv44509 Davidia involucrata HOM05D000572 ORTHO05D000840 2.7e-24 115.2 82 74.4
Sp2g21510 Schrenkiella parvula HOM05D000572 ORTHO05D000840 2.7e-24 115.2 82 68.3
QL06p003211 Quercus lobata HOM05D000572 ORTHO05D000840 3.5e-24 114.8 82 67.1
CANSAT78G1323 Cannabis sativa HOM05D000572 ORTHO05D000840 4.6e-24 114.4 82 68.3
TWI73G0146 Tripterygium wilfordii HOM05D000572 ORTHO05D000840 4.6e-24 114.4 82 68.3
Actinidia08504 Actinidia chinensis HOM05D000572 ORTHO05D000840 6.0e-24 114.0 82 69.5
Dinv38429 Davidia involucrata HOM05D000572 ORTHO05D000840 6.0e-24 114.0 82 72.0
A06p36740 Brassica napus HOM05D000572 ORTHO05D000840 1.0e-23 113.2 83 69.9
ClCG06G006050 Citrullus lanatus HOM05D000572 ORTHO05D000840 2.3e-23 112.1 81 66.7
Thhalv10003643m.g Eutrema salsugineum HOM05D000572 ORTHO05D000840 2.3e-23 112.1 82 67.1
MD16G1189700 Malus domestica HOM05D000572 ORTHO05D000840 2.3e-23 112.1 83 69.9
BcaNung02813 Brassica carinata HOM05D000572 ORTHO05D000840 3.9e-23 111.3 83 68.7
C07p41790 Brassica napus HOM05D000572 ORTHO05D000840 3.9e-23 111.3 83 68.7
BolC7t44710H Brassica oleracea HOM05D000572 ORTHO05D000840 3.9e-23 111.3 83 68.7
BraA06t26596Z Brassica rapa HOM05D000572 ORTHO05D000840 3.9e-23 111.3 83 68.7
BcaNung03971 Brassica carinata HOM05D000572 ORTHO05D000840 1.5e-22 109.4 83 67.5
PGR004G2523 Punica granatum HOM05D000572 ORTHO05D000840 1.5e-22 109.4 82 69.5
MELO3C014487.2 Cucumis melo HOM05D000572 ORTHO05D000840 1.9e-22 109.0 81 65.4
CsaV3_6G038240 Cucumis sativus L. HOM05D000572 ORTHO05D000840 1.9e-22 109.0 81 65.4
Cpa.g.sc58.132 Carica papaya HOM05D000572 ORTHO05D000840 2.5e-22 108.6 82 65.9
Sc19g0004290 Simmondsia chinensis HOM05D000572 ORTHO05D000840 2.5e-22 108.6 82 68.3
Manes.15G027000 Manihot esculenta HOM05D000572 ORTHO05D000840 3.3e-22 108.2 82 68.3
GSVIVG01017933001 Vitis vinifera HOM05D000572 ORTHO05D000840 3.3e-22 108.2 82 72.0
AT5G26240 Arabidopsis thaliana HOM05D000572 ORTHO05D000840 4.3e-22 107.8 83 68.7
Eucgr.F01498 Eucalyptus grandis HOM05D000572 ORTHO05D000840 4.3e-22 107.8 82 67.1
Actinidia36979 Actinidia chinensis HOM05D000572 ORTHO05D000840 5.7e-22 107.5 82 65.9
CiPaw.01G164100 Carya illinoinensis HOM05D000572 ORTHO05D000840 5.7e-22 107.5 82 62.2
Glyma.01G239000 Glycine max HOM05D000572 ORTHO05D000840 7.4e-22 107.1 84 64.3
Atru.chr4.2505 Acer truncatum HOM05D000572 ORTHO05D000840 9.7e-22 106.7 82 68.3
Duzib212G0457 Durio zibethinus HOM05D000572 ORTHO05D000840 1.3e-21 106.3 82 65.9
THA.LOC104818777 Tarenaya hassleriana HOM05D000572 ORTHO05D000840 1.3e-21 106.3 82 64.6
VMungo1215G0056 Vigna mungo HOM05D000572 ORTHO05D000840 1.3e-21 106.3 84 64.3
Glyma.11G004600 Glycine max HOM05D000572 ORTHO05D000840 1.6e-21 105.9 84 63.1
Gohir.A01G023500 Gossypium hirsutum HOM05D000572 ORTHO05D000840 2.2e-21 105.5 82 64.6
Gohir.D01G021500 Gossypium hirsutum HOM05D000572 ORTHO05D000840 2.2e-21 105.5 82 64.6
Gorai.002G024000 Gossypium raimondii HOM05D000572 ORTHO05D000840 2.2e-21 105.5 82 64.6
Aqoxy2G03356 Aquilegia oxysepala HOM05D000572 ORTHO05D000840 2.8e-21 105.1 82 64.6
Ciclev10004375m.g Citrus clementina HOM05D000572 ORTHO05D000840 2.8e-21 105.1 82 63.4
MBI04_g17678_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D000840 3.7e-21 104.8 82 63.4
Phvul.002G047000 Phaseolus vulgaris HOM05D000572 ORTHO05D000840 3.7e-21 104.8 84 63.1
Sed0013775 Sechium edule HOM05D000572 ORTHO05D000840 4.8e-21 104.4 82 62.2
TWI09G1185 Tripterygium wilfordii HOM05D000572 ORTHO05D000840 4.8e-21 104.4 82 63.4
Carub.0006s2406 Capsella rubella HOM05D000572 ORTHO05D000840 8.2e-21 103.6 82 64.6
CiPaw.02G095700 Carya illinoinensis HOM05D000572 ORTHO05D000840 8.2e-21 103.6 82 59.8
AL6G38250 Arabidopsis lyrata HOM05D000572 ORTHO05D000840 1.1e-20 103.2 83 66.3
Lj1g0004536 Lotus japonicus HOM05D000572 ORTHO05D000840 1.1e-20 103.2 85 63.5
Nn1g02253 Nelumbo nucifera HOM05D000572 ORTHO05D000840 1.4e-20 102.8 82 64.6
vmacro15328 Vaccinium macrocarpon HOM05D000572 ORTHO05D000840 1.4e-20 102.8 82 63.4
Rhsim02G0022800 Rhododendron simsii HOM05D000572 ORTHO05D000840 2.4e-20 102.1 83 65.1
CSS0034253 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D000840 3.1e-20 101.7 75 72.0
Lalb_Chr09g0319771 Lupinus albus HOM05D000572 ORTHO05D000840 4.1e-20 101.3 84 61.9
Psat4g212280 Pisum sativum HOM05D000572 ORTHO05D000840 1.5e-19 99.4 85 63.5
CDE05G0240 Ceratophyllum demersum HOM05D000572 ORTHO05D000840 2.0e-19 99.0 82 64.6
PSO170G4847 Papaver somniferum HOM05D000572 ORTHO05D000840 2.0e-19 99.0 88 63.6
PSO302G0089 Papaver somniferum HOM05D000572 ORTHO05D000840 2.0e-19 99.0 88 63.6
Ah.13g073920 Amaranthus hybridus HOM05D000572 ORTHO05D000840 2.6e-19 98.6 82 61.0
EL10Ac3g06440 Beta vulgaris HOM05D000572 ORTHO05D000840 2.6e-19 98.6 82 59.8
Medtr5g005990 Medicago truncatula HOM05D000572 ORTHO05D000840 3.4e-19 98.2 87 60.9
Oeu034362.1 Olea europaea HOM05D000572 ORTHO05D000840 3.4e-19 98.2 86 64.0
Cc03_g03520 Coffea canephora HOM05D000572 ORTHO05D000840 5.9e-19 97.4 83 63.9
TPR.G37927 Trifolium pratense HOM05D000572 ORTHO05D000840 7.6e-19 97.1 86 60.5
Lsat_1_v5_gn_7_65741 Lactuca sativa HOM05D000572 ORTHO05D000840 1.0e-18 96.7 85 62.4
arahy.Tifrunner.gnm1.ann1.SGT6TA Arachis hypogaea HOM05D000572 ORTHO05D000840 2.9e-18 95.1 84 58.3
arahy.Tifrunner.gnm1.ann1.V66FSB Arachis hypogaea HOM05D000572 ORTHO05D000840 2.9e-18 95.1 84 58.3
Sabra10G0053200 Salix brachista HOM05D000572 ORTHO05D000840 3.8e-18 94.7 82 63.4
Gorai.011G168600 Gossypium raimondii HOM05D000572 ORTHO05D000840 5.0e-18 94.4 82 58.5
Gohir.D10G151400 Gossypium hirsutum HOM05D000572 ORTHO05D000840 8.5e-18 93.6 82 58.5
Peaxi162Scf00437g00326 Petunia axillaris HOM05D000572 ORTHO05D000840 1.1e-17 93.2 84 54.8
AUR62038633 Chenopodium quinoa HOM05D000572 ORTHO05D000840 1.4e-17 92.8 82 56.1
Hund22744 Selenicereus undatus HOM05D000572 ORTHO05D000840 1.4e-17 92.8 82 61.0
Thecc.04G227900 Theobroma cacao HOM05D000572 ORTHO05D000840 1.4e-17 92.8 82 58.5
CAN.G907.24 Capsicum annuum HOM05D000572 ORTHO05D000840 2.5e-17 92.0 85 52.9
SalBow5G2083 Salvia bowleyana HOM05D000572 ORTHO05D000840 3.2e-17 91.7 85 57.6
Solyc09g075800.4 Solanum lycopersicum HOM05D000572 ORTHO05D000840 3.2e-17 91.7 82 56.1
Sopen09g030610 Solanum pennellii HOM05D000572 ORTHO05D000840 3.2e-17 91.7 82 56.1
THA.LOC104802763 Tarenaya hassleriana HOM05D000572 ORTHO05D000840 3.2e-17 91.7 88 58.0
HPP92_024872 Vanilla planifolia HOM05D000572 ORTHO05D000840 5.5e-17 90.9 82 58.5
ECA240G0830 Erigeron canadensis HOM05D000572 ORTHO05D000840 7.2e-17 90.5 93 54.8
FAN27G1198 Fragaria x ananassa HOM05D000572 ORTHO05D019165 7.2e-17 90.5 48 85.4
HanXRQChr10g0303141 Helianthus annuus HOM05D000572 ORTHO05D000840 7.2e-17 90.5 86 61.6
TAR636G1672 Trochodendron aralioides HOM05D000572 ORTHO05D000840 7.2e-17 90.5 72 63.9
COL.COLO4_06192 Corchorus olitorius HOM05D000572 ORTHO05D000840 9.3e-17 90.1 72 59.7
Sed0002312 Sechium edule HOM05D000572 ORTHO05D000840 1.2e-16 89.7 100 49.0
Duzib151G0489 Durio zibethinus HOM05D000572 ORTHO05D000840 2.7e-16 88.6 72 59.7
Potri.010G090100 Populus trichocarpa HOM05D000572 ORTHO05D000840 6.1e-16 87.4 82 58.5
SGA_v2.0_scaffold10G05099 Striga asiatica HOM05D000572 ORTHO05D000840 7.9e-16 87.0 87 56.3
Nitab4.5_0008386g0010 Nicotiana tabacum HOM05D000572 ORTHO05D000840 1.8e-15 85.9 86 51.2
MSTRG.21845 Avicennia marina HOM05D000572 ORTHO05D000840 2.3e-15 85.5 86 57.0
Nitab4.5_0000795g0040 Nicotiana tabacum HOM05D000572 ORTHO05D000840 5.1e-15 84.3 90 51.1
Aa31LG11G10300 Aethionema arabicum HOM05D000572 ORTHO05D000840 6.7e-15 84.0 82 56.1
ATR0332G025 Amborella trichopoda HOM05D000572 ORTHO05D000840 6.7e-15 84.0 87 54.0
DCAR_027188 Daucus carota HOM05D000572 ORTHO05D000840 3.7e-13 78.2 84 52.4
unitig_22.g6328 Utricularia gibba HOM05D000572 ORTHO05D000840 1.1e-12 76.6 87 54.0
Zm00001eb053800 Zea mays HOM05D000572 ORTHO05D000840 5.3e-12 74.3 75 54.7
Ca_24388_v3 Cicer arietinum L. HOM05D000572 ORTHO05D000840 1.2e-11 73.2 84 50.0
SalBow1G2778 Salvia bowleyana HOM05D009024 ORTHO05D012117 6.5e-10 67.4 64 57.8
Mapoly0061s0111 Marchantia polymorpha HOM05D000572 ORTHO05D000840 9.7e-06 53.5 86 37.2


User provided reference genes

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