Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.7e-154 549.3 271 100.0
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 3.9e-127 458.4 291 81.4
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.9e-122 441.4 313 75.4
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.6e-118 427.9 338 68.9
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.4e-113 413.3 300 74.0
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.0e-103 380.6 299 69.2
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.7e-93 345.5 262 70.6
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 3.4e-91 339.0 301 62.5
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.9e-89 333.2 303 60.7
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 8.8e-87 324.3 292 62.0
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 2.4e-84 316.2 251 66.1
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 3.1e-84 315.8 253 66.8
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 4.1e-84 315.5 280 62.5
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 4.5e-83 312.0 289 60.6
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 5.9e-83 311.6 269 62.8
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.7e-82 310.1 269 62.5
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.2e-82 309.7 232 72.8
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 2.9e-82 309.3 306 57.8
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 2.9e-82 309.3 273 62.6
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 2.9e-82 309.3 251 65.3
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 3.8e-82 308.9 251 63.7
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 5.0e-82 308.5 257 62.3
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 4.2e-81 305.4 253 63.2
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 5.5e-81 305.1 265 61.9
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 7.2e-81 304.7 269 62.5
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 9.4e-81 304.3 278 59.0
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.6e-80 303.5 252 63.5
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.6e-80 303.5 251 63.7
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.1e-80 303.1 288 58.7
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 2.7e-80 302.8 252 62.7
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 6.1e-80 301.6 277 61.4
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 6.1e-80 301.6 253 60.9
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.0e-79 300.8 252 63.5
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 1.8e-79 300.1 251 63.7
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.8e-79 300.1 253 61.7
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 3.0e-79 299.3 252 63.1
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.8e-79 297.7 253 63.2
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 8.8e-79 297.7 270 60.4
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 1.1e-78 297.4 253 61.3
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 2.6e-78 296.2 253 61.7
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 5.7e-78 295.0 251 62.5
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 9.7e-78 294.3 292 58.9
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.7e-77 293.5 253 62.8
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 1.7e-77 293.5 265 60.8
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 2.2e-77 293.1 251 63.7
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.2e-77 293.1 262 61.5
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.8e-77 292.7 278 55.4
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 3.7e-77 292.4 253 61.3
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 6.3e-77 291.6 253 61.7
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 6.3e-77 291.6 253 61.3
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 6.3e-77 291.6 283 58.0
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 3.1e-76 289.3 253 61.7
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 5.3e-76 288.5 263 57.8
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 7.0e-76 288.1 253 61.7
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.6e-75 287.0 252 61.5
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 2.0e-75 286.6 253 60.5
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 2.6e-75 286.2 251 62.9
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 5.9e-75 285.0 253 60.5
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 1.0e-74 284.3 282 56.4
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 1.0e-74 284.3 282 56.4
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 1.7e-74 283.5 246 61.0
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 3.8e-74 282.3 259 60.2
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 8.5e-74 281.2 253 58.5
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 8.5e-74 281.2 253 58.5
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 3.2e-73 279.3 252 59.9
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 4.2e-73 278.9 282 54.6
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 9.4e-73 277.7 255 57.6
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.7e-72 276.2 273 56.0
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 3.6e-72 275.8 277 55.2
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 6.1e-72 275.0 257 58.0
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 8.0e-72 274.6 271 55.0
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.0e-71 274.2 276 55.4
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.0e-71 274.2 252 59.5
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 1.0e-71 274.2 244 60.2
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.4e-71 273.9 268 55.2
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.4e-71 273.9 253 58.1
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.8e-71 271.2 312 50.6
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.2e-70 270.8 254 58.3
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 3.3e-70 269.2 240 59.2
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 9.7e-70 267.7 252 56.7
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.3e-69 267.3 251 57.0
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.2e-69 266.5 269 55.4
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 2.8e-69 266.2 252 56.7
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 8.2e-69 264.6 248 58.5
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 1.1e-68 264.2 275 53.8
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.1e-68 264.2 288 52.4
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 5.0e-66 255.4 255 56.1
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.5e-65 253.1 255 54.5
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 3.0e-63 246.1 201 65.2
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.5e-62 243.8 259 51.4
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 2.8e-61 239.6 229 59.0
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 3.7e-61 239.2 253 50.6
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 1.0e-58 231.1 231 56.3
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.6e-56 222.6 193 65.8
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.0e-56 221.5 193 65.3
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 2.3e-55 219.9 229 51.1
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.1e-49 201.1 251 48.6
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 3.4e-46 189.5 232 49.6
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 9.8e-46 188.0 182 58.8
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 6.4e-45 185.3 357 35.0
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 5.4e-44 182.2 112 76.8
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 3.0e-42 176.4 111 77.5
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.1e-41 174.5 123 71.5
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 1.2e-32 144.4 82 79.3
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.4e-28 131.0 91 68.1
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 4.1e-28 129.4 90 67.8
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 4.1e-28 129.4 91 69.2
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 3.0e-26 123.2 89 67.4
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 3.3e-25 119.8 85 68.2
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 5.6e-25 119.0 70 77.1
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 8.4e-21 105.1 67 73.1
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 4.2e-20 102.8 66 71.2
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 3.0e-18 96.7 60 73.3
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 3.6e-16 89.7 61 67.2
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.0e-15 85.1 56 69.6
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 9.6e-09 65.1 44 68.2
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.6e-08 63.2 44 72.7
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 5.3e-07 59.3 38 65.8


User provided reference genes

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