Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 1.2e-54 216.1 100 100.0
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.9e-51 204.1 100 95.0
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 1.4e-50 202.6 100 94.0
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.9e-50 202.2 99 93.9
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 3.5e-49 198.0 100 91.0
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.5e-44 182.6 90 92.2
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.5e-44 182.6 90 92.2
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 1.3e-43 179.5 95 84.2
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.7e-43 177.9 86 94.2
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 6.4e-43 177.2 95 82.1
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.4e-42 176.0 95 83.2
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.3e-40 169.5 93 80.6
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 2.3e-40 168.7 94 80.9
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 3.0e-40 168.3 96 76.0
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 3.9e-40 167.9 95 78.9
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 3.9e-40 167.9 92 81.5
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 3.9e-40 167.9 92 81.5
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 3.9e-40 167.9 92 81.5
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 5.1e-40 167.5 93 79.6
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 5.1e-40 167.5 92 80.4
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 1.9e-39 165.6 93 78.5
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 2.5e-39 165.2 94 76.6
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 2.5e-39 165.2 92 79.3
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 2.5e-39 165.2 93 76.3
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 2.5e-39 165.2 93 76.3
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 3.3e-39 164.9 97 74.2
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 4.3e-39 164.5 91 80.2
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.3e-39 164.5 93 77.4
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.3e-39 164.5 93 77.4
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 5.6e-39 164.1 93 78.5
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 5.6e-39 164.1 94 76.6
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 5.6e-39 164.1 92 78.3
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 5.6e-39 164.1 92 79.3
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 5.6e-39 164.1 92 79.3
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 5.6e-39 164.1 93 78.5
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 7.3e-39 163.7 93 78.5
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 9.5e-39 163.3 93 76.3
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.2e-38 162.9 91 79.1
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 1.2e-38 162.9 96 75.0
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 1.2e-38 162.9 92 79.3
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.6e-38 162.5 91 79.1
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.6e-38 162.5 91 79.1
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.6e-38 162.5 93 76.3
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 1.6e-38 162.5 93 75.3
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 2.1e-38 162.2 93 75.3
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 4.7e-38 161.0 93 73.1
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 4.7e-38 161.0 92 78.3
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 6.2e-38 160.6 93 75.3
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 8.1e-38 160.2 98 70.4
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 8.1e-38 160.2 98 70.4
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 8.1e-38 160.2 91 75.8
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 1.1e-37 159.8 94 73.4
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.4e-37 159.5 93 76.3
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 2.4e-37 158.7 89 77.5
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 2.4e-37 158.7 93 75.3
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 3.1e-37 158.3 92 75.0
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 3.1e-37 158.3 95 72.6
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 3.1e-37 158.3 99 69.7
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 4.0e-37 157.9 91 78.0
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 5.2e-37 157.5 91 76.9
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 5.2e-37 157.5 95 72.6
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 5.2e-37 157.5 91 74.7
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 6.8e-37 157.1 96 66.7
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.8e-37 157.1 93 74.2
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.8e-37 157.1 93 74.2
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 6.8e-37 157.1 91 75.8
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 8.9e-37 156.8 93 74.2
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.5e-36 156.0 92 72.8
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.5e-36 156.0 91 75.8
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 2.0e-36 155.6 92 72.8
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 2.0e-36 155.6 99 68.7
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 2.6e-36 155.2 93 73.1
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 3.4e-36 154.8 92 71.7
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 3.4e-36 154.8 89 77.5
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 4.4e-36 154.5 89 75.3
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 4.4e-36 154.5 95 67.4
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.4e-36 154.5 93 71.0
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 4.4e-36 154.5 93 74.2
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 4.4e-36 154.5 103 67.0
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 5.8e-36 154.1 113 64.6
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 7.6e-36 153.7 92 70.7
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 7.6e-36 153.7 93 69.9
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 9.9e-36 153.3 94 71.3
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 9.9e-36 153.3 97 69.1
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 9.9e-36 153.3 92 71.7
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 2.9e-35 151.8 92 69.6
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 3.8e-35 151.4 92 72.8
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.9e-35 151.0 93 69.9
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 4.9e-35 151.0 94 72.3
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 6.4e-35 150.6 90 70.0
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.4e-34 149.4 96 70.8
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.2e-34 148.3 93 69.9
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 3.2e-34 148.3 99 65.7
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 4.2e-34 147.9 93 72.0
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 1.2e-33 146.4 102 65.7
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.1e-33 145.6 92 68.5
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.1e-33 145.6 92 68.5
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 2.7e-33 145.2 115 59.1
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 3.5e-33 144.8 92 66.3
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 4.6e-33 144.4 89 68.5
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 4.6e-33 144.4 89 68.5
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 1.7e-32 142.5 89 68.5
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 5.1e-32 141.0 95 68.4
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 5.1e-32 141.0 99 63.6
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 6.6e-32 140.6 95 68.4
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 8.7e-32 140.2 93 68.8
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 8.7e-32 140.2 93 68.8
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 8.7e-32 140.2 93 68.8
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 1.1e-31 139.8 95 66.3
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 1.5e-31 139.4 95 66.3
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 2.5e-31 138.7 93 67.7
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 2.5e-31 138.7 93 67.7
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 2.5e-31 138.7 93 67.7
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 2.5e-31 138.7 93 67.7
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 2.5e-31 138.7 93 67.7
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 2.5e-31 138.7 93 65.6
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 4.3e-31 137.9 78 78.2
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 5.6e-31 137.5 91 67.0
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 7.3e-31 137.1 93 66.7
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 9.6e-31 136.7 93 67.7
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.3e-30 136.3 81 72.8
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 3.1e-29 131.7 87 63.2
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.8e-28 127.5 104 57.7
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.9e-27 125.2 61 98.4
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.9e-26 122.5 78 71.8
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 7.1e-26 120.6 80 68.8
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 1.0e-24 116.7 69 73.9
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.3e-24 115.5 89 56.2
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 4.3e-23 111.3 74 66.2
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 7.3e-23 110.5 68 72.1
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 2.4e-21 105.5 65 70.8
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 2.9e-19 98.6 72 62.5
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 5.4e-18 94.4 61 72.1
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.2e-17 93.2 61 68.9
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 1.6e-14 82.8 68 55.9
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 1.8e-13 79.3 80 45.0
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.2e-09 66.6 36 72.2
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 1.6e-09 66.2 61 54.1


User provided reference genes

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