Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g24800 Fragaria vesca HOM05D003590 ORTHO05D004290 1.4e-57 226.1 117 100.0
FAN19G0592 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.6e-37 159.5 88 96.6
FAN26G3423 Fragaria x ananassa HOM05D003590 ORTHO05D004290 9.8e-35 150.2 88 90.9
FAN19G0667 Fragaria x ananassa HOM05D003590 ORTHO05D004290 9.5e-30 133.7 87 83.9
MD17G1177400 Malus domestica HOM05D003590 ORTHO05D004290 1.8e-28 129.4 88 80.7
Prupe.1G203200 Prunus persica HOM05D003590 ORTHO05D004290 1.7e-26 122.9 88 77.3
RcHm_v2.0_Chr2g0122441 Rosa chinensis HOM05D003590 ORTHO05D004290 1.7e-26 122.9 94 76.6
MD00G1019200 Malus domestica HOM05D003590 ORTHO05D004290 6.4e-26 120.9 88 77.3
FAN27G0950 Fragaria x ananassa HOM05D003590 ORTHO05D004290 8.3e-26 120.6 88 78.4
FAN24G1875 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.9e-25 119.4 88 78.4
FAN15G3511 Fragaria x ananassa HOM05D003590 ORTHO05D004290 3.2e-25 118.6 88 77.3
FvH4_2g19990 Fragaria vesca HOM05D003590 ORTHO05D004290 5.4e-25 117.9 88 77.3
RcHm_v2.0_Chr6g0285711 Rosa chinensis HOM05D003590 ORTHO05D004290 3.5e-24 115.2 91 72.5
RcHm_v2.0_Chr5g0028111 Rosa chinensis HOM05D003590 ORTHO05D004290 5.8e-19 97.8 88 63.6
FvH4_6g53380 Fragaria vesca HOM05D003590 ORTHO05D004290 1.7e-18 96.3 88 69.3
FvH4_3g16870 Fragaria vesca HOM05D003590 ORTHO05D004290 1.1e-17 93.6 88 63.6
Cfa015230 Carpinus fangiana HOM05D003590 ORTHO05D004290 3.5e-16 88.6 88 63.6
CANSAT64G0301 Cannabis sativa HOM05D003590 ORTHO05D004290 4.6e-16 88.2 88 62.5
Dinv33190 Davidia involucrata HOM05D003590 ORTHO05D004290 4.6e-16 88.2 88 60.2
Ciclev10021047m.g Citrus clementina HOM05D003590 ORTHO05D004290 7.8e-16 87.4 88 58.0
Atru.chr4.1363 Acer truncatum HOM05D003590 ORTHO05D004290 8.6e-15 84.0 89 59.6
CiPaw.01G172800 Carya illinoinensis HOM05D003590 ORTHO05D004290 1.5e-14 83.2 88 58.0
CANSAT11G1461 Cannabis sativa HOM05D003590 ORTHO05D004290 1.9e-14 82.8 89 58.4
ClCG07G015120 Citrullus lanatus HOM05D003590 ORTHO05D004290 3.3e-14 82.0 88 53.4
CiPaw.02G102900 Carya illinoinensis HOM05D003590 ORTHO05D004290 9.5e-14 80.5 83 63.9
MELO3C017774.2 Cucumis melo HOM05D003590 ORTHO05D004290 9.5e-14 80.5 88 52.3
Duzib151G0409 Durio zibethinus HOM05D003590 ORTHO05D004290 1.2e-13 80.1 91 52.7
Gohir.A10G141800 Gossypium hirsutum HOM05D003590 ORTHO05D004290 3.6e-13 78.6 88 50.0
Gohir.D10G124700 Gossypium hirsutum HOM05D003590 ORTHO05D004290 3.6e-13 78.6 88 50.0
Gorai.011G137800 Gossypium raimondii HOM05D003590 ORTHO05D004290 3.6e-13 78.6 88 50.0
TAR362G0082 Trochodendron aralioides HOM05D003590 ORTHO05D004290 4.7e-13 78.2 88 59.1
CsaV3_4G002670 Cucumis sativus L. HOM05D003590 ORTHO05D004290 6.2e-13 77.8 88 51.1
Cpa.g.sc9.339 Carica papaya HOM05D003590 ORTHO05D004290 1.4e-12 76.6 88 52.3
QL10p052769 Quercus lobata HOM05D003590 ORTHO05D004290 2.3e-12 75.9 97 54.6
Duzib212G0521 Durio zibethinus HOM05D003590 ORTHO05D004290 9.9e-11 70.5 88 46.6
MBI07_g22611_MAGBIO Magnolia biondii HOM05D003590 ORTHO05D004290 1.3e-10 70.1 88 51.1
Sed0008844 Sechium edule HOM05D003590 ORTHO05D004290 1.3e-10 70.1 88 50.0
Thecc.04G169500 Theobroma cacao HOM05D003590 ORTHO05D004290 1.7e-10 69.7 90 50.0
Manes.11G128000 Manihot esculenta HOM05D003590 ORTHO05D004290 6.4e-10 67.8 95 51.6
Rhsim09G0012200 Rhododendron simsii HOM05D003590 ORTHO05D004290 6.4e-10 67.8 88 53.4
CSS0039108 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 1.4e-09 66.6 88 50.0
CSS0008581 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 2.4e-09 65.9 88 50.0
Dinv15385 Davidia involucrata HOM05D003590 ORTHO05D004290 3.2e-09 65.5 89 58.4
Gohir.A02G091600 Gossypium hirsutum HOM05D003590 ORTHO05D004290 9.2e-09 63.9 92 45.7
Eucgr.A00018 Eucalyptus grandis HOM05D003590 ORTHO05D004290 1.2e-08 63.5 89 50.6
Gohir.D02G109000 Gossypium hirsutum HOM05D003590 ORTHO05D004290 1.2e-08 63.5 92 45.7
Sabra16G0098800 Salix brachista HOM05D003590 ORTHO05D004290 1.2e-08 63.5 88 46.6
Dinv29086 Davidia involucrata HOM05D003590 ORTHO05D004290 2.1e-08 62.8 89 52.8
Manes.04G049785 Manihot esculenta HOM05D003590 ORTHO05D004290 2.7e-08 62.4 94 47.9
Glyma.12G049400 Glycine max HOM05D003590 ORTHO05D004290 3.5e-08 62.0 89 50.6
Phvul.008G099200 Phaseolus vulgaris HOM05D003590 ORTHO05D004290 3.5e-08 62.0 89 49.4
vmacro00650 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 3.5e-08 62.0 88 47.7
Glyma.11G124800 Glycine max HOM05D003590 ORTHO05D004290 4.6e-08 61.6 89 50.6
Duzib268G1650 Durio zibethinus HOM05D003590 ORTHO05D004290 6.0e-08 61.2 90 44.4
Nn1g09673 Nelumbo nucifera HOM05D003590 ORTHO05D004290 7.8e-08 60.8 88 50.0
Sabra06G0097800 Salix brachista HOM05D003590 ORTHO05D004290 1.3e-07 60.1 94 46.8
vmacro00679 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 1.7e-07 59.7 88 46.6
Potri.006G123600 Populus trichocarpa HOM05D003590 ORTHO05D004290 2.3e-07 59.3 95 45.3
Sc06g0005010 Simmondsia chinensis HOM05D003590 ORTHO05D004290 2.3e-07 59.3 79 48.1
Gorai.005G124600 Gossypium raimondii HOM05D003590 ORTHO05D004290 3.9e-07 58.5 92 45.7
Sed0014148 Sechium edule HOM05D003590 ORTHO05D004290 3.9e-07 58.5 88 47.7
PSO384G2196 Papaver somniferum HOM05D003590 ORTHO05D004290 8.6e-07 57.4 88 43.2
Actinidia27105 Actinidia chinensis HOM05D003590 ORTHO05D004290 1.9e-06 56.2 88 43.2
CDE08G0825 Ceratophyllum demersum HOM05D003590 ORTHO05D004290 1.9e-06 56.2 88 45.5
arahy.Tifrunner.gnm1.ann1.SY3MF3 Arachis hypogaea HOM05D003590 ORTHO05D004290 2.5e-06 55.8 88 46.6
Lalb_Chr19g0138461 Lupinus albus HOM05D003590 ORTHO05D004290 2.5e-06 55.8 92 44.6
Potri.016G099400 Populus trichocarpa HOM05D003590 ORTHO05D004290 2.5e-06 55.8 93 41.9
Lj3g0023284 Lotus japonicus HOM05D003590 ORTHO05D004290 7.3e-06 54.3 90 47.8
Nn7g37627 Nelumbo nucifera HOM05D003590 ORTHO05D004290 7.3e-06 54.3 88 47.7


User provided reference genes

Program Settings