Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 2.8e-85 318.5 160 100.0
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.1e-84 316.6 160 99.4
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 9.1e-84 313.5 160 98.8
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 9.1e-84 313.5 160 98.8
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 4.5e-83 311.2 160 98.1
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 8.0e-80 300.4 165 93.3
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 1.1e-60 236.9 167 73.7
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 5.4e-60 234.6 160 78.1
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 9.5e-57 223.8 165 73.9
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 1.6e-56 223.0 165 76.4
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 1.6e-56 223.0 161 75.8
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 2.8e-56 222.2 159 71.1
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 3.6e-56 221.9 160 71.9
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 1.1e-55 220.3 159 71.1
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 3.1e-55 218.8 159 74.2
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 3.1e-55 218.8 160 71.2
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 5.2e-55 218.0 162 72.2
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 8.9e-55 217.2 163 71.8
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 1.2e-54 216.9 160 72.5
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 2.0e-54 216.1 160 72.5
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 3.4e-54 215.3 175 69.7
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 4.4e-54 214.9 160 72.5
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 9.9e-54 213.8 161 70.2
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 1.7e-53 213.0 175 69.1
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 2.9e-53 212.2 153 75.2
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 1.1e-52 210.3 170 71.2
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 1.9e-52 209.5 162 71.0
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 2.4e-52 209.1 160 69.4
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 3.2e-52 208.8 160 71.2
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 4.1e-52 208.4 164 67.7
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 4.1e-52 208.4 175 68.0
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 4.1e-52 208.4 161 67.1
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 5.4e-52 208.0 166 66.9
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 9.2e-52 207.2 153 73.2
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 1.6e-51 206.5 157 73.9
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 3.5e-51 205.3 162 69.1
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 3.5e-51 205.3 150 70.7
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 4.6e-51 204.9 168 69.0
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 6.0e-51 204.5 170 66.5
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 7.8e-51 204.1 165 66.1
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 1.3e-50 203.4 162 67.9
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 1.3e-50 203.4 161 66.5
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 1.7e-50 203.0 162 67.9
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 1.7e-50 203.0 168 67.3
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 1.7e-50 203.0 161 66.5
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 3.0e-50 202.2 170 66.5
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 3.0e-50 202.2 161 68.9
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 3.9e-50 201.8 162 68.5
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.1e-49 200.3 159 71.1
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 2.5e-49 199.1 163 66.9
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 3.3e-49 198.7 157 69.4
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 4.3e-49 198.4 162 67.9
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 1.6e-48 196.4 166 66.3
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 2.8e-48 195.7 162 67.9
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.4e-47 193.4 123 76.4
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 1.8e-47 193.0 174 63.8
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 1.8e-47 193.0 161 63.4
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 3.1e-47 192.2 163 65.6
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 3.1e-47 192.2 163 65.6
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 3.1e-47 192.2 128 75.8
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 4.0e-47 191.8 172 61.6
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 8.9e-47 190.7 168 67.9
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 8.9e-47 190.7 156 67.3
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 1.5e-46 189.9 97 90.7
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 1.5e-46 189.9 156 64.1
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 2.0e-46 189.5 162 65.4
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 9.9e-46 187.2 163 65.0
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 9.9e-46 187.2 94 90.4
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 2.9e-45 185.7 92 91.3
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 3.8e-45 185.3 157 65.0
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 6.4e-45 184.5 92 91.3
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 1.4e-44 183.3 171 61.4
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 3.2e-44 182.2 156 65.4
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 9.2e-44 180.6 158 62.7
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 1.2e-43 180.3 168 60.7
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 3.5e-43 178.7 162 62.3
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 4.6e-43 178.3 183 55.2
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 7.8e-43 177.6 180 58.3
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 1.3e-42 176.8 155 63.2
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 2.3e-42 176.0 172 59.9
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 2.5e-41 172.6 182 58.2
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 3.3e-41 172.2 86 90.7
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 9.6e-41 170.6 170 58.2
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 1.6e-40 169.9 115 72.2
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 1.6e-40 169.9 151 63.6
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 3.6e-40 168.7 154 63.6
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 4.7e-40 168.3 83 95.2
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 1.8e-39 166.4 86 87.2
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 4.0e-39 165.2 167 56.9
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 1.7e-37 159.8 81 90.1
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 8.4e-37 157.5 161 55.9
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 2.1e-35 152.9 82 86.6
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 4.6e-35 151.8 80 85.0
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 6.6e-34 147.9 87 74.7
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 1.5e-33 146.7 75 86.7
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 5.6e-33 144.8 77 84.4
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 1.6e-32 143.3 137 62.8
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 8.1e-32 141.0 147 52.4
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 8.1e-32 141.0 162 50.6
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 1.7e-29 133.3 68 85.3
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 2.2e-29 132.9 94 67.0
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 1.4e-23 113.6 95 65.3
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 9.3e-20 100.9 119 56.3
Actinidia06621 Actinidia chinensis HOM05D007437 ORTHO05D009422 2.6e-06 56.2 92 50.0


User provided reference genes

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