Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 1.4e-43 179.1 85 100.0
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 9.3e-19 96.7 47 97.9
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 2.1e-18 95.5 51 90.2
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.1e-18 95.5 51 90.2
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.1e-18 95.5 51 90.2
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.1e-18 95.5 51 90.2
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 2.1e-18 95.5 59 78.0
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.3e-17 92.8 78 66.7
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.3e-17 92.0 47 91.5
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 1.5e-16 89.4 58 75.9
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 4.3e-16 87.8 58 74.1
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 4.3e-16 87.8 58 74.1
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 4.3e-16 87.8 58 74.1
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 4.3e-16 87.8 51 80.4
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 5.7e-16 87.4 58 75.9
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 9.7e-16 86.7 59 69.5
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 1.6e-15 85.9 58 74.1
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 1.6e-15 85.9 58 70.7
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 2.2e-15 85.5 48 83.3
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 2.8e-15 85.1 58 72.4
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 3.7e-15 84.7 58 72.4
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 3.7e-15 84.7 58 72.4
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 3.7e-15 84.7 58 72.4
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 4.8e-15 84.3 48 83.3
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 4.8e-15 84.3 48 83.3
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 4.8e-15 84.3 59 69.5
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 4.8e-15 84.3 58 72.4
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 6.3e-15 84.0 58 70.7
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 6.3e-15 84.0 58 70.7
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 6.3e-15 84.0 58 72.4
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 8.2e-15 83.6 48 83.3
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 8.2e-15 83.6 58 69.0
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 1.1e-14 83.2 48 79.2
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 1.1e-14 83.2 58 70.7
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 1.4e-14 82.8 48 79.2
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 1.4e-14 82.8 58 70.7
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 1.4e-14 82.8 48 81.2
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 2.4e-14 82.0 58 65.5
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 3.1e-14 81.6 58 70.7
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 3.1e-14 81.6 58 69.0
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 3.1e-14 81.6 58 63.8
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 3.1e-14 81.6 58 67.2
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 3.1e-14 81.6 58 70.7
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 3.1e-14 81.6 58 70.7
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 4.1e-14 81.3 48 81.2
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 4.1e-14 81.3 54 68.5
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 4.1e-14 81.3 58 69.0
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 6.9e-14 80.5 58 69.0
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 6.9e-14 80.5 48 77.1
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 6.9e-14 80.5 58 63.8
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 6.9e-14 80.5 46 78.3
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 6.9e-14 80.5 58 69.0
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 9.0e-14 80.1 48 77.1
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 9.0e-14 80.1 48 77.1
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 9.0e-14 80.1 48 77.1
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 9.0e-14 80.1 59 64.4
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 9.0e-14 80.1 48 77.1
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 9.0e-14 80.1 48 77.1
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 1.2e-13 79.7 58 69.0
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 1.2e-13 79.7 56 66.1
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 1.5e-13 79.3 58 69.0
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 2.0e-13 79.0 58 67.2
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 2.0e-13 79.0 48 77.1
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 4.5e-13 77.8 48 77.1
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 4.5e-13 77.8 48 72.9
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 4.5e-13 77.8 48 75.0
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 4.5e-13 77.8 48 75.0
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.0e-12 76.6 53 66.0
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 1.7e-12 75.9 48 72.9
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.4e-11 72.8 58 60.3
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 2.5e-11 72.0 48 66.7
RcHm_v2.0_Chr2g0121491 Rosa chinensis HOM05D007927 ORTHO05D010029 2.1e-10 68.9 36 77.8
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 4.6e-10 67.8 58 56.9
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 4.6e-10 67.8 46 65.2
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 3.0e-09 65.1 40 72.5
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 1.9e-08 62.4 58 51.7
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 1.3e-07 59.7 40 65.0
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 6.9e-06 53.9 30 80.0


User provided reference genes

Program Settings