Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 2.6e-104 382.1 199 100.0
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 8.4e-103 377.1 199 98.5
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 2.3e-92 342.4 199 91.5
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 4.6e-61 238.4 191 72.3
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 1.1e-59 233.8 204 65.7
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 8.2e-58 227.6 207 63.3
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 8.2e-58 227.6 206 65.0
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.1e-57 227.3 205 60.0
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 2.0e-56 223.0 203 60.6
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 7.7e-56 221.1 203 61.6
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.3e-55 220.3 207 58.5
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 1.3e-55 220.3 201 60.7
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.7e-55 219.9 203 57.6
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.7e-55 219.9 206 61.2
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 2.9e-55 219.2 199 59.3
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.9e-55 219.2 208 61.5
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 3.8e-55 218.8 205 62.4
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 5.0e-55 218.4 202 60.9
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 5.0e-55 218.4 200 60.5
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 6.5e-55 218.0 202 61.9
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 8.5e-55 217.6 196 61.2
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 8.5e-55 217.6 203 61.1
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 8.5e-55 217.6 202 60.4
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 1.4e-54 216.9 205 59.0
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.5e-54 216.1 204 62.3
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 2.5e-54 216.1 204 61.3
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.5e-54 216.1 208 61.1
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 3.2e-54 215.7 199 62.3
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.2e-54 215.7 201 62.2
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 4.2e-54 215.3 202 60.9
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 5.5e-54 214.9 209 57.9
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 5.5e-54 214.9 209 57.9
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 5.5e-54 214.9 209 57.9
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 7.2e-54 214.5 206 57.8
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 7.2e-54 214.5 211 56.9
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 1.2e-53 213.8 209 57.4
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 1.2e-53 213.8 201 61.7
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 1.6e-53 213.4 203 60.6
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 1.6e-53 213.4 216 58.3
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 2.1e-53 213.0 203 59.6
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 3.6e-53 212.2 204 59.8
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 3.6e-53 212.2 210 56.2
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 4.7e-53 211.8 199 56.8
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 4.7e-53 211.8 203 60.1
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 4.7e-53 211.8 203 60.1
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 6.1e-53 211.5 201 59.7
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.4e-52 210.3 209 57.4
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.4e-52 210.3 161 70.2
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.4e-52 210.3 201 59.7
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 1.4e-52 210.3 202 60.4
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.4e-52 210.3 204 61.3
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.8e-52 209.9 201 61.7
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 5.2e-52 208.4 209 56.5
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 6.7e-52 208.0 109 97.2
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 6.7e-52 208.0 209 55.5
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 2.6e-51 206.1 208 56.2
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 4.4e-51 205.3 207 58.0
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 5.7e-51 204.9 212 55.7
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 7.4e-51 204.5 199 60.3
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 2.8e-50 202.6 210 57.1
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 4.8e-50 201.8 214 55.6
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 8.2e-50 201.1 212 57.5
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.1e-49 200.7 198 56.6
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.1e-49 200.7 199 59.8
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 1.4e-49 200.3 206 57.3
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 1.4e-49 200.3 206 54.9
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.8e-49 199.9 205 57.6
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.8e-49 199.9 207 56.5
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 2.4e-49 199.5 206 56.8
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 2.4e-49 199.5 210 54.8
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 3.1e-49 199.1 212 55.7
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 2.6e-48 196.1 205 56.1
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 2.6e-48 196.1 197 60.4
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 4.5e-48 195.3 177 61.6
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 5.9e-48 194.9 194 57.7
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 7.7e-48 194.5 192 58.3
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 1.7e-47 193.4 199 53.8
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 1.1e-46 190.7 193 57.5
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 1.9e-46 189.9 176 58.5
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 3.2e-46 189.1 198 55.6
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 1.6e-45 186.8 205 52.2
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.1e-45 186.4 182 56.6
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 3.6e-45 185.7 176 56.8
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 5.2e-44 181.8 183 55.7
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 6.7e-44 181.4 149 62.4
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 2.0e-43 179.9 147 65.3
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 4.4e-43 178.7 194 54.6
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.3e-42 177.2 200 51.5
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 2.8e-42 176.0 197 53.3
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 3.7e-42 175.6 204 49.5
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 4.8e-42 175.3 158 58.2
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.4e-41 173.7 157 57.3
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.2e-40 170.6 157 56.7
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 4.5e-40 168.7 207 48.3
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 4.5e-40 168.7 203 49.3
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 5.9e-40 168.3 206 48.5
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 2.9e-39 166.0 207 49.8
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 2.5e-38 162.9 211 47.9
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 3.4e-35 152.5 150 54.7
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 3.4e-35 152.5 188 44.7
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 2.8e-34 149.4 156 50.6
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 5.4e-33 145.2 149 53.0
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 1.9e-30 136.7 151 47.7
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 5.2e-28 128.6 92 68.5
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 7.5e-19 98.2 147 40.8
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.7e-18 97.1 160 40.6
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 7.0e-17 91.7 120 50.8
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.0e-15 87.8 145 34.5
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 8.6e-15 84.7 147 33.3
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 2.1e-13 80.1 157 35.0
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 1.8e-12 77.0 141 31.9
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 1.2e-11 74.3 88 50.0
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.5e-11 73.9 161 30.4
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 1.5e-11 73.9 96 43.8
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 5.4e-09 65.5 141 30.5
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.5e-08 62.8 143 30.1


User provided reference genes

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