Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g21700 Fragaria vesca HOM05D002691 ORTHO05D046115 1.9e-68 262.3 128 100.0
FAN12G3014 Fragaria x ananassa HOM05D002691 ORTHO05D046115 1.4e-13 80.1 124 42.7
FAN21G2170 Fragaria x ananassa HOM05D002691 ORTHO05D003304 2.3e-13 79.3 65 60.0
FvH4_3g42290 Fragaria vesca HOM05D002691 ORTHO05D003304 8.8e-13 77.4 65 58.5
FAN16G2066 Fragaria x ananassa HOM05D002691 ORTHO05D003304 8.8e-13 77.4 91 47.3
FAN11G2387 Fragaria x ananassa HOM05D002691 ORTHO05D003304 2.6e-12 75.9 65 56.9
RcHm_v2.0_Chr5g0075621 Rosa chinensis HOM05D002691 ORTHO05D003304 4.4e-12 75.1 48 70.8
MD03G1034900 Malus domestica HOM05D002691 ORTHO05D003304 1.8e-10 69.7 65 53.8
CSS0014758 Camellia sinensis var. sinensis HOM05D002691 ORTHO05D003304 5.4e-10 68.2 44 72.7
CSS0038645 Camellia sinensis var. sinensis HOM05D002691 ORTHO05D003304 5.4e-10 68.2 44 72.7
MD11G1036800 Malus domestica HOM05D002691 ORTHO05D003304 9.1e-10 67.4 44 68.2
Prupe.6G028100 Prunus persica HOM05D002691 ORTHO05D003304 9.1e-10 67.4 65 52.3
AUR62017131 Chenopodium quinoa HOM05D002691 ORTHO05D003304 1.2e-09 67.0 49 59.2
Atru.chr8.1594 Acer truncatum HOM05D002691 ORTHO05D003304 1.6e-09 66.6 48 68.8
Dinv40884 Davidia involucrata HOM05D002691 ORTHO05D003304 1.6e-09 66.6 86 45.3
Gorai.002G102700 Gossypium raimondii HOM05D002691 ORTHO05D003304 2.0e-09 66.2 44 70.5
Cc05_g15270 Coffea canephora HOM05D002691 ORTHO05D003304 2.7e-09 65.9 45 66.7
Gohir.D01G078100 Gossypium hirsutum HOM05D002691 ORTHO05D003304 4.5e-09 65.1 44 68.2
EL10Ac4g07539 Beta vulgaris HOM05D002691 ORTHO05D003304 5.9e-09 64.7 44 63.6
AUR62035678 Chenopodium quinoa HOM05D002691 ORTHO05D003304 5.9e-09 64.7 78 50.0
Gohir.A01G093600 Gossypium hirsutum HOM05D002691 ORTHO05D003304 5.9e-09 64.7 44 68.2
Ciclev10008832m.g Citrus clementina HOM05D002691 ORTHO05D003304 1.0e-08 63.9 44 68.2
Duzib170G0390 Durio zibethinus HOM05D002691 ORTHO05D003304 1.7e-08 63.2 44 65.9
Nitab4.5_0002216g0020 Nicotiana tabacum HOM05D002691 ORTHO05D003304 2.2e-08 62.8 44 63.6
Nitab4.5_0006469g0010 Nicotiana tabacum HOM05D002691 ORTHO05D003304 2.2e-08 62.8 44 63.6
Actinidia37320 Actinidia chinensis HOM05D002691 ORTHO05D003304 2.9e-08 62.4 44 65.9
AUR62035675 Chenopodium quinoa HOM05D002691 ORTHO05D003304 2.9e-08 62.4 44 63.6
Nitab4.5_0005478g0020 Nicotiana tabacum HOM05D002691 ORTHO05D003304 2.9e-08 62.4 44 65.9
Nitab4.5_0008375g0020 Nicotiana tabacum HOM05D002691 ORTHO05D003304 2.9e-08 62.4 44 63.6
Solyc10g005820.3 Solanum lycopersicum HOM05D002691 ORTHO05D003304 2.9e-08 62.4 45 64.4
Sopen10g001780 Solanum pennellii HOM05D002691 ORTHO05D003304 2.9e-08 62.4 45 64.4
ECA246G4737 Erigeron canadensis HOM05D002691 ORTHO05D003304 3.8e-08 62.0 65 49.2
HanXRQChr05g0160311 Helianthus annuus HOM05D002691 ORTHO05D003304 3.8e-08 62.0 53 58.5
HanXRQChr08g0232671 Helianthus annuus HOM05D002691 ORTHO05D003304 3.8e-08 62.0 65 47.7
Hma1.2p1_0193F.1_g083900 Hydrangea macrophylla HOM05D002691 ORTHO05D003304 3.8e-08 62.0 65 47.7
Hund23087 Selenicereus undatus HOM05D002691 ORTHO05D003304 3.8e-08 62.0 44 63.6
vmacro09624 Vaccinium macrocarpon HOM05D002691 ORTHO05D003304 3.8e-08 62.0 78 44.9
Ah.06g181480 Amaranthus hybridus HOM05D002691 ORTHO05D003304 5.0e-08 61.6 44 61.4
Duzib213G0749 Durio zibethinus HOM05D002691 ORTHO05D003304 5.0e-08 61.6 44 65.9
ClCG09G021520 Citrullus lanatus HOM05D002691 ORTHO05D003304 6.5e-08 61.2 44 63.6
Nitab4.5_0003328g0080 Nicotiana tabacum HOM05D002691 ORTHO05D003304 6.5e-08 61.2 45 64.4
TWI38G1555 Tripterygium wilfordii HOM05D002691 ORTHO05D003304 6.5e-08 61.2 44 68.2
Rhsim04G0010600 Rhododendron simsii HOM05D002691 ORTHO05D003304 8.5e-08 60.8 44 61.4
PGSC0003DMG400008690 Solanum tuberosum HOM05D002691 ORTHO05D003304 8.5e-08 60.8 45 62.2
DCAR_017068 Daucus carota HOM05D002691 ORTHO05D003304 1.1e-07 60.5 78 44.9
Hma1.2p1_3473F.1_g336260 Hydrangea macrophylla HOM05D002691 ORTHO05D003304 1.1e-07 60.5 49 55.1
Manes.03G143700 Manihot esculenta HOM05D002691 ORTHO05D003304 1.1e-07 60.5 44 65.9
Peaxi162Scf00006g00522 Petunia axillaris HOM05D002691 ORTHO05D003304 1.1e-07 60.5 44 61.4
CAN.G492.52 Capsicum annuum HOM05D002691 ORTHO05D003304 1.5e-07 60.1 45 62.2
CSS0023388 Camellia sinensis var. sinensis HOM05D002691 ORTHO05D003304 1.9e-07 59.7 78 46.2
CSS0042554 Camellia sinensis var. sinensis HOM05D002691 ORTHO05D003304 1.9e-07 59.7 78 46.2
CAN.G85.27 Capsicum annuum HOM05D002691 ORTHO05D003304 1.9e-07 59.7 44 59.1
CiPaw.11G206700 Carya illinoinensis HOM05D002691 ORTHO05D003304 1.9e-07 59.7 44 63.6
Haze_09862 Corylus avellana HOM05D002691 ORTHO05D003304 1.9e-07 59.7 78 47.4
CsaV3_7G023860 Cucumis sativus L. HOM05D002691 ORTHO05D003304 1.9e-07 59.7 44 61.4
HanXRQChr11g0334161 Helianthus annuus HOM05D002691 ORTHO05D003304 1.9e-07 59.7 78 44.9
Hund23086 Selenicereus undatus HOM05D002691 ORTHO05D003304 1.9e-07 59.7 44 61.4
Sc03g0011550 Simmondsia chinensis HOM05D002691 ORTHO05D003304 1.9e-07 59.7 44 63.6
TWI39G0844 Tripterygium wilfordii HOM05D002691 ORTHO05D003304 1.9e-07 59.7 44 65.9
TAR627G1201 Trochodendron aralioides HOM05D002691 ORTHO05D003304 1.9e-07 59.7 78 47.4
MSTRG.14502 Avicennia marina HOM05D002691 ORTHO05D003304 2.5e-07 59.3 45 60.0
ECA247G2344 Erigeron canadensis HOM05D002691 ORTHO05D003304 2.5e-07 59.3 44 63.6
Nn1g07747 Nelumbo nucifera HOM05D002691 ORTHO05D003304 2.5e-07 59.3 44 68.2
Sed0017767 Sechium edule HOM05D002691 ORTHO05D003304 2.5e-07 59.3 44 61.4
CANSAT56G2557 Cannabis sativa HOM05D002691 ORTHO05D003304 3.2e-07 58.9 65 47.7
COL.COLO4_31950 Corchorus olitorius HOM05D002691 ORTHO05D003304 3.2e-07 58.9 65 49.2
Lj1A894T48 Lonicera japonica HOM05D002691 ORTHO05D003304 3.2e-07 58.9 78 44.9
MD05G1362500 Malus domestica HOM05D002691 ORTHO05D003304 3.2e-07 58.9 44 63.6
QL08p003188 Quercus lobata HOM05D002691 ORTHO05D003304 3.2e-07 58.9 44 68.2
ECA236G0238 Erigeron canadensis HOM05D002691 ORTHO05D003304 4.2e-07 58.5 44 63.6
Lj8A180G90 Lonicera japonica HOM05D002691 ORTHO05D003304 4.2e-07 58.5 44 59.1
QL05p066721 Quercus lobata HOM05D002691 ORTHO05D003304 4.2e-07 58.5 65 49.2
PGSC0003DMG400029788 Solanum tuberosum HOM05D002691 ORTHO05D003304 4.2e-07 58.5 44 59.1
Thecc.07G008100 Theobroma cacao HOM05D002691 ORTHO05D003304 4.2e-07 58.5 47 57.4
COL.COLO4_07739 Corchorus olitorius HOM05D002691 ORTHO05D003304 5.5e-07 58.2 44 59.1
Glyma.15G121400 Glycine max HOM05D002691 ORTHO05D003304 5.5e-07 58.2 44 63.6
Lsat_1_v5_gn_7_114941 Lactuca sativa HOM05D002691 ORTHO05D003304 5.5e-07 58.2 44 63.6
Potri.006G003400 Populus trichocarpa HOM05D002691 ORTHO05D003304 5.5e-07 58.2 65 47.7
MELO3C024967.2 Cucumis melo HOM05D002691 ORTHO05D003304 7.2e-07 57.8 44 59.1
Sed0008203 Sechium edule HOM05D002691 ORTHO05D003304 7.2e-07 57.8 44 65.9
Sopen12g007740 Solanum pennellii HOM05D002691 ORTHO05D003304 7.2e-07 57.8 44 56.8
PGSC0003DMG400014369 Solanum tuberosum HOM05D002691 ORTHO05D003304 7.2e-07 57.8 60 48.3
CiPaw.10G083100 Carya illinoinensis HOM05D002691 ORTHO05D003304 9.4e-07 57.4 44 63.6
HanXRQChr11g0334191 Helianthus annuus HOM05D002691 ORTHO05D003304 9.4e-07 57.4 44 61.4
PSO541G0817 Papaver somniferum HOM05D002691 ORTHO05D003304 9.4e-07 57.4 65 43.1
PSO675G4903 Papaver somniferum HOM05D002691 ORTHO05D003304 9.4e-07 57.4 65 43.1
TAR629G2924 Trochodendron aralioides HOM05D002691 ORTHO05D003304 9.4e-07 57.4 44 65.9
Lsat_1_v5_gn_5_2060 Lactuca sativa HOM05D002691 ORTHO05D003304 1.2e-06 57.0 65 44.6
RcHm_v2.0_Chr5g0000321 Rosa chinensis HOM05D002691 ORTHO05D003304 1.2e-06 57.0 44 63.6
ClCG01G011400 Citrullus lanatus HOM05D002691 ORTHO05D003304 1.6e-06 56.6 44 63.6
MELO3C024982.2 Cucumis melo HOM05D002691 ORTHO05D003304 1.6e-06 56.6 44 63.6
MD10G1340100 Malus domestica HOM05D002691 ORTHO05D003304 1.6e-06 56.6 44 61.4
Psat1g172160 Pisum sativum HOM05D002691 ORTHO05D003304 1.6e-06 56.6 48 58.3
Solyc12g015860.2 Solanum lycopersicum HOM05D002691 ORTHO05D003304 1.6e-06 56.6 44 56.8
Aqoxy7G03879 Aquilegia oxysepala HOM05D002691 ORTHO05D003304 2.1e-06 56.2 44 59.1
ECA236G1841 Erigeron canadensis HOM05D002691 ORTHO05D003304 2.1e-06 56.2 65 43.1
Migut.H01742 Erythranthe guttata HOM05D002691 ORTHO05D003304 2.1e-06 56.2 45 60.0
PSO210G0730 Papaver somniferum HOM05D002691 ORTHO05D003304 2.1e-06 56.2 44 59.1
FvH4_3g00240 Fragaria vesca HOM05D002691 ORTHO05D003304 2.7e-06 55.8 44 63.6
FAN21G1017 Fragaria x ananassa HOM05D002691 ORTHO05D003304 2.7e-06 55.8 44 63.6
FAN25G1507 Fragaria x ananassa HOM05D002691 ORTHO05D003304 2.7e-06 55.8 44 63.6
Lalb_Chr15g0088311 Lupinus albus HOM05D002691 ORTHO05D003304 2.7e-06 55.8 48 56.2
Sabra06G0003100 Salix brachista HOM05D002691 ORTHO05D003304 2.7e-06 55.8 44 63.6
Ah.09g233820 Amaranthus hybridus HOM05D002691 ORTHO05D003304 4.7e-06 55.1 59 50.8
Cpa.g.sc27.210 Carica papaya HOM05D002691 ORTHO05D003304 4.7e-06 55.1 45 60.0
Cfa021887 Carpinus fangiana HOM05D002691 ORTHO05D003304 4.7e-06 55.1 73 46.6
Glyma.09G015600 Glycine max HOM05D002691 ORTHO05D003304 4.7e-06 55.1 44 59.1
Gohir.A05G176600 Gossypium hirsutum HOM05D002691 ORTHO05D003304 4.7e-06 55.1 65 44.6
Gohir.D05G180000 Gossypium hirsutum HOM05D002691 ORTHO05D003304 4.7e-06 55.1 65 44.6
Gorai.009G184900 Gossypium raimondii HOM05D002691 ORTHO05D003304 4.7e-06 55.1 65 44.6
PSO210G3586 Papaver somniferum HOM05D002691 ORTHO05D003304 4.7e-06 55.1 44 56.8
CiPaw.09G110400 Carya illinoinensis HOM05D002691 ORTHO05D003304 6.1e-06 54.7 44 61.4
CsaV3_6G002810 Cucumis sativus L. HOM05D002691 ORTHO05D003304 6.1e-06 54.7 44 61.4
Nn1g07574 Nelumbo nucifera HOM05D002691 ORTHO05D003304 6.1e-06 54.7 65 49.2
TPR.G17552 Trifolium pratense HOM05D002691 ORTHO05D003304 6.1e-06 54.7 65 44.6
Aqoxy6G01227 Aquilegia oxysepala HOM05D002691 ORTHO05D003304 8.0e-06 54.3 44 61.4
CARHR223760 Cardamine hirsuta HOM05D002691 ORTHO05D003304 8.0e-06 54.3 44 59.1
Ca_00772_v3 Cicer arietinum L. HOM05D002691 ORTHO05D003304 8.0e-06 54.3 65 44.6
Manes.08G076550 Manihot esculenta HOM05D002691 ORTHO05D003304 8.0e-06 54.3 65 46.2
PGR042G2996 Punica granatum HOM05D002691 ORTHO05D003304 8.0e-06 54.3 44 56.8
Solyc10g005840.4 Solanum lycopersicum HOM05D002691 ORTHO05D003304 8.0e-06 54.3 45 57.8
Sopen10g001800 Solanum pennellii HOM05D002691 ORTHO05D003304 8.0e-06 54.3 45 57.8


User provided reference genes

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