Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 3.9e-92 341.7 201 100.0
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.9e-92 341.7 201 100.0
FAN26G2532 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.0e-76 290.4 201 87.6
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 7.2e-70 267.7 201 83.6
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.4e-44 183.7 144 85.4
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 2.5e-22 109.8 200 48.0
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 3.6e-21 105.9 174 49.4
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.1e-20 104.4 168 39.9
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 6.9e-20 101.7 123 55.3
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 2.4e-17 93.2 190 45.8
Peaxi162Scf00044g01721 Petunia axillaris HOM05D019315 ORTHO05D002375 4.6e-16 89.0 152 50.7
Prupe.6G194000 Prunus persica HOM05D004728 ORTHO05D002375 2.3e-15 86.7 165 47.9
Migut.H02321 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.9e-15 85.9 154 45.5
Oeu002157.4 Olea europaea HOM05D004728 ORTHO05D002375 3.3e-14 82.8 141 46.8
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 4.3e-14 82.4 157 46.5
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.6e-13 79.3 140 45.7
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.4e-12 77.4 134 47.0
SalBow3G1954 Salvia bowleyana HOM05D004728 ORTHO05D002375 1.4e-12 77.4 175 40.6
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 2.4e-12 76.6 133 45.9
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 5.3e-12 75.5 161 42.9
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 6.9e-12 75.1 152 35.5
TAR376G0441 Trochodendron aralioides HOM05D004728 ORTHO05D002375 6.9e-12 75.1 115 53.9
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 9.0e-12 74.7 140 44.3
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-11 74.3 203 34.5
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 2.0e-11 73.6 149 44.3
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 2.6e-11 73.2 124 30.6
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 3.4e-11 72.8 116 31.0
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 5.8e-11 72.0 123 46.3
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 9.9e-11 71.2 175 41.7
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 9.9e-11 71.2 124 32.3
Nitab4.5_0002996g0010 Nicotiana tabacum HOM05D019315 ORTHO05D002375 9.9e-11 71.2 167 40.1
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.3e-10 70.9 137 37.2
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 1.3e-10 70.9 124 41.1
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.3e-10 70.9 119 45.4
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.3e-10 70.9 127 46.5
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 1.3e-10 70.9 114 43.9
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 2.2e-10 70.1 150 45.3
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.2e-10 70.1 114 44.7
Oeu049688.1 Olea europaea HOM05D004728 ORTHO05D002375 2.2e-10 70.1 121 47.9
GSVIVG01003435001 Vitis vinifera HOM05D004728 ORTHO05D002375 2.9e-10 69.7 116 36.2
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 3.8e-10 69.3 122 44.3
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 4.9e-10 68.9 120 49.2
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 4.9e-10 68.9 121 47.9
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 4.9e-10 68.9 118 45.8
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 4.9e-10 68.9 104 51.9
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 6.4e-10 68.6 177 36.7
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 6.4e-10 68.6 118 47.5
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 8.4e-10 68.2 114 48.2
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 8.4e-10 68.2 103 40.8
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.9e-09 67.0 144 41.7
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.9e-09 67.0 120 42.5
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.9e-09 67.0 171 36.3
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-09 66.6 114 42.1
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-09 66.6 114 42.1
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 3.2e-09 66.2 112 31.2
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 3.2e-09 66.2 112 31.2
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.2e-09 65.9 114 41.2
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 4.2e-09 65.9 113 41.6
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 7.1e-09 65.1 120 46.7
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 9.3e-09 64.7 190 37.4
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 9.3e-09 64.7 114 43.9
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 9.3e-09 64.7 106 51.9
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.2e-08 64.3 125 43.2
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 2.1e-08 63.5 117 32.5
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 2.1e-08 63.5 187 36.9
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 4.6e-08 62.4 107 34.6
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 6.0e-08 62.0 116 46.6
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 6.0e-08 62.0 114 32.5
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 6.0e-08 62.0 103 34.0
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 7.9e-08 61.6 127 40.2
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 7.9e-08 61.6 100 48.0
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.0e-07 61.2 114 30.7
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 1.0e-07 61.2 114 42.1
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.0e-07 61.2 135 42.2
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.3e-07 60.8 136 44.1
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 1.3e-07 60.8 114 44.7
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.3e-07 60.8 118 44.9
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 1.3e-07 60.8 138 39.9
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 1.3e-07 60.8 141 27.7
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 1.3e-07 60.8 111 45.9
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 1.3e-07 60.8 114 44.7
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.8e-07 60.5 114 44.7
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 1.8e-07 60.5 112 38.4
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 1.8e-07 60.5 202 33.2
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 2.3e-07 60.1 123 39.8
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 3.9e-07 59.3 128 40.6
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 3.9e-07 59.3 106 48.1
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 5.1e-07 58.9 125 35.2
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 6.7e-07 58.5 106 47.2
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 6.7e-07 58.5 122 40.2
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 6.7e-07 58.5 93 51.6
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 8.7e-07 58.2 116 44.0
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 8.7e-07 58.2 123 40.7
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 8.7e-07 58.2 145 35.9
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 8.7e-07 58.2 144 27.1
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 1.1e-06 57.8 112 40.2
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 1.1e-06 57.8 139 28.1
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 1.1e-06 57.8 103 52.4
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 1.5e-06 57.4 121 38.0
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 1.5e-06 57.4 130 27.7
Hund23288 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.5e-06 57.4 122 42.6
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.9e-06 57.0 171 36.8
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.9e-06 57.0 151 39.1
Nitab4.5_0003374g0020 Nicotiana tabacum HOM05D012586 ORTHO05D012196 1.9e-06 57.0 117 47.0
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 1.9e-06 57.0 160 38.1
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 3.3e-06 56.2 117 38.5
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 3.3e-06 56.2 201 32.8
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 3.3e-06 56.2 130 36.9
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.3e-06 55.8 111 45.9
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 4.3e-06 55.8 137 36.5
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 5.6e-06 55.5 124 40.3
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 7.4e-06 55.1 108 41.7
Nitab4.5_0007336g0010 Nicotiana tabacum HOM05D012586 ORTHO05D012196 7.4e-06 55.1 117 47.0
Zm00001eb027840 Zea mays HOM05D007310 ORTHO05D002375 7.4e-06 55.1 173 33.5
Lsat_1_v5_gn_1_2800 Lactuca sativa HOM05D037404 ORTHO05D035140 9.6e-06 54.7 106 31.1
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 9.6e-06 54.7 98 42.9
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 9.6e-06 54.7 105 45.7


User provided reference genes

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