Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g20161 Fragaria vesca HOM05D003981 ORTHO05D003666 2.0e-280 968.4 472 100.0
FAN19G0280 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.9e-169 599.7 422 72.5
FvH4_5g31171 Fragaria vesca HOM05D003981 ORTHO05D003666 3.5e-99 366.3 456 49.1
FAN26G0569 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-94 350.5 364 55.8
FAN19G1135 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.9e-93 346.7 213 78.9
FAN18G3444 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-82 311.2 355 50.7
FAN19G2888 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.8e-37 160.2 116 71.6
RcHm_v2.0_Chr3g0449831 Rosa chinensis HOM05D003981 ORTHO05D003666 2.2e-29 134.4 409 29.3
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 3.2e-28 130.6 232 38.4
FAN25G0801 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.8e-26 124.8 233 36.9
FAN26G0221 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.7e-25 119.8 257 34.6
FvH4_4g34580 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-24 118.6 374 29.7
FvH4_6g14781 Fragaria vesca HOM05D003981 ORTHO05D003666 6.3e-24 116.3 226 35.4
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.3e-24 116.3 226 35.4
FAN17G1570 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.3e-24 116.3 227 38.3
Prupe.7G182200 Prunus persica HOM05D003981 ORTHO05D003666 8.3e-24 115.9 222 36.9
FAN07G0986 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.1e-23 114.0 227 37.9
FAN12G2446 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.1e-23 114.0 229 38.0
FAN12G3036 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.0e-23 112.8 229 38.0
FvH4_5g07470 Fragaria vesca HOM05D003981 ORTHO05D003666 9.1e-23 112.5 429 27.3
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 1.2e-22 112.1 414 26.8
FvH4_4g34520 Fragaria vesca HOM05D003981 ORTHO05D003666 1.6e-22 111.7 229 37.6
FAN05G2982 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-22 111.3 227 33.9
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 2.7e-22 110.9 227 37.9
FvH4_5g07510 Fragaria vesca HOM05D003981 ORTHO05D003666 4.5e-22 110.2 429 27.0
FvH4_5g08848 Fragaria vesca HOM05D003981 ORTHO05D003666 7.7e-22 109.4 225 34.2
FvH4_5g07350 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-21 108.6 427 26.9
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-21 108.6 244 37.3
FAN14G0912 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-21 108.2 226 33.6
FAN16G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.9e-21 107.5 281 31.0
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 2.9e-21 107.5 249 30.5
FvH4_3g40671 Fragaria vesca HOM05D003981 ORTHO05D003666 5.0e-21 106.7 281 31.0
FvH4_5g38320 Fragaria vesca HOM05D003981 ORTHO05D003666 5.0e-21 106.7 226 32.7
FAN09G1093 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-20 105.1 225 33.3
FAN09G1004 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-20 104.4 217 35.0
MD04G1179800 Malus domestica HOM05D003981 ORTHO05D003666 3.2e-20 104.0 266 33.1
MD12G1195500 Malus domestica HOM05D003981 ORTHO05D003666 3.2e-20 104.0 232 34.1
FAN18G1682 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.4e-20 102.4 222 33.8
MD12G1195600 Malus domestica HOM05D003981 ORTHO05D003666 1.6e-19 101.7 236 35.2
Prupe.2G096000 Prunus persica HOM05D003981 ORTHO05D003666 2.7e-19 100.9 237 33.3
FAN07G1958 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.0e-19 99.4 218 33.5
MD11G1006900 Malus domestica HOM05D003981 ORTHO05D003666 8.0e-19 99.4 225 32.4
FAN08G0796 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-18 99.0 216 33.3
RcHm_v2.0_Chr3g0460411 Rosa chinensis HOM05D003981 ORTHO05D003666 1.4e-18 98.6 234 33.8
FAN15G2324 Fragaria x ananassa HOM05D002345 ORTHO05D002391 1.8e-18 98.2 383 29.2
FAN06G2056 Fragaria x ananassa HOM05D001225 ORTHO05D001252 2.3e-18 97.8 458 25.5
FvH4_2g04190 Fragaria vesca HOM05D003981 ORTHO05D003666 5.2e-18 96.7 251 34.7
FAN18G2397 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.2e-18 96.7 229 33.2
FAN19G2785 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.2e-18 96.7 222 35.1
FAN24G2659 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.2e-18 96.7 251 34.7
FvH4_1g25190 Fragaria vesca HOM05D003981 ORTHO05D003666 8.8e-18 95.9 222 35.1
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.8e-18 95.9 253 32.0
RcHm_v2.0_Chr2g0085201 Rosa chinensis HOM05D003981 ORTHO05D003666 1.2e-17 95.5 177 37.3
FvH4_1g00691 Fragaria vesca HOM05D003981 ORTHO05D003666 2.0e-17 94.7 229 31.4
FAN20G0367 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-17 94.7 282 31.9
FvH4_6g09550 Fragaria vesca HOM05D003981 ORTHO05D003666 2.6e-17 94.4 291 28.9
RcHm_v2.0_Chr2g0164001 Rosa chinensis HOM05D003981 ORTHO05D003666 2.6e-17 94.4 401 25.7
FAN14G1975 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.4e-17 94.0 234 32.5
FAN18G0964 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.4e-17 94.0 235 31.9
FvH4_3g13181 Fragaria vesca HOM05D003981 ORTHO05D003666 4.4e-17 93.6 227 31.3
FvH4_6g03511 Fragaria vesca HOM05D003981 ORTHO05D003666 4.4e-17 93.6 160 33.8
RcHm_v2.0_Chr4g0428611 Rosa chinensis HOM05D003981 ORTHO05D003666 4.4e-17 93.6 232 33.6
FvH4_6g09801 Fragaria vesca HOM05D003981 ORTHO05D003666 5.7e-17 93.2 225 33.3
FvH4_6g09911 Fragaria vesca HOM05D003981 ORTHO05D003666 5.7e-17 93.2 186 36.0
FAN15G1118 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.5e-17 92.8 215 32.6
TWI59G1434 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 7.5e-17 92.8 224 30.4
FAN02G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.7e-16 90.5 364 26.9
FvH4_2g25871 Fragaria vesca HOM05D003981 ORTHO05D003666 6.3e-16 89.7 218 34.9
FvH4_2g20921 Fragaria vesca HOM05D003981 ORTHO05D003666 8.3e-16 89.4 248 32.7
FvH4_6g47440 Fragaria vesca HOM05D003981 ORTHO05D003666 8.3e-16 89.4 364 26.6
FAN02G2482 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.3e-16 89.4 335 29.0
Prupe.2G095900 Prunus persica HOM05D003981 ORTHO05D003666 8.3e-16 89.4 239 33.1
FvH4_6g45801 Fragaria vesca HOM05D003981 ORTHO05D003666 1.4e-15 88.6 225 31.1
FAN18G0802 Fragaria x ananassa HOM05D002662 ORTHO05D003666 1.8e-15 88.2 217 31.3
FAN09G0546 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-15 87.8 225 31.1
FAN28G1753 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-15 87.8 233 31.8
FAN17G3075 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.0e-15 86.3 242 28.9
FvH4_1g00812 Fragaria vesca HOM05D003981 ORTHO05D003666 9.1e-15 85.9 228 33.8
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 2.7e-14 84.3 159 34.6
FAN03G0829 Fragaria x ananassa HOM05D001225 ORTHO05D001252 3.5e-14 84.0 243 31.7
FAN08G0629 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.5e-14 83.6 336 27.7
FAN08G1984 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.5e-14 83.6 232 31.9
FAN10G2747 Fragaria x ananassa HOM05D001225 ORTHO05D001252 4.5e-14 83.6 229 33.2
FAN27G2648 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-13 82.4 191 35.1
FvH4_3g19662 Fragaria vesca HOM05D003981 ORTHO05D003666 3.8e-13 80.5 53 71.7
FAN11G0099 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.0e-13 80.1 182 32.4
FAN13G0559 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.0e-13 80.1 280 30.4
TAR624G0631 Trochodendron aralioides HOM05D000007 ORTHO05D003666 1.1e-12 79.0 230 25.2
FAN19G2493 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.3e-12 77.4 173 34.1
TWI59G0188 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 4.2e-12 77.0 211 30.8
FvH4_3g01041 Fragaria vesca HOM05D003981 ORTHO05D003666 9.5e-12 75.9 181 30.9
FAN09G1373 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.5e-12 75.9 228 31.1
FAN11G1242 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.5e-12 75.9 258 27.5
FAN05G1092 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-11 75.1 305 26.9
FAN14G5028 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-11 75.1 305 26.9
FvH4_1g00570 Fragaria vesca HOM05D003981 ORTHO05D003666 3.6e-11 73.9 292 27.7
FAN14G1640 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.1e-11 73.2 143 33.6
FAN09G0012 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-10 72.4 271 27.7
CiPaw.14G115500 Carya illinoinensis HOM05D000007 ORTHO05D003666 1.4e-10 72.0 233 27.9
FAN01G2610 Fragaria x ananassa HOM05D001225 ORTHO05D001252 2.3e-10 71.2 175 34.9
C05p44910 Brassica napus HOM05D000171 ORTHO05D000101 8.9e-10 69.3 204 26.5
BolC5t33215H Brassica oleracea HOM05D000171 ORTHO05D000101 8.9e-10 69.3 204 26.5
FAN18G2469 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.9e-10 69.3 234 29.1
Ciclev10030374m.g Citrus clementina HOM05D003981 ORTHO05D003666 1.2e-09 68.9 135 31.9
FAN05G1423 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-09 68.9 215 34.4
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.2e-09 68.9 133 34.6
TAR624G0698 Trochodendron aralioides HOM05D000007 ORTHO05D003666 1.5e-09 68.6 282 24.8
Aqoxy4G02034 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 2.0e-09 68.2 229 30.1
FAN04G1299 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-09 68.2 108 38.0
Atru.chr5.2443 Acer truncatum HOM05D003981 ORTHO05D003666 3.4e-09 67.4 360 25.0
Atru.chr9.1609 Acer truncatum HOM05D003981 ORTHO05D003666 4.4e-09 67.0 137 33.6
Haze_23197 Corylus avellana HOM05D000007 ORTHO05D003666 5.7e-09 66.6 124 34.7
Rhsim07G0064500 Rhododendron simsii HOM05D000007 ORTHO05D000521 7.5e-09 66.2 149 29.5
Aqoxy7G02775 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 9.8e-09 65.9 191 28.8
Migut.C01214 Erythranthe guttata HOM05D000007 ORTHO05D000521 1.3e-08 65.5 114 33.3
FAN14G1511 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-08 65.5 132 37.9
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 2.2e-08 64.7 112 36.6
TWI59G0221 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 3.7e-08 63.9 237 24.1
Aqoxy4G02035 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 4.9e-08 63.5 124 34.7
Rhsim07G0064200 Rhododendron simsii HOM05D000007 ORTHO05D000521 4.9e-08 63.5 122 32.0
Actinidia38708 Actinidia chinensis HOM05D000007 ORTHO05D013648 6.3e-08 63.2 206 27.2
Ah.15g098430 Amaranthus hybridus HOM05D000007 ORTHO05D000039 6.3e-08 63.2 294 23.1
FvH4_6g47480 Fragaria vesca HOM05D003981 ORTHO05D003666 8.3e-08 62.8 132 36.4
Thecc.01G185200 Theobroma cacao HOM05D000007 ORTHO05D000521 1.4e-07 62.0 119 27.7
Cfa010369 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.8e-07 61.6 127 30.7
Haze_23198 Corylus avellana HOM05D000007 ORTHO05D003666 1.8e-07 61.6 230 27.4
Medtr4g116320 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-07 61.6 278 23.0
FAN13G2481 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.2e-07 60.8 240 30.4
SalBow7G3915 Salvia bowleyana HOM05D000007 ORTHO05D000521 5.4e-07 60.1 131 28.2
Prupe.3G204700 Prunus persica HOM05D000007 ORTHO05D000521 7.0e-07 59.7 189 24.9
Duzib211G0499 Durio zibethinus HOM05D000007 ORTHO05D000521 9.2e-07 59.3 115 27.8
Gohir.A11G150700 Gossypium hirsutum HOM05D000007 ORTHO05D000521 9.2e-07 59.3 134 26.9
FAN01G0498 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.0e-06 58.2 239 24.3
SalBow1G6928 Salvia bowleyana HOM05D000007 ORTHO05D000039 2.7e-06 57.8 185 29.2
FAN23G0182 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.5e-06 57.4 227 27.3
FAN23G0731 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.5e-06 57.4 227 27.3
FAN23G1358 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.5e-06 57.4 227 27.3
MD13G1177900 Malus domestica HOM05D000007 ORTHO05D000521 4.5e-06 57.0 160 27.5
Gohir.D11G157200 Gossypium hirsutum HOM05D000007 ORTHO05D000521 7.8e-06 56.2 134 26.1
Gorai.007G167700 Gossypium raimondii HOM05D000007 ORTHO05D000521 7.8e-06 56.2 134 26.1
Nitab4.5_0013904g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.8e-06 56.2 212 24.5


User provided reference genes

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