Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 2.4e-104 382.5 240 100.0
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.7e-102 376.3 240 99.6
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.2e-95 353.6 197 95.9
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.8e-92 342.4 197 93.9
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 9.2e-80 300.8 196 83.2
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 6.0e-55 218.4 208 61.5
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 1.7e-49 200.3 207 56.5
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 1.9e-48 196.8 153 68.6
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 2.7e-47 193.0 206 57.3
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 3.5e-47 192.6 205 55.6
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 4.6e-47 192.2 210 55.2
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 4.6e-47 192.2 210 55.2
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 4.6e-47 192.2 205 55.1
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 1.0e-46 191.0 222 54.5
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.3e-46 190.7 212 54.7
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 1.3e-46 190.7 200 58.0
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 1.8e-46 190.3 204 56.9
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 3.9e-46 189.1 207 57.0
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 5.1e-46 188.7 210 55.7
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 6.7e-46 188.3 205 54.6
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 6.7e-46 188.3 202 55.0
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 8.7e-46 188.0 212 53.3
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 8.7e-46 188.0 203 55.2
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 1.1e-45 187.6 200 56.5
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 1.1e-45 187.6 203 58.6
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.1e-45 187.6 200 56.5
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 2.5e-45 186.4 205 57.6
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 4.3e-45 185.7 199 57.8
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 5.6e-45 185.3 200 56.5
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 7.4e-45 184.9 214 55.1
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 7.4e-45 184.9 206 55.8
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 1.6e-44 183.7 205 55.1
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 2.1e-44 183.3 206 55.8
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 4.8e-44 182.2 203 54.7
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.8e-43 180.3 197 55.8
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 1.8e-43 180.3 200 55.5
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 1.8e-43 180.3 204 52.0
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 2.4e-43 179.9 225 51.6
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 3.1e-43 179.5 207 53.6
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 4.0e-43 179.1 208 53.8
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 4.0e-43 179.1 203 53.7
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 5.3e-43 178.7 205 54.6
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 6.9e-43 178.3 195 57.4
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 1.2e-42 177.6 217 52.5
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 1.2e-42 177.6 229 50.2
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 1.5e-42 177.2 157 62.4
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 1.5e-42 177.2 208 53.8
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 2.0e-42 176.8 203 51.7
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 3.4e-42 176.0 197 54.8
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 5.8e-42 175.3 184 56.0
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 7.6e-42 174.9 222 49.5
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 9.9e-42 174.5 211 51.7
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 1.3e-41 174.1 198 55.6
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 1.7e-41 173.7 192 56.2
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 2.9e-41 172.9 211 53.1
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 2.9e-41 172.9 200 51.5
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 3.8e-41 172.6 206 51.9
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 6.4e-41 171.8 204 53.9
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 8.4e-41 171.4 210 51.4
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 8.4e-41 171.4 200 53.5
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 1.1e-40 171.0 204 51.5
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 3.2e-40 169.5 204 49.0
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 2.1e-39 166.8 143 64.3
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 7.9e-39 164.9 202 50.5
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 6.7e-38 161.8 201 54.2
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 1.1e-37 161.0 217 46.1
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 1.1e-37 161.0 203 49.3
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 2.5e-37 159.8 200 49.0
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 3.3e-37 159.5 217 47.5
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 4.3e-37 159.1 193 52.3
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 3.7e-36 156.0 236 44.9
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 1.1e-35 154.5 221 46.2
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 2.4e-35 153.3 210 48.6
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 2.2e-33 146.7 212 43.9
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 1.9e-32 143.7 303 39.3
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 3.2e-32 142.9 204 47.1
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 1.2e-31 141.0 199 44.2
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 3.5e-31 139.4 193 44.6
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 1.8e-30 137.1 111 64.9
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 2.3e-30 136.7 198 42.4
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 6.7e-30 135.2 198 43.9
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 1.1e-29 134.4 156 46.2
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 5.7e-29 132.1 188 47.9
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.7e-28 129.4 132 61.4
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 4.8e-28 129.0 205 44.9
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 3.1e-27 126.3 199 42.2
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 6.9e-27 125.2 199 39.7
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 6.9e-27 125.2 199 40.7
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 2.9e-25 119.8 202 40.1
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 6.5e-25 118.6 189 40.2
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 3.2e-24 116.3 190 40.0
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.2e-23 114.4 91 65.9
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 1.6e-23 114.0 148 50.7
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 3.6e-23 112.8 156 44.2
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 3.6e-23 112.8 156 44.2
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 1.5e-21 107.5 162 48.8
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 4.7e-15 85.9 181 38.1
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 3.9e-14 82.8 160 37.5
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 3.9e-14 82.8 69 59.4
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 5.7e-13 79.0 102 44.1
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 9.7e-13 78.2 180 35.6
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 1.1e-11 74.7 101 43.6
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 2.4e-11 73.6 133 44.4
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 3.4e-10 69.7 229 31.4
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 9.4e-08 61.6 53 60.4
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 2.1e-07 60.5 135 32.6


User provided reference genes

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