Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.3e-176 622.9 306 100.0
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.1e-175 619.8 306 99.3
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 3.7e-174 614.8 306 98.4
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.3e-173 610.9 322 94.7
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 6.1e-161 570.9 306 90.8
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.5e-159 566.2 306 90.2
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 1.1e-157 560.1 306 89.2
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.4e-156 555.1 276 98.6
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 8.5e-155 550.4 275 98.2
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 5.5e-154 547.7 306 85.0
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 3.6e-153 545.0 306 85.3
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 2.0e-151 539.3 306 84.6
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 4.8e-150 534.6 306 84.6
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 4.5e-148 528.1 307 82.7
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 7.7e-148 527.3 307 82.7
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 2.2e-147 525.8 306 81.7
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 5.0e-147 524.6 306 82.7
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 8.5e-147 523.9 307 81.8
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 1.1e-146 523.5 306 81.4
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.5e-146 523.1 306 81.4
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.5e-146 523.1 307 81.8
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 1.5e-146 523.1 306 81.7
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.5e-146 523.1 306 82.4
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.9e-146 522.7 307 81.8
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.9e-146 522.7 306 81.7
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 2.5e-146 522.3 306 81.4
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 3.2e-146 521.9 307 82.1
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 3.2e-146 521.9 307 80.8
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 4.2e-146 521.5 307 81.8
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 1.6e-145 519.6 306 81.4
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 2.1e-145 519.2 306 81.4
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 3.6e-145 518.5 307 80.8
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 8.0e-145 517.3 306 80.4
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.0e-144 516.9 307 81.1
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.0e-144 516.9 307 80.8
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.8e-144 516.2 307 81.1
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 82.1
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 6.7e-144 514.2 307 80.5
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 1.5e-143 513.1 306 80.4
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 2.0e-143 512.7 307 80.1
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 2.6e-143 512.3 307 81.1
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 2.6e-143 512.3 307 81.1
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 2.6e-143 512.3 307 78.5
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 3.3e-143 511.9 306 79.7
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 7.5e-143 510.8 307 79.2
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 1.7e-142 509.6 307 80.5
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 80.1
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 3.7e-142 508.4 307 78.8
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 6.3e-142 507.7 307 78.2
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 6.3e-142 507.7 307 80.1
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.8e-141 506.1 307 80.5
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 5.3e-141 504.6 390 66.7
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 3.5e-140 501.9 307 77.5
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 4.5e-140 501.5 307 76.9
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 1.7e-139 499.6 304 78.3
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 5.0e-139 498.0 307 76.5
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 1.9e-138 496.1 307 76.5
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 9.4e-138 493.8 307 76.2
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 1.4e-136 490.0 307 75.9
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.4e-136 490.0 307 75.6
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 4.0e-136 488.4 288 81.2
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.2e-135 486.9 307 76.2
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.1e-133 480.3 307 74.3
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 2.4e-133 479.2 358 67.9
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 5.4e-133 478.0 371 64.7
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 3.5e-132 475.3 307 73.0
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.0e-131 473.8 305 77.0
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 2.5e-130 469.2 370 65.1
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 3.3e-130 468.8 306 72.5
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 7.2e-130 467.6 306 71.6
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 2.8e-129 465.7 307 71.7
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 8.0e-129 464.2 292 78.8
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.8e-128 463.0 307 71.0
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 3.4e-127 458.8 307 71.0
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 3.3e-122 442.2 285 74.7
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 1.6e-121 439.9 307 71.3
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 6.1e-121 438.0 293 74.4
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 4.0e-120 435.3 307 69.1
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 8.3e-118 427.6 278 73.4
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.7e-116 422.5 277 72.9
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 4.7e-113 411.8 243 81.1
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 7.5e-111 404.4 312 62.8
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 2.4e-109 399.4 312 62.5
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 7.0e-109 397.9 235 81.7
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 3.1e-104 382.5 307 64.5
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.3e-102 377.1 306 58.5
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 1.5e-98 363.6 273 63.0
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.6e-97 360.1 236 72.5
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 5.4e-77 292.0 315 47.3
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 7.4e-74 281.6 243 59.7
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 6.2e-73 278.5 185 70.3
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 1.4e-61 240.7 134 83.6
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 4.1e-56 222.6 310 41.3
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 5.9e-55 218.8 565 29.4
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 5.9e-55 218.8 281 43.1
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.9e-54 216.5 170 67.6
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 5.1e-51 205.7 148 67.6
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.7e-23 113.6 88 67.0
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 5.0e-22 109.4 70 67.1
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.2e-20 104.8 225 31.6
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 1.6e-20 104.4 96 51.0
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.4e-19 101.3 72 68.1
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 3.7e-09 66.6 39 79.5
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 2.0e-07 60.8 34 82.4


User provided reference genes

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