Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g15930 Fragaria vesca HOM05D000135 ORTHO05D000203 2.0e-31 139.8 75 100.0
FAN19G0794 Fragaria x ananassa HOM05D000135 ORTHO05D000203 5.9e-31 138.3 75 98.7
FAN26G2503 Fragaria x ananassa HOM05D000955 ORTHO05D003340 3.8e-30 135.6 75 97.3
MD02G1171100 Malus domestica HOM05D000135 ORTHO05D000203 1.0e-19 100.9 74 71.6
MD15G1282600 Malus domestica HOM05D000135 ORTHO05D000203 3.4e-15 85.9 78 62.8
FAN23G1378 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.0e-14 84.3 42 97.6
Thecc.01G054700 Theobroma cacao HOM05D000135 ORTHO05D000203 1.9e-13 80.1 74 64.9
Gohir.D11G198300 Gossypium hirsutum HOM05D000135 ORTHO05D000203 2.5e-13 79.7 74 62.2
Gorai.007G212400 Gossypium raimondii HOM05D000135 ORTHO05D000203 2.5e-13 79.7 74 62.2
RcHm_v2.0_Chr2g0105321 Rosa chinensis HOM05D000135 ORTHO05D000203 3.2e-13 79.3 53 86.8
COL.COLO4_11402 Corchorus olitorius HOM05D000135 ORTHO05D000203 7.2e-13 78.2 74 60.8
Gohir.A11G191800 Gossypium hirsutum HOM05D000135 ORTHO05D000203 9.4e-13 77.8 74 59.5
Atru.chr3.341 Acer truncatum HOM05D000135 ORTHO05D000203 2.7e-12 76.3 82 57.3
Gohir.D03G021400 Gossypium hirsutum HOM05D000135 ORTHO05D000203 6.1e-12 75.1 72 54.2
Gorai.003G023100 Gossypium raimondii HOM05D000135 ORTHO05D000203 6.1e-12 75.1 72 54.2
Duzib147G1692 Durio zibethinus HOM05D000135 ORTHO05D000203 1.0e-11 74.3 75 57.3
QL06p041758 Quercus lobata HOM05D000135 ORTHO05D000203 2.3e-11 73.2 76 59.2
Duzib187G0789 Durio zibethinus HOM05D000135 ORTHO05D000203 8.8e-11 71.2 69 62.3
arahy.Tifrunner.gnm1.ann1.77Y3FG Arachis hypogaea HOM05D000135 ORTHO05D000203 3.3e-10 69.3 63 54.0
Ca_24776_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 9.7e-10 67.8 68 51.5
CANSAT01G1352 Cannabis sativa HOM05D000135 ORTHO05D000203 1.3e-09 67.4 61 55.7
Haze_15414 Corylus avellana HOM05D000135 ORTHO05D000203 1.3e-09 67.4 55 61.8
Potri.007G042900 Populus trichocarpa HOM05D000135 ORTHO05D000203 1.7e-09 67.0 70 51.4
Prupe.7G134500 Prunus persica HOM05D000135 ORTHO05D000203 2.2e-09 66.6 52 76.9
arahy.Tifrunner.gnm1.ann1.D3D30P Arachis hypogaea HOM05D000135 ORTHO05D000203 3.7e-09 65.9 63 52.4
Cfa004010 Carpinus fangiana HOM05D000135 ORTHO05D000203 4.8e-09 65.5 60 56.7
Sabra07G0038000 Salix brachista HOM05D000135 ORTHO05D000203 4.8e-09 65.5 70 50.0
TPR.G21277 Trifolium pratense HOM05D000135 ORTHO05D000203 1.1e-08 64.3 72 50.0
TWI53G1405 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 2.4e-08 63.2 69 50.7
Manes.13G127700 Manihot esculenta HOM05D000135 ORTHO05D000203 3.1e-08 62.8 59 57.6
Sc18g0004060 Simmondsia chinensis HOM05D000135 ORTHO05D000203 3.1e-08 62.8 69 53.6
Aqoxy5G01242 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 4.1e-08 62.4 72 51.4
Medtr5g017550 Medicago truncatula HOM05D000135 ORTHO05D000203 4.1e-08 62.4 72 45.8
Glyma.11G056500 Glycine max HOM05D000135 ORTHO05D000203 7.0e-08 61.6 72 45.8
Lalb_Chr16g0378511 Lupinus albus HOM05D000135 ORTHO05D000203 7.0e-08 61.6 48 60.4
TAR628G0143 Trochodendron aralioides HOM05D000135 ORTHO05D000203 7.0e-08 61.6 63 54.0
TAR628G0636 Trochodendron aralioides HOM05D000135 ORTHO05D000203 7.0e-08 61.6 63 54.0
VMungo1215G0656 Vigna mungo HOM05D000135 ORTHO05D000203 9.1e-08 61.2 72 50.0
Glyma.01G185600 Glycine max HOM05D000135 ORTHO05D000203 1.2e-07 60.8 72 47.2
Phvul.002G019300 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 1.6e-07 60.5 72 50.0
arahy.Tifrunner.gnm1.ann1.JMIG5W Arachis hypogaea HOM05D000135 ORTHO05D000203 2.0e-07 60.1 48 62.5
ClCG02G012820 Citrullus lanatus HOM05D000135 ORTHO05D000203 2.0e-07 60.1 76 46.1
MELO3C020900.2 Cucumis melo HOM05D000135 ORTHO05D000203 2.0e-07 60.1 61 54.1
Nitab4.5_0006001g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 2.6e-07 59.7 61 57.4
CsaV3_2G016890 Cucumis sativus L. HOM05D000135 ORTHO05D000203 3.5e-07 59.3 61 54.1
CANSAT25G3257 Cannabis sativa HOM05D000135 ORTHO05D000203 4.5e-07 58.9 74 48.6
Glyma.05G085200 Glycine max HOM05D000135 ORTHO05D000203 4.5e-07 58.9 59 52.5
Peaxi162Scf00917g00042 Petunia axillaris HOM05D000135 ORTHO05D000203 5.9e-07 58.5 63 54.0
CAN.G165.18 Capsicum annuum HOM05D000135 ORTHO05D000203 1.0e-06 57.8 51 56.9
CiPaw.05G006300 Carya illinoinensis HOM05D000135 ORTHO05D000203 1.0e-06 57.8 63 46.0
Ciclev10029994m.g Citrus clementina HOM05D000135 ORTHO05D000203 1.0e-06 57.8 74 51.4
Potri.009G102500 Populus trichocarpa HOM05D000135 ORTHO05D000203 1.3e-06 57.4 72 47.2
Solyc02g065000.1 Solanum lycopersicum HOM05D000135 ORTHO05D000203 1.3e-06 57.4 59 54.2
Medtr5g017510 Medicago truncatula HOM05D000135 ORTHO05D000203 1.7e-06 57.0 63 47.6
Medtr5g017560 Medicago truncatula HOM05D000135 ORTHO05D000203 1.7e-06 57.0 63 47.6
Psat2g166920 Pisum sativum HOM05D000135 ORTHO05D000203 1.7e-06 57.0 74 43.2
Sopen02g015130 Solanum pennellii HOM05D000135 ORTHO05D000203 1.7e-06 57.0 51 56.9
Hma1.2p1_0370F.1_g137840 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 2.2e-06 56.6 73 52.1
PGR042G1319 Punica granatum HOM05D000135 ORTHO05D000203 2.2e-06 56.6 74 47.3
TAR381G0503 Trochodendron aralioides HOM05D000135 ORTHO05D000203 2.9e-06 56.2 72 45.8
CSS0005567 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 3.8e-06 55.8 58 50.0
Sed0008130 Sechium edule HOM05D000135 ORTHO05D000203 5.0e-06 55.5 65 49.2
VMungo0251G3415 Vigna mungo HOM05D000135 ORTHO05D000203 5.0e-06 55.5 57 47.4
Atru.chr5.2711 Acer truncatum HOM05D000135 ORTHO05D000203 6.5e-06 55.1 60 50.0
Actinidia36498 Actinidia chinensis HOM05D000135 ORTHO05D000203 6.5e-06 55.1 70 48.6
Dinv39860 Davidia involucrata HOM05D000135 ORTHO05D000203 6.5e-06 55.1 69 52.2
Phvul.003G244275 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 6.5e-06 55.1 61 50.8
PGSC0003DMG400039532 Solanum tuberosum HOM05D000135 ORTHO05D000203 8.5e-06 54.7 51 54.9


User provided reference genes

Program Settings