Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g15570 Fragaria vesca HOM05D008552 ORTHO05D010745 5.9e-178 627.5 330 100.0
FAN19G2593 Fragaria x ananassa HOM05D008552 ORTHO05D010745 2.9e-177 625.2 330 99.7
FAN28G1904 Fragaria x ananassa HOM05D008552 ORTHO05D010745 2.5e-168 595.5 335 94.9
FAN23G0622 Fragaria x ananassa HOM05D008552 ORTHO05D010745 2.7e-167 592.0 338 93.8
FAN26G2968 Fragaria x ananassa HOM05D008552 ORTHO05D010745 5.2e-166 587.8 338 94.1
Prupe.7G137300 Prunus persica HOM05D008552 ORTHO05D010745 7.0e-70 268.5 323 49.5
Potri.005G135700 Populus trichocarpa HOM05D008552 ORTHO05D010745 1.4e-49 201.1 330 41.8
Cc11_g02380 Coffea canephora HOM05D008552 ORTHO05D010745 1.8e-46 190.7 238 46.6
Actinidia12231 Actinidia chinensis HOM05D008552 ORTHO05D010745 3.1e-46 189.9 297 40.1
Thecc.01G051600 Theobroma cacao HOM05D008552 ORTHO05D010745 9.5e-43 178.3 253 42.3
COL.COLO4_11369 Corchorus olitorius HOM05D008552 ORTHO05D010745 2.8e-42 176.8 269 40.5
MBI06_g07361_MAGBIO Magnolia biondii HOM05D008552 ORTHO05D010745 1.4e-41 174.5 309 38.2
Lj4g0011398 Lotus japonicus HOM05D008552 ORTHO05D010745 8.9e-41 171.8 225 44.0
Manes.13G125700 Manihot esculenta HOM05D008552 ORTHO05D010745 5.7e-40 169.1 293 38.2
Ca_22194_v3 Cicer arietinum L. HOM05D008552 ORTHO05D010745 2.2e-39 167.2 211 44.5
Psat0s3507g0040 Pisum sativum HOM05D008552 ORTHO05D010745 4.9e-39 166.0 211 43.6
ECA246G1147 Erigeron canadensis HOM05D008552 ORTHO05D010745 1.1e-38 164.9 297 39.4
Hma1.2p1_0047F.1_g027720 Hydrangea macrophylla HOM05D008552 ORTHO05D010745 1.1e-38 164.9 257 39.7
TPR.G19004 Trifolium pratense HOM05D008552 ORTHO05D010745 1.4e-38 164.5 212 43.9
Lsat_1_v5_gn_3_91661 Lactuca sativa HOM05D008552 ORTHO05D010745 4.6e-37 159.5 296 35.8
VMungo0251G1275 Vigna mungo HOM05D008552 ORTHO05D010745 1.0e-36 158.3 261 39.8
Phvul.003G246300 Phaseolus vulgaris HOM05D008552 ORTHO05D010745 2.9e-36 156.8 246 39.8
PGR102G2623 Punica granatum HOM05D008552 ORTHO05D010745 3.9e-36 156.4 305 37.0
Atru.chr3.410 Acer truncatum HOM05D008552 ORTHO05D010745 1.2e-34 151.4 333 36.6
DCAR_010919 Daucus carota HOM05D008552 ORTHO05D010745 4.7e-34 149.4 212 38.7
HanXRQChr12g0379281 Helianthus annuus HOM05D008552 ORTHO05D010745 6.8e-33 145.6 299 34.8
Actinidia16511 Actinidia chinensis HOM05D008552 ORTHO05D010745 8.9e-33 145.2 274 37.2
Gorai.008G074000 Gossypium raimondii HOM05D008552 ORTHO05D010745 9.8e-32 141.7 279 38.0
Aqoxy5G01300 Aquilegia oxysepala HOM05D008552 ORTHO05D010745 1.3e-31 141.4 299 34.4
Gohir.D12G089000 Gossypium hirsutum HOM05D008552 ORTHO05D010745 2.9e-31 140.2 332 34.6
Manes.13G125400 Manihot esculenta HOM05D008552 ORTHO05D010745 6.4e-31 139.0 261 36.4
Gohir.A12G082600 Gossypium hirsutum HOM05D008552 ORTHO05D010745 2.4e-30 137.1 279 37.3
DCAR_010918 Daucus carota HOM05D008552 ORTHO05D010745 5.4e-30 136.0 213 39.0
DCAR_025711 Daucus carota HOM05D000369 ORTHO05D000253 7.0e-30 135.6 294 33.3
Oeu050753.1 Olea europaea HOM05D008552 ORTHO05D010745 1.2e-29 134.8 241 36.5
Medtr8g079700 Medicago truncatula HOM05D008552 ORTHO05D010745 4.3e-27 126.3 197 39.6
Migut.H00461 Erythranthe guttata HOM05D008552 ORTHO05D010745 2.8e-26 123.6 227 34.4
Dinv36925 Davidia involucrata HOM05D008552 ORTHO05D010745 1.4e-25 121.3 133 51.1
Haze_15435 Corylus avellana HOM05D008552 ORTHO05D010745 1.3e-23 114.8 264 32.2
Cpa.g.sc6.385 Carica papaya HOM05D008552 ORTHO05D010745 2.9e-23 113.6 259 33.6
Cfa003989 Carpinus fangiana HOM05D008552 ORTHO05D010745 1.2e-21 108.2 266 32.3
CiPaw.01G022400 Carya illinoinensis HOM05D008552 ORTHO05D010745 1.6e-21 107.8 321 31.5
Dinv39883 Davidia involucrata HOM05D008552 ORTHO05D010745 2.1e-18 97.4 239 33.1
Eucgr.H01996 Eucalyptus grandis HOM05D008552 ORTHO05D010745 4.7e-18 96.3 283 30.7
Dinv29960 Davidia involucrata HOM05D008552 ORTHO05D010745 1.1e-17 95.1 129 45.7
Glyma.05G080700 Glycine max HOM05D008552 ORTHO05D010745 4.0e-17 93.2 288 27.1
Dinv24942 Davidia involucrata HOM05D008552 ORTHO05D000073 1.2e-16 91.7 120 42.5
QL03p002405 Quercus lobata HOM05D008552 ORTHO05D010745 1.5e-16 91.3 269 29.4
Ciclev10027149m.g Citrus clementina HOM05D008552 ORTHO05D010745 3.5e-13 80.1 241 31.5
arahy.Tifrunner.gnm1.ann1.A84CEX Arachis hypogaea HOM05D008552 ORTHO05D010745 1.9e-11 74.3 209 31.6


User provided reference genes

Program Settings