Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g15070 Fragaria vesca HOM05D067799 ORTHO05D045685 3.8e-102 374.8 182 100.0
FAN19G2363 Fragaria x ananassa HOM05D067799 ORTHO05D045685 6.8e-35 151.4 128 67.2
Atru.chr3.3019 Acer truncatum HOM05D000003 ORTHO05D000022 4.0e-11 72.4 68 44.1
Atru.chr1.1701 Acer truncatum HOM05D000003 ORTHO05D000022 5.3e-11 72.0 64 50.0
Atru.chr8.30 Acer truncatum HOM05D000003 ORTHO05D000022 6.9e-11 71.6 65 44.6
Atru.chr1.2517 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-10 70.9 62 51.6
Atru.chr2.1762 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-10 70.5 64 46.9
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-10 70.1 91 38.5
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-10 70.1 64 48.4
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-10 69.3 66 48.5
Atru.chr1.3262 Acer truncatum HOM05D000003 ORTHO05D000022 4.5e-10 68.9 64 43.8
Atru.chr2.2857 Acer truncatum HOM05D000003 ORTHO05D000022 4.5e-10 68.9 78 41.0
Atru.chr3.2099 Acer truncatum HOM05D000003 ORTHO05D000022 5.8e-10 68.6 64 45.3
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 9.9e-10 67.8 65 41.5
Atru.chr12.2455 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-09 66.6 70 41.4
Atru.chr8.699 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-09 66.6 68 42.6
Prupe.6G201000 Prunus persica HOM05D000003 ORTHO05D000022 2.9e-09 66.2 65 41.5
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 3.8e-09 65.9 69 36.2
Prupe.5G085900 Prunus persica HOM05D000003 ORTHO05D000022 3.8e-09 65.9 65 40.0
Atru.chr11.1243 Acer truncatum HOM05D000003 ORTHO05D000022 4.9e-09 65.5 80 41.2
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 4.9e-09 65.5 66 40.9
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 8.4e-09 64.7 64 43.8
Atru.chr6.589 Acer truncatum HOM05D000003 ORTHO05D000022 8.4e-09 64.7 66 36.4
Atru.chr9.518 Acer truncatum HOM05D000003 ORTHO05D000022 8.4e-09 64.7 64 43.8
Atru.chr12.663 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-08 64.3 64 46.9
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-08 63.9 65 41.5
Atru.chr4.458 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-08 63.9 64 43.8
Atru.chr6.1037 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-08 63.9 64 42.2
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 1.9e-08 63.5 64 42.2
Atru.chr3.1879 Acer truncatum HOM05D000003 ORTHO05D000022 3.2e-08 62.8 65 38.5
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 3.2e-08 62.8 55 52.7
Atru.chr5.1039 Acer truncatum HOM05D000003 ORTHO05D000022 4.2e-08 62.4 69 39.1
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-08 62.0 64 42.2
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-08 62.0 64 43.8
Atru.chr2.1642 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-08 62.0 64 35.9
Atru.chr2.284 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-08 62.0 71 38.0
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-08 62.0 66 43.9
Atru.chr8.2517 Acer truncatum HOM05D000003 ORTHO05D000022 7.1e-08 61.6 66 40.9
Atru.chr10.1106 Acer truncatum HOM05D000003 ORTHO05D000022 9.3e-08 61.2 87 33.3
Atru.chr6.2380 Acer truncatum HOM05D000003 ORTHO05D000022 9.3e-08 61.2 64 37.5
Atru.chr10.557 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-07 60.8 64 37.5
Atru.chr12.385 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-07 60.8 64 37.5
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-07 60.8 55 43.6
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 1.2e-07 60.8 66 39.4
Atru.chr12.1173 Acer truncatum HOM05D000003 ORTHO05D000022 2.1e-07 60.1 66 42.4
Atru.chr13.2391 Acer truncatum HOM05D000003 ORTHO05D000022 2.1e-07 60.1 85 35.3
Atru.chr12.2484 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-07 59.7 69 34.8
Atru.chr3.1552 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-07 59.7 63 36.5
Atru.chr3.2744 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-07 59.7 68 35.3
Atru.chr5.1996 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-07 59.7 77 35.1
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 3.5e-07 59.3 64 35.9
Atru.chr10.1248 Acer truncatum HOM05D000003 ORTHO05D000022 3.5e-07 59.3 64 42.2
Atru.chr3.867 Acer truncatum HOM05D000003 ORTHO05D000022 3.5e-07 59.3 66 45.5
Atru.chr1.276 Acer truncatum HOM05D000003 ORTHO05D000022 4.6e-07 58.9 69 34.8
FvH4_7g26563 Fragaria vesca HOM05D000003 ORTHO05D000022 4.6e-07 58.9 65 41.5
Atru.chr2.3435 Acer truncatum HOM05D000003 ORTHO05D000022 6.0e-07 58.5 70 40.0
Atru.chr4.827 Acer truncatum HOM05D000003 ORTHO05D000022 6.0e-07 58.5 88 33.0
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-07 58.5 64 39.1
Atru.chr12.1756 Acer truncatum HOM05D000003 ORTHO05D000022 7.9e-07 58.2 50 46.0
Atru.chr13.1938 Acer truncatum HOM05D000003 ORTHO05D000022 7.9e-07 58.2 66 37.9
Atru.chr5.2373 Acer truncatum HOM05D000003 ORTHO05D000022 7.9e-07 58.2 54 48.1
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.8 64 39.1
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.8 77 33.8
FvH4_2g15861 Fragaria vesca HOM05D000003 ORTHO05D000022 1.0e-06 57.8 64 42.2
Atru.chr1.1867 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 57.4 54 46.3
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 57.4 64 35.9
Atru.chr3.1505 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 57.4 64 39.1
Atru.chr7.170 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 57.4 68 39.7
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 1.8e-06 57.0 66 37.9
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 57.0 64 39.1
RcHm_v2.0_Chr7g0181271 Rosa chinensis HOM05D000003 ORTHO05D000022 1.8e-06 57.0 64 40.6
Atru.chr2.2394 Acer truncatum HOM05D000003 ORTHO05D000022 2.3e-06 56.6 64 37.5
Atru.chr3.2200 Acer truncatum HOM05D000003 ORTHO05D000022 3.0e-06 56.2 64 37.5
Atru.chr9.658 Acer truncatum HOM05D000003 ORTHO05D000022 3.0e-06 56.2 70 40.0
Atru.chr5.1023 Acer truncatum HOM05D000003 ORTHO05D000022 5.1e-06 55.5 65 33.8
Atru.chr5.1030 Acer truncatum HOM05D000003 ORTHO05D000022 5.1e-06 55.5 65 33.8
Atru.chr1.1754 Acer truncatum HOM05D000003 ORTHO05D000022 6.7e-06 55.1 64 39.1
Atru.chr10.713 Acer truncatum HOM05D000003 ORTHO05D000022 6.7e-06 55.1 64 34.4
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 6.7e-06 55.1 64 37.5
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 8.7e-06 54.7 64 37.5
Atru.chr7.259 Acer truncatum HOM05D000003 ORTHO05D000022 8.7e-06 54.7 85 29.4


User provided reference genes

Program Settings