Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g14282 Fragaria vesca HOM05D003486 ORTHO05D011329 7.1e-89 330.5 157 100.0
FAN26G1762 Fragaria x ananassa HOM05D003486 ORTHO05D021574 4.0e-15 85.5 102 48.0
TWI77G0748 Tripterygium wilfordii HOM05D003486 ORTHO05D011329 8.6e-10 67.8 84 40.5
Dinv15708 Davidia involucrata HOM05D003486 ORTHO05D004600 1.9e-09 66.6 84 38.1
Dinv21376 Davidia involucrata HOM05D003486 ORTHO05D004600 1.9e-09 66.6 84 38.1
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 3.6e-08 62.4 105 38.1
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 8.0e-08 61.2 105 35.2
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 1.4e-07 60.5 105 37.1
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 1.4e-07 60.5 105 37.1
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 1.4e-07 60.5 105 37.1
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 1.4e-07 60.5 105 37.1
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 1.4e-07 60.5 105 37.1
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 1.8e-07 60.1 105 35.2
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 2.3e-07 59.7 105 36.2
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 3.0e-07 59.3 87 37.9
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 4.0e-07 58.9 105 36.2
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 5.2e-07 58.5 105 37.1
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 6.8e-07 58.2 87 39.1
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 6.8e-07 58.2 103 35.0
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 6.8e-07 58.2 87 37.9
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 6.8e-07 58.2 87 35.6
Hma1.2p1_0847F.1_g227880 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 6.8e-07 58.2 105 33.3
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 6.8e-07 58.2 87 37.9
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 6.8e-07 58.2 95 35.8
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 8.9e-07 57.8 105 34.3
HPP92_023711 Vanilla planifolia HOM05D003486 ORTHO05D004600 8.9e-07 57.8 94 33.0
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 1.2e-06 57.4 105 35.2
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 1.2e-06 57.4 105 34.3
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 1.2e-06 57.4 87 37.9
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 1.2e-06 57.4 87 36.8
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 1.2e-06 57.4 87 36.8
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 1.2e-06 57.4 87 37.9
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 1.2e-06 57.4 87 37.9
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 1.5e-06 57.0 105 35.2
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 1.5e-06 57.0 87 36.8
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 1.5e-06 57.0 106 35.8
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 1.5e-06 57.0 106 34.9
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 1.5e-06 57.0 105 34.3
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 1.5e-06 57.0 106 36.8
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 2.0e-06 56.6 105 34.3
RcHm_v2.0_Chr2g0102541 Rosa chinensis HOM05D003486 ORTHO05D022430 2.0e-06 56.6 76 32.9
RcHm_v2.0_Chr2g0102571 Rosa chinensis HOM05D003486 ORTHO05D022430 2.0e-06 56.6 76 32.9
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 2.0e-06 56.6 105 34.3
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 2.6e-06 56.2 105 33.3
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 2.6e-06 56.2 105 33.3
GSVIVG01010758001 Vitis vinifera HOM05D003486 ORTHO05D004600 2.6e-06 56.2 105 32.4
Eucgr.A00277 Eucalyptus grandis HOM05D003486 ORTHO05D004600 3.4e-06 55.8 87 37.9
Thhalv10011249m.g Eutrema salsugineum HOM05D000684 ORTHO05D000688 3.4e-06 55.8 90 33.3
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 3.4e-06 55.8 87 34.5
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 3.4e-06 55.8 87 34.5
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 3.4e-06 55.8 87 36.8
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 3.4e-06 55.8 87 36.8
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 4.4e-06 55.5 105 35.2
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 4.4e-06 55.5 105 33.3
Haze_01509 Corylus avellana HOM05D003486 ORTHO05D004600 4.4e-06 55.5 87 37.9
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 4.4e-06 55.5 105 33.3
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 4.4e-06 55.5 105 33.3
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 4.4e-06 55.5 87 36.8
Nitab4.5_0001940g0040 Nicotiana tabacum HOM05D003486 ORTHO05D004600 4.4e-06 55.5 99 35.4
RcHm_v2.0_Chr2g0102471 Rosa chinensis HOM05D003486 ORTHO05D021574 4.4e-06 55.5 84 36.9
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 4.4e-06 55.5 105 34.3
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 4.4e-06 55.5 105 33.3
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 5.8e-06 55.1 87 36.8
ClCG08G004750 Citrullus lanatus HOM05D003486 ORTHO05D004600 7.5e-06 54.7 88 37.5
Potri.011G119500 Populus trichocarpa HOM05D000684 ORTHO05D000688 7.5e-06 54.7 117 29.1
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 7.5e-06 54.7 85 36.5
CAN.G336.6 Capsicum annuum HOM05D003486 ORTHO05D004600 9.8e-06 54.3 87 35.6
CiPaw.01G100100 Carya illinoinensis HOM05D003486 ORTHO05D004600 9.8e-06 54.3 87 34.5
Nitab4.5_0001263g0020 Nicotiana tabacum HOM05D003486 ORTHO05D004600 9.8e-06 54.3 99 35.4
Sabra08G0010300 Salix brachista HOM05D003486 ORTHO05D004600 9.8e-06 54.3 83 36.1
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 9.8e-06 54.3 105 35.2
TWI12G1029 Tripterygium wilfordii HOM05D003486 ORTHO05D011329 9.8e-06 54.3 85 34.1


User provided reference genes

Program Settings