Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g14191 Fragaria vesca HOM05D008040 ORTHO05D010075 2.1e-256 888.6 477 100.0
FAN19G2662 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.4e-164 583.6 455 73.6
RcHm_v2.0_Chr2g0102901 Rosa chinensis HOM05D008040 ORTHO05D010075 1.9e-121 440.3 355 67.3
FAN19G2417 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.8e-103 380.6 545 45.5
FvH4_1g14071 Fragaria vesca HOM05D008040 ORTHO05D010075 4.0e-103 379.4 545 45.5
FAN26G0836 Fragaria x ananassa HOM05D008040 ORTHO05D010075 4.5e-102 375.9 542 45.2
FAN23G2403 Fragaria x ananassa HOM05D008040 ORTHO05D010075 7.1e-100 368.6 520 46.2
RcHm_v2.0_Chr2g0102561 Rosa chinensis HOM05D008040 ORTHO05D010075 3.9e-98 362.8 350 55.4
FAN28G2855 Fragaria x ananassa HOM05D008040 ORTHO05D010075 6.1e-67 259.2 259 55.2
Prupe.7G151200 Prunus persica HOM05D008040 ORTHO05D010075 2.2e-48 197.6 348 38.5
MD12G1051600 Malus domestica HOM05D008040 ORTHO05D010075 1.9e-44 184.5 341 37.5
MD12G1211200 Malus domestica HOM05D008040 ORTHO05D010075 5.2e-42 176.4 342 37.1
MD15G1268400 Malus domestica HOM05D008040 ORTHO05D010075 2.3e-26 124.4 186 41.9
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 2.3e-26 124.4 174 42.0
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 4.1e-23 113.6 167 41.3
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 3.5e-22 110.5 167 40.1
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 3.0e-21 107.5 170 39.4
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 2.8e-19 100.9 183 36.6
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 8.1e-19 99.4 173 37.0
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 1.1e-18 99.0 332 28.6
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.1e-18 99.0 175 38.3
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 1.4e-18 98.6 334 29.0
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 1.4e-18 98.6 278 30.2
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.1e-18 97.4 180 36.7
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.2e-17 95.5 188 36.2
SGA_v2.0_scaffold147G36326 Striga asiatica HOM05D008040 ORTHO05D010075 2.0e-17 94.7 166 35.5
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.6e-17 94.4 363 26.7
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 5.8e-17 93.2 187 36.9
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 5.8e-17 93.2 187 36.9
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 5.8e-17 93.2 171 37.4
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.2e-16 91.3 171 37.4
Potri.013G110300 Populus trichocarpa HOM05D008040 ORTHO05D010075 6.4e-16 89.7 188 35.1
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 8.4e-16 89.4 171 36.3
Potri.013G109900 Populus trichocarpa HOM05D008040 ORTHO05D010075 8.4e-16 89.4 232 31.5
AUR62008579 Chenopodium quinoa HOM05D008040 ORTHO05D010075 1.1e-15 89.0 177 33.3
Ah.07g206250 Amaranthus hybridus HOM05D008040 ORTHO05D010075 1.9e-15 88.2 165 36.4
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 2.4e-15 87.8 193 35.2
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 2.7e-14 84.3 187 35.8
Sabra08G0010400 Salix brachista HOM05D008040 ORTHO05D010075 6.0e-14 83.2 119 43.7
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 7.8e-14 82.8 178 33.1
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.0e-13 82.4 171 35.1
Nitab4.5_0005142g0030 Nicotiana tabacum HOM05D008040 ORTHO05D010075 3.9e-13 80.5 212 33.0
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 1.1e-12 79.0 203 31.0
FAN28G1672 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.9e-12 78.2 256 31.2
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 1.9e-12 78.2 202 32.7
vmacro17324 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 4.3e-12 77.0 103 42.7
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 1.4e-10 72.0 166 31.3
Potri.008G016300 Populus trichocarpa HOM05D008040 ORTHO05D010075 1.4e-10 72.0 73 53.4
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 1.8e-10 71.6 169 32.0
Os01g0876300 Oryza sativa ssp. japonica HOM05D000664 ORTHO05D000491 2.4e-10 71.2 159 33.3
PSO339G3463 Papaver somniferum HOM05D008040 ORTHO05D010075 6.9e-10 69.7 170 31.8
Potri.008G016150 Populus trichocarpa HOM05D008040 ORTHO05D010075 1.5e-09 68.6 74 50.0
Ah.06g196070 Amaranthus hybridus HOM05D008040 ORTHO05D010075 4.4e-09 67.0 168 33.9
Oeu045297.1 Olea europaea HOM05D008040 ORTHO05D010075 7.6e-09 66.2 159 32.7
PSO761G0098 Papaver somniferum HOM05D008040 ORTHO05D010075 1.7e-08 65.1 189 31.2
Rhsim01G0013600 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.2e-08 64.7 113 35.4
Ciclev10026974m.g Citrus clementina HOM05D008040 ORTHO05D010075 3.8e-08 63.9 143 33.6
CSS0031414 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 6.4e-08 63.2 89 41.6
PGSC0003DMG400019443 Solanum tuberosum HOM05D002420 ORTHO05D002422 8.4e-08 62.8 177 28.8
Solyc05g051583.1 Solanum lycopersicum HOM05D000664 ORTHO05D000491 1.1e-07 62.4 139 32.4
PSO017G2897 Papaver somniferum HOM05D008040 ORTHO05D010075 1.9e-07 61.6 170 31.8
Rhsim03G0249000 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.2e-07 60.8 95 36.8
unitig_899.g14987 Utricularia gibba HOM05D002420 ORTHO05D002422 4.2e-07 60.5 189 27.0
PSO017G4273 Papaver somniferum HOM05D000789 ORTHO05D001155 5.4e-07 60.1 194 28.4
Rhsim03G0248800 Rhododendron simsii HOM05D000664 ORTHO05D000491 7.1e-07 59.7 90 36.7
Duzib205G1254 Durio zibethinus HOM05D000664 ORTHO05D000491 1.6e-06 58.5 149 32.2
RhsimUnG0091900 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.6e-06 58.5 163 31.3
Aqoxy6G00905 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 2.1e-06 58.2 181 29.3
FAN02G4514 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.7e-06 57.8 91 38.5
Rhsim01G0013700 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.5e-06 57.4 98 36.7
Os01g0379400 Oryza sativa ssp. japonica HOM05D000664 ORTHO05D000491 4.6e-06 57.0 184 30.4
Rhsim01G0013400 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.6e-06 57.0 119 32.8
Rhsim08G0168000 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.0e-06 56.6 99 37.4
FvH4_2g35920 Fragaria vesca HOM05D000664 ORTHO05D000491 7.8e-06 56.2 94 37.2
FvH4_2g35950 Fragaria vesca HOM05D000664 ORTHO05D000491 7.8e-06 56.2 148 30.4
Gorai.008G214400 Gossypium raimondii HOM05D000664 ORTHO05D000491 7.8e-06 56.2 153 27.5
Rhsim01G0013800 Rhododendron simsii HOM05D000664 ORTHO05D000491 7.8e-06 56.2 100 34.0


User provided reference genes

Program Settings