Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 2.7e-62 242.3 166 100.0
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.7e-62 242.3 166 100.0
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 6.6e-61 237.7 166 98.2
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 1.3e-53 213.4 166 93.4
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 5.6e-44 181.4 167 80.2
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 2.6e-41 172.6 167 79.0
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 5.4e-39 164.9 166 75.9
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 3.9e-37 158.7 166 76.5
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 2.5e-36 156.0 166 74.1
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 3.3e-36 155.6 166 74.1
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 7.4e-36 154.5 165 73.3
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 9.6e-36 154.1 166 74.1
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 1.3e-35 153.7 166 74.1
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 2.1e-35 152.9 166 72.9
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 3.7e-35 152.1 166 72.9
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 4.8e-35 151.8 166 72.9
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 4.8e-35 151.8 166 72.9
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 4.8e-35 151.8 169 72.8
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 6.2e-35 151.4 168 70.8
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.1e-34 150.6 166 72.9
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.8e-34 149.8 168 75.0
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 1.8e-34 149.8 166 73.5
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 3.1e-34 149.1 165 73.3
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 4.0e-34 148.7 167 71.9
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 1.2e-33 147.1 171 69.6
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 1.2e-33 147.1 166 71.7
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.3e-32 143.7 134 85.1
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 1.3e-32 143.7 130 87.7
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 1.3e-32 143.7 166 69.9
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.7e-32 143.3 166 71.7
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 1.7e-32 143.3 166 71.7
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 1.7e-32 143.3 166 70.5
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.7e-32 143.3 167 72.5
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 4.9e-32 141.7 166 70.5
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 4.9e-32 141.7 167 71.9
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 8.4e-32 141.0 166 71.1
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 1.1e-31 140.6 163 71.2
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 1.1e-31 140.6 165 70.3
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 1.9e-31 139.8 168 69.6
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 3.2e-31 139.0 168 69.6
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 3.2e-31 139.0 164 70.7
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 3.2e-31 139.0 167 70.1
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 7.1e-31 137.9 164 70.1
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 7.1e-31 137.9 166 72.3
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 9.3e-31 137.5 133 82.7
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 1.2e-30 137.1 167 68.3
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.2e-30 137.1 128 84.4
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 1.2e-30 137.1 135 78.5
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.6e-30 136.7 171 68.4
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 3.5e-30 135.6 114 88.6
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 3.5e-30 135.6 114 88.6
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 6.0e-30 134.8 133 80.5
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 7.9e-30 134.4 169 69.2
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 7.9e-30 134.4 170 68.8
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 2.3e-29 132.9 166 70.5
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 2.3e-29 132.9 166 69.9
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 2.3e-29 132.9 166 69.3
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 3.0e-29 132.5 166 70.5
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 3.0e-29 132.5 166 70.5
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 3.0e-29 132.5 168 70.2
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 3.0e-29 132.5 168 67.3
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 3.9e-29 132.1 147 74.1
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 6.7e-29 131.3 166 69.9
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.1e-28 130.6 166 69.9
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 1.5e-28 130.2 169 67.5
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 4.3e-28 128.6 166 68.7
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 4.3e-28 128.6 168 66.7
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 9.6e-28 127.5 166 66.9
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 9.6e-28 127.5 128 81.2
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 1.3e-27 127.1 123 85.4
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.6e-27 126.7 166 68.7
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 1.6e-27 126.7 128 64.8
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 1.6e-27 126.7 134 76.1
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 2.1e-27 126.3 170 67.1
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 2.8e-27 125.9 166 69.3
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 3.7e-27 125.6 166 68.7
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 6.2e-27 124.8 142 53.5
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 5.3e-26 121.7 166 66.9
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 4.5e-25 118.6 102 66.7
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 5.8e-25 118.2 145 73.1
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 7.6e-25 117.9 128 73.4
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 2.2e-24 116.3 163 67.5
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 2.9e-24 115.9 132 68.9
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 2.9e-24 115.9 145 70.3
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 1.4e-23 113.6 121 81.0
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.5e-23 112.8 102 63.7
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 9.3e-23 110.9 183 42.6
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 6.1e-22 108.2 113 81.4
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.3e-21 106.3 113 75.2
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 7.4e-20 101.3 166 58.4
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 1.6e-19 100.1 118 45.8
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 6.3e-19 98.2 102 59.8
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.1e-15 87.4 163 60.1
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.4e-15 87.0 162 57.4
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.5e-15 86.3 129 45.0
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 3.6e-14 82.4 128 64.8
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 7.9e-14 81.3 89 69.7
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 2.3e-13 79.7 114 66.7
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.8e-11 72.8 105 38.1
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 6.9e-10 68.2 59 57.6
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 1.5e-09 67.0 48 66.7
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 2.2e-08 63.2 162 51.9
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 4.7e-06 55.5 34 79.4


User provided reference genes

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