Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 1.1e-69 266.5 137 100.0
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.8e-67 259.2 137 97.8
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 6.2e-65 250.8 137 94.2
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.9e-60 233.8 137 89.1
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 1.8e-48 196.1 137 75.9
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.5e-31 139.8 68 100.0
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 1.1e-29 133.7 134 56.7
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 2.3e-27 125.9 130 53.8
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 3.0e-27 125.6 103 62.1
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 3.9e-27 125.2 132 56.8
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 6.7e-27 124.4 132 53.0
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 4.4e-26 121.7 131 53.4
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.4e-26 121.7 131 53.4
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 2.8e-25 119.0 131 55.7
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 2.8e-25 119.0 132 54.5
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 6.3e-25 117.9 132 52.3
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 1.1e-24 117.1 135 55.6
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 1.1e-24 117.1 131 51.9
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.4e-24 116.7 124 50.8
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 1.8e-24 116.3 132 53.8
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.8e-24 116.3 130 55.4
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 3.5e-23 112.1 132 52.3
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 7.7e-23 110.9 97 58.8
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.0e-22 110.5 132 51.5
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 1.3e-22 110.2 130 48.5
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 5.0e-22 108.2 121 52.9
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 6.5e-22 107.8 132 50.8
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 6.5e-22 107.8 133 49.6
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.1e-21 107.1 134 51.5
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.1e-21 107.1 129 51.9
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 2.5e-21 105.9 132 50.0
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 3.2e-21 105.5 129 46.5
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 4.2e-21 105.1 106 53.8
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 5.5e-21 104.8 78 64.1
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 7.2e-21 104.4 114 51.8
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 7.2e-21 104.4 135 47.4
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 9.4e-21 104.0 105 53.3
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.2e-20 103.6 93 60.2
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 1.6e-20 103.2 134 47.0
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 2.7e-20 102.4 132 50.8
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 4.7e-20 101.7 130 48.5
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 6.1e-20 101.3 133 45.1
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 6.1e-20 101.3 110 54.5
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 6.1e-20 101.3 75 66.7
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 1.0e-19 100.5 132 46.2
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 1.0e-19 100.5 141 47.5
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 1.4e-19 100.1 131 47.3
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 1.4e-19 100.1 130 47.7
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 1.8e-19 99.8 132 40.2
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.8e-19 99.8 131 48.1
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 1.8e-19 99.8 135 46.7
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.8e-19 99.8 98 57.1
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 4.0e-19 98.6 132 49.2
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 4.0e-19 98.6 129 45.0
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 6.8e-19 97.8 132 49.2
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 6.8e-19 97.8 132 44.7
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.2e-18 97.1 64 73.4
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 3.4e-18 95.5 131 48.9
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 3.4e-18 95.5 131 48.9
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 4.4e-18 95.1 146 44.5
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 5.7e-18 94.7 137 44.5
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 5.7e-18 94.7 131 48.1
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.7e-18 94.7 136 46.3
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 7.5e-18 94.4 132 47.0
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 9.7e-18 94.0 147 44.2
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 9.7e-18 94.0 130 44.6
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.3e-17 93.6 130 48.5
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 1.7e-17 93.2 131 45.0
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 4.8e-17 91.7 91 53.8
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 8.3e-17 90.9 69 65.2
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.3e-17 90.9 98 55.1
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 1.1e-16 90.5 65 69.2
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 1.4e-16 90.1 63 69.8
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 3.1e-16 89.0 130 43.8
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 3.1e-16 89.0 130 47.7
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 3.1e-16 89.0 130 47.7
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 4.1e-16 88.6 66 63.6
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 4.1e-16 88.6 112 50.0
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 5.3e-16 88.2 68 67.6
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.0e-16 87.8 69 66.7
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 2.0e-15 86.3 92 53.3
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 2.0e-15 86.3 92 53.3
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 3.5e-15 85.5 130 43.1
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 1.3e-14 83.6 96 50.0
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.7e-14 83.2 134 45.5
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 2.2e-14 82.8 134 43.3
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 2.2e-14 82.8 136 41.9
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 2.9e-14 82.4 112 42.0
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 5.0e-14 81.6 72 55.6
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 6.5e-14 81.3 135 42.2
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 8.5e-14 80.9 133 45.9
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 3.2e-13 79.0 115 44.3
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 5.5e-13 78.2 146 43.2
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 5.5e-13 78.2 112 44.6
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 7.2e-13 77.8 71 57.7
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 4.7e-12 75.1 166 36.7
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 6.1e-12 74.7 141 39.0
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 1.0e-11 73.9 130 41.5
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.4e-11 73.6 133 40.6
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 5.2e-11 71.6 120 40.0
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 6.8e-11 71.2 106 48.1
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 6.8e-11 71.2 133 39.8
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 8.8e-11 70.9 97 47.4
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 8.8e-11 70.9 87 46.0
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 2.0e-10 69.7 132 37.9
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 3.4e-10 68.9 139 40.3
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 4.4e-10 68.6 131 41.2
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 4.4e-10 68.6 106 47.2
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 5.7e-10 68.2 123 41.5
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 5.7e-10 68.2 101 41.6
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 9.8e-10 67.4 50 60.0
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 1.3e-09 67.0 119 41.2
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 2.8e-09 65.9 123 42.3
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 3.1e-08 62.4 112 36.6
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 4.1e-08 62.0 65 52.3
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 4.1e-08 62.0 127 32.3
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 2.0e-07 59.7 68 48.5
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 2.0e-07 59.7 108 38.0
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 2.7e-07 59.3 115 42.6
PGR044G2447 Punica granatum HOM05D006100 ORTHO05D007539 7.7e-07 57.8 38 68.4


User provided reference genes

Program Settings