Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g13360 Fragaria vesca HOM05D003737 ORTHO05D004640 2.5e-141 505.4 244 100.0
RcHm_v2.0_Chr2g0101681 Rosa chinensis HOM05D003737 ORTHO05D004640 3.7e-60 235.7 265 54.3
FAN23G2857 Fragaria x ananassa HOM05D003737 ORTHO05D004640 2.6e-58 229.6 192 66.7
RcHm_v2.0_Chr2g0101131 Rosa chinensis HOM05D003737 ORTHO05D004640 5.9e-50 201.8 140 73.6
CANSAT56G0630 Cannabis sativa HOM05D003737 ORTHO05D004640 2.4e-35 153.3 206 45.6
TAR636G0393 Trochodendron aralioides HOM05D003737 ORTHO05D004640 7.0e-35 151.8 217 44.2
Dinv20457 Davidia involucrata HOM05D003737 ORTHO05D004640 1.2e-34 151.0 218 43.6
CANSAT78G1307 Cannabis sativa HOM05D003737 ORTHO05D004640 2.0e-34 150.2 207 45.9
Aqoxy2G00024 Aquilegia oxysepala HOM05D003737 ORTHO05D004640 3.5e-34 149.4 208 44.2
ClCG08G008580 Citrullus lanatus HOM05D003737 ORTHO05D004640 3.5e-34 149.4 217 43.8
Manes.05G191000 Manihot esculenta HOM05D003737 ORTHO05D004640 3.5e-34 149.4 222 44.1
MD02G1266700 Malus domestica HOM05D003737 ORTHO05D004640 4.5e-34 149.1 209 44.5
Prupe.2G056900 Prunus persica HOM05D003737 ORTHO05D004640 4.5e-34 149.1 206 47.6
CSS0038854 Camellia sinensis var. sinensis HOM05D003737 ORTHO05D004640 5.9e-34 148.7 214 42.1
CSS0046027 Camellia sinensis var. sinensis HOM05D003737 ORTHO05D004640 5.9e-34 148.7 214 42.1
Sc09g0004980 Simmondsia chinensis HOM05D003737 ORTHO05D004640 5.9e-34 148.7 223 44.8
Cfa010430 Carpinus fangiana HOM05D003737 ORTHO05D004640 7.8e-34 148.3 217 41.9
FAN10G1609 Fragaria x ananassa HOM05D003737 ORTHO05D004640 7.8e-34 148.3 212 44.3
Os01g0267600 Oryza sativa ssp. japonica HOM05D003737 ORTHO05D004640 7.8e-34 148.3 224 42.0
BolC5t34394H Brassica oleracea HOM05D003737 ORTHO05D004640 1.0e-33 147.9 201 40.8
FAN06G1525 Fragaria x ananassa HOM05D003737 ORTHO05D004640 1.0e-33 147.9 213 44.6
MD07G1053000 Malus domestica HOM05D003737 ORTHO05D004640 1.0e-33 147.9 207 44.9
RcHm_v2.0_Chr1g0324281 Rosa chinensis HOM05D003737 ORTHO05D004640 1.0e-33 147.9 213 44.6
FvH4_7g04870 Fragaria vesca HOM05D003737 ORTHO05D004640 1.3e-33 147.5 213 44.6
RcHm_v2.0_Chr1g0330551 Rosa chinensis HOM05D003737 ORTHO05D004640 1.3e-33 147.5 215 43.3
Sed0018433 Sechium edule HOM05D003737 ORTHO05D004640 1.3e-33 147.5 206 43.2
Atru.chr12.1119 Acer truncatum HOM05D003737 ORTHO05D004640 2.3e-33 146.7 212 43.9
MBI19_g24737_MAGBIO Magnolia biondii HOM05D003737 ORTHO05D004640 2.3e-33 146.7 206 43.2
Sed0006452 Sechium edule HOM05D003737 ORTHO05D004640 2.9e-33 146.4 216 40.7
Aa31LG11G5690 Aethionema arabicum HOM05D003737 ORTHO05D004640 3.8e-33 146.0 206 41.7
MELO3C019928.2 Cucumis melo HOM05D003737 ORTHO05D004640 3.8e-33 146.0 210 43.3
Sp6g37810 Schrenkiella parvula HOM05D003737 ORTHO05D004640 5.0e-33 145.6 213 41.3
C05p57390 Brassica napus HOM05D005327 ORTHO05D006655 6.6e-33 145.2 201 40.3
Gorai.012G020700 Gossypium raimondii HOM05D003737 ORTHO05D004640 6.6e-33 145.2 199 46.7
arahy.Tifrunner.gnm1.ann1.3J71J7 Arachis hypogaea HOM05D003737 ORTHO05D004640 8.6e-33 144.8 220 41.8
QL04p051647 Quercus lobata HOM05D003737 ORTHO05D004640 8.6e-33 144.8 206 44.2
Glyma.15G223100 Glycine max HOM05D003737 ORTHO05D004640 1.1e-32 144.4 216 43.5
Lj3g0019804 Lotus japonicus HOM05D003737 ORTHO05D004640 1.1e-32 144.4 218 41.7
TAR633G0465 Trochodendron aralioides HOM05D003737 ORTHO05D004640 1.5e-32 144.1 208 44.2
A05p38490 Brassica napus HOM05D005327 ORTHO05D006655 1.9e-32 143.7 201 41.8
BraA05t22639Z Brassica rapa HOM05D003737 ORTHO05D004640 1.9e-32 143.7 201 41.3
CiPaw.13G048500 Carya illinoinensis HOM05D003737 ORTHO05D004640 1.9e-32 143.7 212 42.9
Cpa.g.sc33.135 Carica papaya HOM05D003737 ORTHO05D004640 2.5e-32 143.3 218 44.0
Glyma.13G185300 Glycine max HOM05D003737 ORTHO05D004640 2.5e-32 143.3 217 43.8
Gorai.010G212200 Gossypium raimondii HOM05D003737 ORTHO05D004640 2.5e-32 143.3 206 43.2
Sp3g09060 Schrenkiella parvula HOM05D003737 ORTHO05D004640 2.5e-32 143.3 201 40.8
arahy.Tifrunner.gnm1.ann1.J916II Arachis hypogaea HOM05D003737 ORTHO05D004640 3.3e-32 142.9 220 41.4
EL10Ac4g08805 Beta vulgaris HOM05D003737 ORTHO05D004640 3.3e-32 142.9 206 43.2
Thhalv10020697m.g Eutrema salsugineum HOM05D003737 ORTHO05D004640 3.3e-32 142.9 201 41.3
Gohir.D06G180700 Gossypium hirsutum HOM05D003737 ORTHO05D004640 3.3e-32 142.9 206 43.2
THA.LOC104823158 Tarenaya hassleriana HOM05D003737 ORTHO05D004640 3.3e-32 142.9 206 44.7
DCAR_003288 Daucus carota HOM05D003737 ORTHO05D004640 4.3e-32 142.5 219 43.8
Nitab4.5_0002687g0030 Nicotiana tabacum HOM05D003737 ORTHO05D004640 4.3e-32 142.5 207 41.5
Zm00001eb128110 Zea mays HOM05D003737 ORTHO05D004640 4.3e-32 142.5 206 44.7
Carub.0003s0996 Capsella rubella HOM05D003737 ORTHO05D004640 5.6e-32 142.1 208 39.4
CsaV3_6G004570 Cucumis sativus L. HOM05D003737 ORTHO05D004640 5.6e-32 142.1 206 44.2
Gohir.D04G017900 Gossypium hirsutum HOM05D003737 ORTHO05D004640 5.6e-32 142.1 199 46.2
Rhsim07G0072700 Rhododendron simsii HOM05D003737 ORTHO05D004640 5.6e-32 142.1 204 43.1
A10p31150 Brassica napus HOM05D003737 ORTHO05D004081 7.3e-32 141.7 207 42.5
BraA10t45159Z Brassica rapa HOM05D003737 ORTHO05D004081 7.3e-32 141.7 207 42.5
CARHR085310 Cardamine hirsuta HOM05D003737 ORTHO05D004640 7.3e-32 141.7 202 41.6
COL.COLO4_05028 Corchorus olitorius HOM05D003737 ORTHO05D004640 7.3e-32 141.7 207 43.0
Duzib106G0442 Durio zibethinus HOM05D003737 ORTHO05D004640 7.3e-32 141.7 204 44.6
Duzib128G0945 Durio zibethinus HOM05D003737 ORTHO05D004640 7.3e-32 141.7 207 44.4
Psat4g141920 Pisum sativum HOM05D003737 ORTHO05D004640 7.3e-32 141.7 217 41.9
TWI34G0525 Tripterygium wilfordii HOM05D003737 ORTHO05D004640 7.3e-32 141.7 211 42.7
C09p71760 Brassica napus HOM05D003737 ORTHO05D004081 9.5e-32 141.4 207 42.5
BolC9t59927H Brassica oleracea HOM05D003737 ORTHO05D004081 9.5e-32 141.4 207 42.5
HPP92_021189 Vanilla planifolia HOM05D003737 ORTHO05D004640 1.2e-31 141.0 202 41.1
Gohir.A06G171900 Gossypium hirsutum HOM05D003737 ORTHO05D004640 1.6e-31 140.6 206 42.7
AT3G10730 Arabidopsis thaliana HOM05D003737 ORTHO05D004640 2.1e-31 140.2 208 39.4
Carub.0006s0393 Capsella rubella HOM05D003737 ORTHO05D004640 2.1e-31 140.2 206 42.7
Gohir.A05G398100 Gossypium hirsutum HOM05D003737 ORTHO05D004640 2.1e-31 140.2 199 44.7
BcaB05g21740 Brassica carinata HOM05D003737 ORTHO05D004640 2.8e-31 139.8 207 42.0
Hma1.2p1_0233F.1_g098040 Hydrangea macrophylla HOM05D003737 ORTHO05D004640 2.8e-31 139.8 210 41.0
AL3G22200 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 3.6e-31 139.4 199 41.2
Phvul.011G188500 Phaseolus vulgaris HOM05D003737 ORTHO05D004640 3.6e-31 139.4 218 41.7
Potri.010G247900 Populus trichocarpa HOM05D003737 ORTHO05D004640 4.7e-31 139.0 206 43.7
VMungo0647G1094 Vigna mungo HOM05D003737 ORTHO05D004640 4.7e-31 139.0 217 41.9
AL6G14700 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 6.1e-31 138.7 206 42.2
Sabra08G0006600 Salix brachista HOM05D003737 ORTHO05D004640 6.1e-31 138.7 203 41.4
TWI32G0890 Tripterygium wilfordii HOM05D003737 ORTHO05D004640 6.1e-31 138.7 214 40.7
Actinidia31420 Actinidia chinensis HOM05D003737 ORTHO05D004640 1.4e-30 137.5 211 40.8
Aa31LG3G3660 Aethionema arabicum HOM05D003737 ORTHO05D004640 1.4e-30 137.5 209 39.2
Potri.008G010900 Populus trichocarpa HOM05D003737 ORTHO05D004640 1.4e-30 137.5 206 41.3
unitig_749.g13793 Utricularia gibba HOM05D003737 ORTHO05D004640 1.4e-30 137.5 205 41.5
AT5G04990 Arabidopsis thaliana HOM05D003737 ORTHO05D004640 2.3e-30 136.7 205 42.0
Thecc.10G131100 Theobroma cacao HOM05D003737 ORTHO05D004640 2.3e-30 136.7 207 44.4
AL532U10020 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 3.1e-30 136.3 199 40.7
Actinidia12270 Actinidia chinensis HOM05D003737 ORTHO05D004640 4.0e-30 136.0 211 41.2
CAN.G134.41 Capsicum annuum HOM05D003737 ORTHO05D004640 4.0e-30 136.0 207 41.5
Thhalv10013430m.g Eutrema salsugineum HOM05D003737 ORTHO05D004640 4.0e-30 136.0 204 42.6
Zm00001eb233650 Zea mays HOM05D003737 ORTHO05D004640 5.2e-30 135.6 195 43.6
CANSAT78G0409 Cannabis sativa HOM05D003737 ORTHO05D004640 8.9e-30 134.8 201 44.3
AUR62041279 Chenopodium quinoa HOM05D003737 ORTHO05D004640 8.9e-30 134.8 208 42.3
ECA240G2259 Erigeron canadensis HOM05D003737 ORTHO05D004640 1.2e-29 134.4 203 39.9
Eucgr.J00319 Eucalyptus grandis HOM05D003737 ORTHO05D004640 1.2e-29 134.4 206 42.2
Nitab4.5_0004903g0010 Nicotiana tabacum HOM05D003737 ORTHO05D004640 1.2e-29 134.4 207 39.6
TPR.G25035 Trifolium pratense HOM05D003737 ORTHO05D004640 1.2e-29 134.4 205 42.0
HanXRQChr09g0247521 Helianthus annuus HOM05D003737 ORTHO05D004640 1.5e-29 134.0 204 42.6
PGR044G1985 Punica granatum HOM05D003737 ORTHO05D004640 1.5e-29 134.0 213 40.8
Sabra10G0193400 Salix brachista HOM05D003737 ORTHO05D004640 1.5e-29 134.0 206 41.7
MSTRG.20485 Avicennia marina HOM05D003737 ORTHO05D004640 2.6e-29 133.3 207 39.6
Lj9C660G5 Lonicera japonica HOM05D003737 ORTHO05D004640 2.6e-29 133.3 216 39.8
Lalb_Chr01g0007591 Lupinus albus HOM05D003737 ORTHO05D004640 3.4e-29 132.9 209 39.7
PSO017G3614 Papaver somniferum HOM05D003737 ORTHO05D004640 3.4e-29 132.9 215 39.5
Peaxi162Scf00220g00010 Petunia axillaris HOM05D003737 ORTHO05D004640 7.5e-29 131.7 207 40.6
CARHR208270 Cardamine hirsuta HOM05D003737 ORTHO05D004640 9.8e-29 131.3 213 39.9
PSO170G3077 Papaver somniferum HOM05D003737 ORTHO05D004640 9.8e-29 131.3 215 39.5
CiPaw.14G038200 Carya illinoinensis HOM05D003737 ORTHO05D004640 1.3e-28 131.0 206 43.2
ECA236G2275 Erigeron canadensis HOM05D003737 ORTHO05D004640 1.3e-28 131.0 214 38.8
Lalb_Chr03g0032471 Lupinus albus HOM05D003737 ORTHO05D004640 1.7e-28 130.6 201 41.3
SGA_v2.0_scaffold309G48158 Striga asiatica HOM05D003737 ORTHO05D004640 1.7e-28 130.6 207 42.5
Lsat_1_v5_gn_1_105040 Lactuca sativa HOM05D003737 ORTHO05D004640 2.2e-28 130.2 212 39.6
HanXRQChr03g0073711 Helianthus annuus HOM05D003737 ORTHO05D004640 6.4e-28 128.6 202 41.1
Solyc01g096780.4 Solanum lycopersicum HOM05D003737 ORTHO05D004640 1.4e-27 127.5 207 40.1
DCAR_022276 Daucus carota HOM05D003737 ORTHO05D004640 1.9e-27 127.1 204 39.7
PSO170G6472 Papaver somniferum HOM05D003737 ORTHO05D004640 1.9e-27 127.1 214 41.1
SGA_v2.0_scaffold182G39819 Striga asiatica HOM05D003737 ORTHO05D004640 1.9e-27 127.1 195 40.0
Medtr8g043510 Medicago truncatula HOM05D003737 ORTHO05D004640 3.2e-27 126.3 205 40.0
Os05g0270200 Oryza sativa ssp. japonica HOM05D003737 ORTHO05D004640 4.1e-27 125.9 206 40.3
PSO782G4010 Papaver somniferum HOM05D003737 ORTHO05D004640 4.1e-27 125.9 213 40.4
Sopen01g040480 Solanum pennellii HOM05D003737 ORTHO05D004640 4.1e-27 125.9 208 39.9
Migut.B01171 Erythranthe guttata HOM05D003737 ORTHO05D004640 7.0e-27 125.2 198 40.4
DCAR_014025 Daucus carota HOM05D003737 ORTHO05D004640 1.2e-26 124.4 139 46.0
Hund06832 Selenicereus undatus HOM05D003737 ORTHO05D004640 1.2e-26 124.4 239 38.5
PGSC0003DMG402027528 Solanum tuberosum HOM05D003737 ORTHO05D004640 1.2e-26 124.4 207 39.6
Pp3c11_22530 Physcomitrium patens HOM05D003737 ORTHO05D004640 1.6e-26 124.0 208 39.4
SEGI_05544 Sequoiadendron giganteum HOM05D003737 ORTHO05D004640 1.6e-26 124.0 207 39.6
ATR0307G049 Amborella trichopoda HOM05D003737 ORTHO05D004640 2.7e-26 123.2 213 38.5
vmacro13791 Vaccinium macrocarpon HOM05D003737 ORTHO05D004640 6.0e-26 122.1 278 32.0
PSO675G8349 Papaver somniferum HOM05D003737 ORTHO05D004640 1.0e-25 121.3 219 37.9
GSVIVG01001935001 Vitis vinifera HOM05D003737 ORTHO05D004640 1.3e-25 120.9 141 48.2
Duzib128G0026 Durio zibethinus HOM05D003737 ORTHO05D004640 1.7e-25 120.6 206 39.3
Oeu013042.2 Olea europaea HOM05D003737 ORTHO05D004640 3.0e-25 119.8 234 34.6
PGR083G2251 Punica granatum HOM05D003737 ORTHO05D004640 6.6e-25 118.6 197 37.6
unitig_22.g5336 Utricularia gibba HOM05D003737 ORTHO05D004640 6.6e-25 118.6 208 35.6
DCAR_022277 Daucus carota HOM05D003737 ORTHO05D004640 1.5e-24 117.5 214 38.8
SHI21216 Sapria himalayana HOM05D003737 ORTHO05D004640 1.5e-24 117.5 238 37.4
Pp3c7_4170 Physcomitrium patens HOM05D003737 ORTHO05D004640 3.3e-24 116.3 208 38.5
Mapoly0147s0033 Marchantia polymorpha HOM05D003737 ORTHO05D004640 7.3e-24 115.2 204 38.2
Lsat_1_v5_gn_1_105000 Lactuca sativa HOM05D003737 ORTHO05D004640 1.2e-23 114.4 187 40.1
vmacro23127 Vaccinium macrocarpon HOM05D003737 ORTHO05D002937 1.2e-23 114.4 223 35.9
SMO104G0002 Selaginella moellendorffii HOM05D003737 ORTHO05D004640 2.8e-23 113.2 207 38.2
SMO266G0096 Selaginella moellendorffii HOM05D003737 ORTHO05D004640 2.8e-23 113.2 207 38.2
Ah.04g162720 Amaranthus hybridus HOM05D000296 ORTHO05D000175 6.2e-23 112.1 272 31.6
SGA_v2.0_scaffold195G40842 Striga asiatica HOM05D003737 ORTHO05D004640 4.0e-22 109.4 203 36.9
BcaC06g32213 Brassica carinata HOM05D003737 ORTHO05D004640 2.6e-21 106.7 155 42.6
CDE09G1399 Ceratophyllum demersum HOM05D003737 ORTHO05D004640 4.9e-20 102.4 153 45.1
Lsat_1_v5_gn_4_103680 Lactuca sativa HOM05D003737 ORTHO05D004640 6.4e-20 102.1 201 36.8
TWI63G1132 Tripterygium wilfordii HOM05D003737 ORTHO05D004640 1.1e-19 101.3 171 39.8
SEGI_23640 Sequoiadendron giganteum HOM05D003737 ORTHO05D004640 1.9e-19 100.5 209 35.9
FAN28G2589 Fragaria x ananassa HOM05D003737 ORTHO05D004640 3.2e-19 99.8 67 76.1
SMO119G0482 Selaginella moellendorffii HOM05D003737 ORTHO05D004640 1.2e-18 97.8 199 34.7
Haze_03384 Corylus avellana HOM05D003737 ORTHO05D004640 3.9e-17 92.8 343 25.7
SMO356G0438 Selaginella moellendorffii HOM05D003737 ORTHO05D004640 5.1e-17 92.4 195 34.9
AagrBONN_evm.TU.Sc2ySwM_344.2065 Anthoceros agrestis HOM05D003737 ORTHO05D004640 6.6e-17 92.0 191 34.6
BolC1t05361H Brassica oleracea HOM05D003737 ORTHO05D004640 3.1e-14 83.2 178 33.1
CDE08G0077 Ceratophyllum demersum HOM05D003737 ORTHO05D004640 3.4e-13 79.7 131 47.3
Nn6g33270 Nelumbo nucifera HOM05D003737 ORTHO05D004640 4.9e-12 75.9 118 39.8
MCO09G802 Micromonas commoda HOM05D003737 ORTHO05D004640 8.3e-12 75.1 190 32.6
Ca_24114_v3 Cicer arietinum L. HOM05D003737 ORTHO05D004640 1.1e-11 74.7 103 45.6
Ciclev10003487m.g Citrus clementina HOM05D003737 ORTHO05D004640 1.9e-11 73.9 104 40.4
QL93p0223_0017 Quercus lobata HOM05D003737 ORTHO05D004640 2.4e-11 73.6 93 44.1
unitig_26.g9749 Utricularia gibba HOM05D003737 ORTHO05D004640 4.1e-11 72.8 103 39.8
Ciclev10001582m.g Citrus clementina HOM05D003737 ORTHO05D004640 5.4e-11 72.4 104 45.2
Lsat_1_v5_gn_7_65181 Lactuca sativa HOM05D003737 ORTHO05D004640 7.1e-11 72.0 103 43.7
HPP92_012444 Vanilla planifolia HOM05D003737 ORTHO05D004640 1.0e-09 68.2 105 41.0
C08p01570 Brassica napus HOM05D003737 ORTHO05D004640 1.7e-09 67.4 125 34.4
AUR62034111 Chenopodium quinoa HOM05D003737 ORTHO05D004640 1.7e-09 67.4 100 42.0
PRCOL_00004494 Prasinoderma coloniale HOM05D003737 ORTHO05D004640 2.3e-09 67.0 193 30.1
FAN03G1506 Fragaria x ananassa HOM05D003737 ORTHO05D004640 1.5e-08 64.3 138 34.8
Cfa015121 Carpinus fangiana HOM05D003737 ORTHO05D004640 2.8e-07 60.1 79 40.5
Phvul.007G106800 Phaseolus vulgaris HOM05D003737 ORTHO05D004640 3.1e-06 56.6 90 38.9


User provided reference genes

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