Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g12820 Fragaria vesca HOM05D006221 ORTHO05D007759 1.1e-63 246.5 125 100.0
RcHm_v2.0_Chr3g0458361 Rosa chinensis HOM05D006221 ORTHO05D007759 3.7e-16 88.6 89 58.4
FAN05G2605 Fragaria x ananassa HOM05D006221 ORTHO05D007759 6.4e-16 87.8 101 50.5
FvH4_6g08390 Fragaria vesca HOM05D006221 ORTHO05D007759 8.3e-16 87.4 101 50.5
FAN02G1566 Fragaria x ananassa HOM05D006221 ORTHO05D007759 1.4e-15 86.7 101 50.5
CiPaw.07G035200 Carya illinoinensis HOM05D006221 ORTHO05D007759 1.2e-14 83.6 80 57.5
Prupe.6G305800 Prunus persica HOM05D006221 ORTHO05D007759 1.6e-14 83.2 79 59.5
Haze_03998 Corylus avellana HOM05D006221 ORTHO05D007759 2.1e-14 82.8 79 58.2
Oeu016545.1 Olea europaea HOM05D006221 ORTHO05D007759 3.5e-14 82.0 101 49.5
QL03p010449 Quercus lobata HOM05D006221 ORTHO05D007759 3.5e-14 82.0 79 58.2
TWI38G0202 Tripterygium wilfordii HOM05D006221 ORTHO05D007759 3.5e-14 82.0 79 54.4
GSVIVG01031316001 Vitis vinifera HOM05D006221 ORTHO05D007759 4.6e-14 81.6 79 58.2
Migut.B00875 Erythranthe guttata HOM05D006221 ORTHO05D007759 6.0e-14 81.3 77 59.7
Atru.chr12.1555 Acer truncatum HOM05D006221 ORTHO05D007759 7.8e-14 80.9 79 57.0
Manes.09G180400 Manihot esculenta HOM05D006221 ORTHO05D007759 7.8e-14 80.9 79 55.7
DCAR_005251 Daucus carota HOM05D006221 ORTHO05D007759 1.0e-13 80.5 100 48.0
arahy.Tifrunner.gnm1.ann1.CKL802 Arachis hypogaea HOM05D006221 ORTHO05D007759 1.3e-13 80.1 108 45.4
PGSC0003DMG400018290 Solanum tuberosum HOM05D006221 ORTHO05D007759 3.0e-13 79.0 102 49.0
ClCG03G017850 Citrullus lanatus HOM05D006221 ORTHO05D007759 5.1e-13 78.2 79 55.7
Dinv30939 Davidia involucrata HOM05D006221 ORTHO05D007759 5.1e-13 78.2 101 47.5
Lalb_Chr18g0046191 Lupinus albus HOM05D006221 ORTHO05D007759 5.1e-13 78.2 79 50.6
Ciclev10011303m.g Citrus clementina HOM05D006221 ORTHO05D007759 6.6e-13 77.8 98 48.0
Rhsim11G0101500 Rhododendron simsii HOM05D006221 ORTHO05D007759 6.6e-13 77.8 79 55.7
Peaxi162Scf00357g00116 Petunia axillaris HOM05D006221 ORTHO05D007759 8.6e-13 77.4 77 58.4
PGR083G2161 Punica granatum HOM05D006221 ORTHO05D007759 8.6e-13 77.4 79 54.4
Glyma.19G226000 Glycine max HOM05D006221 ORTHO05D007759 1.1e-12 77.0 79 48.1
Thecc.05G328800 Theobroma cacao HOM05D006221 ORTHO05D007759 1.1e-12 77.0 79 55.7
Actinidia11678 Actinidia chinensis HOM05D006221 ORTHO05D007759 1.5e-12 76.6 100 46.0
Solyc01g101110.3 Solanum lycopersicum HOM05D006221 ORTHO05D007759 1.5e-12 76.6 97 51.5
CANSAT54G2840 Cannabis sativa HOM05D006221 ORTHO05D007759 1.9e-12 76.3 79 54.4
AUR62000466 Chenopodium quinoa HOM05D006221 ORTHO05D007759 1.9e-12 76.3 97 46.4
AUR62006807 Chenopodium quinoa HOM05D006221 ORTHO05D007759 1.9e-12 76.3 97 46.4
Ca_09279_v3 Cicer arietinum L. HOM05D006221 ORTHO05D007759 1.9e-12 76.3 80 48.8
CsaV3_1G038010 Cucumis sativus L. HOM05D006221 ORTHO05D007759 1.9e-12 76.3 79 55.7
Sed0012716 Sechium edule HOM05D006221 ORTHO05D007759 1.9e-12 76.3 79 54.4
HPP92_001185 Vanilla planifolia HOM05D006221 ORTHO05D007759 1.9e-12 76.3 85 52.9
Eucgr.B01816 Eucalyptus grandis HOM05D006221 ORTHO05D007759 2.5e-12 75.9 79 54.4
Gohir.A13G113400 Gossypium hirsutum HOM05D006221 ORTHO05D007759 2.5e-12 75.9 79 53.2
Gorai.013G131100 Gossypium raimondii HOM05D006221 ORTHO05D007759 2.5e-12 75.9 82 52.4
Lju99A6T47 Lonicera japonica HOM05D006221 ORTHO05D007759 2.5e-12 75.9 77 55.8
Nn3g21902 Nelumbo nucifera HOM05D006221 ORTHO05D007759 2.5e-12 75.9 79 53.2
Sc16g0009350 Simmondsia chinensis HOM05D006221 ORTHO05D007759 2.5e-12 75.9 77 54.5
Cc02_g35760 Coffea canephora HOM05D006221 ORTHO05D007759 3.3e-12 75.5 108 45.4
Dinv30938 Davidia involucrata HOM05D006221 ORTHO05D007759 3.3e-12 75.5 101 46.5
Gohir.D13G116600 Gossypium hirsutum HOM05D006221 ORTHO05D007759 3.3e-12 75.5 79 53.2
Sopen01g044560 Solanum pennellii HOM05D006221 ORTHO05D007759 4.3e-12 75.1 97 50.5
THA.LOC104816844 Tarenaya hassleriana HOM05D006221 ORTHO05D007759 4.3e-12 75.1 79 53.2
Duzib177G0418 Durio zibethinus HOM05D006221 ORTHO05D007759 5.6e-12 74.7 79 54.4
Psat3g014840 Pisum sativum HOM05D006221 ORTHO05D007759 5.6e-12 74.7 80 51.2
MD04G1187300 Malus domestica HOM05D006221 ORTHO05D007759 7.3e-12 74.3 97 48.5
vmacro01605 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 9.5e-12 73.9 109 45.0
Cpa.g.sc48.218 Carica papaya HOM05D006221 ORTHO05D007759 1.2e-11 73.6 76 52.6
Ah.10g026960 Amaranthus hybridus HOM05D006221 ORTHO05D007759 1.6e-11 73.2 97 45.4
Aqoxy2G02530 Aquilegia oxysepala HOM05D006221 ORTHO05D007759 1.6e-11 73.2 80 51.2
Potri.013G003600 Populus trichocarpa HOM05D006221 ORTHO05D007759 1.6e-11 73.2 79 50.6
MSTRG.16421 Avicennia marina HOM05D006221 ORTHO05D007759 2.1e-11 72.8 97 47.4
Lj1g0008157 Lotus japonicus HOM05D006221 ORTHO05D007759 2.8e-11 72.4 80 51.2
EL10Ac4g09547 Beta vulgaris HOM05D006221 ORTHO05D007759 3.6e-11 72.0 79 48.1
Potri.005G003400 Populus trichocarpa HOM05D006221 ORTHO05D007759 3.6e-11 72.0 79 50.6
SalBow5G5479 Salvia bowleyana HOM05D006221 ORTHO05D007759 3.6e-11 72.0 77 51.9
TPR.G1625 Trifolium pratense HOM05D006221 ORTHO05D007759 3.6e-11 72.0 80 46.2
ECA236G2609 Erigeron canadensis HOM05D006221 ORTHO05D007759 4.7e-11 71.6 101 41.6
Medtr7g111610 Medicago truncatula HOM05D006221 ORTHO05D007759 4.7e-11 71.6 80 47.5
Nitab4.5_0001931g0080 Nicotiana tabacum HOM05D006221 ORTHO05D007759 4.7e-11 71.6 77 55.8
Sabra05G0000700 Salix brachista HOM05D006221 ORTHO05D007759 4.7e-11 71.6 79 49.4
Sabra05G0014800 Salix brachista HOM05D006221 ORTHO05D007759 4.7e-11 71.6 79 49.4
Hund07280 Selenicereus undatus HOM05D006221 ORTHO05D007759 4.7e-11 71.6 97 42.3
unitig_699.g19069 Utricularia gibba HOM05D006221 ORTHO05D007759 4.7e-11 71.6 109 48.6
AT1G09450 Arabidopsis thaliana HOM05D006221 ORTHO05D007759 6.2e-11 71.2 100 43.0
Sp1g08060 Schrenkiella parvula HOM05D006221 ORTHO05D007759 6.2e-11 71.2 79 51.9
VMungo1383G1939 Vigna mungo HOM05D006221 ORTHO05D007759 6.2e-11 71.2 79 44.3
Carub.0001s0880 Capsella rubella HOM05D006221 ORTHO05D007759 8.1e-11 70.9 79 50.6
MBI19_g32730_MAGBIO Magnolia biondii HOM05D006221 ORTHO05D007759 8.1e-11 70.9 79 50.6
Hund07275 Selenicereus undatus HOM05D006221 ORTHO05D007759 8.1e-11 70.9 97 42.3
Thhalv10007117m.g Eutrema salsugineum HOM05D006221 ORTHO05D007759 1.1e-10 70.5 78 52.6
PSO017G3773 Papaver somniferum HOM05D006221 ORTHO05D007759 1.1e-10 70.5 79 50.6
A08p34550 Brassica napus HOM05D006221 ORTHO05D007759 1.8e-10 69.7 79 49.4
CARHR009420 Cardamine hirsuta HOM05D006221 ORTHO05D007759 1.8e-10 69.7 79 50.6
Lsat_1_v5_gn_9_77141 Lactuca sativa HOM05D006221 ORTHO05D007759 1.8e-10 69.7 110 40.0
BcaB03g13298 Brassica carinata HOM05D006221 ORTHO05D007759 2.3e-10 69.3 79 48.1
BraA08t35366Z Brassica rapa HOM05D006221 ORTHO05D007759 2.3e-10 69.3 79 48.1
HanXRQChr14g0449401 Helianthus annuus HOM05D006221 ORTHO05D007759 3.1e-10 68.9 100 41.0
Phvul.001G222600 Phaseolus vulgaris HOM05D006221 ORTHO05D007759 3.1e-10 68.9 79 45.6
C08p12920 Brassica napus HOM05D006221 ORTHO05D007759 4.0e-10 68.6 79 48.1
BolC8t48922H Brassica oleracea HOM05D006221 ORTHO05D007759 4.0e-10 68.6 79 48.1
AL1G19970 Arabidopsis lyrata HOM05D006221 ORTHO05D007759 8.9e-10 67.4 79 48.1
BcaC07g38511 Brassica carinata HOM05D006221 ORTHO05D007759 8.9e-10 67.4 79 48.1
PSO210G0944 Papaver somniferum HOM05D006221 ORTHO05D007759 2.0e-09 66.2 79 46.8
PSO761G0564 Papaver somniferum HOM05D006221 ORTHO05D007759 2.6e-09 65.9 79 46.8
ATR0796G167 Amborella trichopoda HOM05D006221 ORTHO05D007759 3.4e-09 65.5 80 43.8
SGA_v2.0_scaffold671G53422 Striga asiatica HOM05D006221 ORTHO05D007759 3.4e-09 65.5 114 42.1
CAN.G1248.26 Capsicum annuum HOM05D006221 ORTHO05D007759 1.3e-08 63.5 106 41.5
Hma1.2p1_0052F.1_g030430 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 1.3e-08 63.5 66 54.5
Hma1.2p1_0052F.1_g030440 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 1.3e-08 63.5 66 54.5
SEGI_23402 Sequoiadendron giganteum HOM05D006221 ORTHO05D007759 1.3e-08 63.5 100 40.0
Zm00001eb109970 Zea mays HOM05D006221 ORTHO05D007759 8.3e-08 60.8 83 45.8
FAN09G0827 Fragaria x ananassa HOM05D006221 ORTHO05D007759 1.4e-07 60.1 103 38.8
arahy.Tifrunner.gnm1.ann1.7121P0 Arachis hypogaea HOM05D006221 ORTHO05D007759 3.2e-07 58.9 108 40.7
SMO169G0298 Selaginella moellendorffii HOM05D006221 ORTHO05D007759 4.1e-07 58.5 71 39.4


User provided reference genes

Program Settings