Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 8.9e-248 859.8 416 100.0
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.6e-241 837.8 429 95.8
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 6.4e-230 800.4 416 92.3
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.1e-216 756.5 423 89.1
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 2.0e-199 699.1 418 80.1
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 2.5e-189 665.6 419 76.1
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 7.2e-189 664.1 423 82.3
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 1.4e-179 633.3 406 72.4
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.8e-179 632.9 413 72.9
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 5.1e-179 631.3 401 74.1
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 6.7e-179 630.9 396 74.0
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 4.4e-178 628.2 413 71.2
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.1e-176 623.6 398 72.4
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 4.1e-176 621.7 410 72.9
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 7.7e-175 617.5 398 73.9
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 3.2e-173 612.1 398 71.6
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 5.2e-171 604.7 398 70.4
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 2.2e-169 599.4 419 67.3
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 3.7e-169 598.6 386 73.3
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.4e-168 596.7 383 73.1
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 3.1e-168 595.5 414 67.6
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 5.3e-168 594.7 411 67.4
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 7.0e-168 594.3 383 71.5
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 1.2e-167 593.6 405 68.6
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.6e-167 593.2 411 66.9
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 5.9e-167 591.3 430 65.8
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.0e-166 590.5 410 69.0
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 1.3e-166 590.1 402 70.6
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 2.2e-166 589.3 419 67.3
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 2.2e-166 589.3 399 67.9
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 2.9e-166 589.0 390 72.3
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 5.0e-166 588.2 386 71.8
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.1e-165 587.0 400 69.0
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.1e-165 587.0 399 67.7
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.5e-165 586.6 394 69.0
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 7.2e-165 584.3 392 69.4
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 9.4e-165 583.9 399 67.2
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 9.4e-165 583.9 396 67.4
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 3.6e-164 582.0 404 67.1
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.4e-163 580.1 384 69.3
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.0e-163 578.9 404 67.3
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 6.8e-163 577.8 417 66.2
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 6.8e-163 577.8 394 68.5
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 1.5e-162 576.6 453 64.2
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.6e-162 575.9 400 68.2
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 3.4e-162 575.5 400 68.2
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 4.4e-162 575.1 384 70.8
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 5.7e-162 574.7 408 66.4
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 7.5e-162 574.3 407 68.6
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 9.8e-162 573.9 418 66.0
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.3e-161 573.5 385 69.1
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 2.8e-161 572.4 385 68.8
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 2.8e-161 572.4 426 64.8
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.1e-160 570.5 365 72.1
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 1.1e-160 570.5 376 69.1
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 2.4e-160 569.3 431 64.0
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 3.1e-160 568.9 415 65.1
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 9.1e-160 567.4 399 65.7
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 4.5e-159 565.1 425 64.0
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 5.9e-159 564.7 401 66.8
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 6.5e-158 561.2 385 69.1
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 1.1e-157 560.5 402 64.7
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 5.5e-157 558.1 358 73.2
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 1.4e-155 553.5 423 63.6
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 2.3e-155 552.7 413 64.6
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 4.0e-155 552.0 399 64.2
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 2.2e-153 546.2 418 62.0
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 3.7e-153 545.4 420 63.8
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 2.4e-152 542.7 399 64.4
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 9.2e-152 540.8 409 63.6
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 1.6e-148 530.0 393 62.8
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.0e-147 527.3 363 66.9
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 7.5e-146 521.2 400 62.2
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 4.6e-143 511.9 387 61.2
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 3.0e-142 509.2 460 55.0
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.0e-139 500.7 426 58.0
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 4.4e-138 495.4 392 61.2
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 7.5e-138 494.6 351 65.2
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 1.3e-137 493.8 407 61.4
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 5.4e-136 488.4 351 65.2
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.5e-133 480.3 362 61.6
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 9.2e-128 461.1 360 60.6
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 5.6e-125 451.8 427 52.2
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.6e-124 450.3 340 63.8
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.4e-120 437.2 289 70.2
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 4.1e-120 435.6 337 60.8
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.3e-118 429.9 305 65.2
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 5.8e-114 415.2 359 56.3
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 2.9e-105 386.3 303 58.4
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 9.3e-96 354.8 254 65.0
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 1.6e-95 354.0 415 50.1
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 2.8e-92 343.2 252 63.9
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 3.1e-91 339.7 213 68.5
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.0e-90 337.0 252 63.1
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 5.5e-88 328.9 386 47.4
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.1e-83 314.7 386 42.5
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 1.8e-83 313.9 348 44.5
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 4.6e-79 299.3 407 41.5
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 2.3e-78 297.0 425 40.7
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 5.1e-78 295.8 402 40.5
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.1e-75 288.1 391 39.1
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.4e-70 271.2 207 61.8
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 1.4e-70 271.2 163 75.5
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.0e-62 245.0 220 55.0
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 3.9e-62 243.0 214 56.5
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.4e-61 239.6 156 71.2
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 3.1e-59 233.4 197 57.9
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 9.1e-51 205.3 137 69.3
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 8.5e-49 198.7 294 38.1
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 1.2e-47 194.9 129 69.0
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.6e-47 194.5 121 71.1
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 4.7e-47 193.0 293 42.0
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 5.5e-40 169.5 97 76.3
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 2.7e-34 150.6 107 61.7
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 4.0e-30 136.7 109 52.3
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 1.8e-27 127.9 126 53.2
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 7.8e-26 122.5 107 56.1
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 8.9e-14 82.4 77 51.9
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 5.8e-13 79.7 42 92.9
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 8.6e-09 65.9 66 54.5


User provided reference genes

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