Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 1.5e-90 336.3 177 100.0
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.8e-85 319.3 177 94.9
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 3.6e-81 305.1 177 89.3
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.5e-74 283.1 202 77.7
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 4.3e-74 281.6 190 82.1
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 2.0e-68 262.7 177 78.5
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 7.8e-68 260.8 177 79.1
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 5.0e-67 258.1 175 78.9
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 5.8e-63 244.6 175 74.3
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 3.5e-60 235.3 171 72.5
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 3.0e-59 232.3 171 69.6
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 5.1e-59 231.5 175 68.6
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 6.6e-59 231.1 177 68.9
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 6.6e-59 231.1 177 68.9
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 1.9e-58 229.6 171 70.2
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.3e-58 228.8 173 67.6
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 3.3e-58 228.8 168 69.6
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 1.2e-57 226.9 168 70.8
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 4.7e-57 224.9 171 67.3
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 1.1e-56 223.8 170 69.4
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 1.8e-56 223.0 174 68.4
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 3.1e-56 222.2 171 67.3
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 5.2e-56 221.5 174 65.5
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 5.2e-56 221.5 172 66.9
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 7.6e-55 217.6 174 66.1
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 1.7e-54 216.5 172 66.3
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 2.2e-54 216.1 173 65.9
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 1.1e-53 213.8 167 67.7
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.9e-53 213.0 172 62.8
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 3.2e-53 212.2 172 64.5
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 3.2e-53 212.2 171 66.1
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 3.2e-53 212.2 173 68.2
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 5.4e-53 211.5 167 66.5
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.6e-52 209.9 172 61.6
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 7.8e-52 207.6 176 61.9
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 1.0e-51 207.2 148 70.9
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 1.7e-51 206.5 171 63.2
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 3.0e-51 205.7 176 61.9
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 3.0e-51 205.7 167 65.3
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 3.9e-51 205.3 175 61.1
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 5.1e-51 204.9 176 62.5
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 8.6e-51 204.1 172 59.9
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 1.1e-50 203.8 176 61.9
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 1.1e-50 203.8 164 66.5
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 1.9e-50 203.0 176 61.4
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 1.9e-50 203.0 176 61.4
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 2.5e-50 202.6 171 60.2
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 4.3e-50 201.8 177 61.0
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 4.3e-50 201.8 176 60.8
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 5.6e-50 201.4 176 60.8
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 5.6e-50 201.4 153 68.6
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 5.6e-50 201.4 153 68.6
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 5.6e-50 201.4 167 62.3
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 7.3e-50 201.1 168 62.5
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 9.6e-50 200.7 176 60.2
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 1.2e-49 200.3 168 61.9
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 1.6e-49 199.9 176 60.8
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 1.6e-49 199.9 174 60.9
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 2.1e-49 199.5 176 59.7
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 2.8e-49 199.1 171 62.0
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 2.8e-49 199.1 171 62.0
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 1.4e-48 196.8 175 61.1
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 6.8e-48 194.5 154 66.2
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 2.6e-47 192.6 174 59.8
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 3.4e-47 192.2 177 60.5
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 5.8e-47 191.4 178 59.0
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 9.9e-47 190.7 168 57.1
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.3e-46 190.3 158 65.2
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 1.7e-46 189.9 201 54.2
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 1.7e-46 189.9 166 60.2
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 3.8e-46 188.7 172 59.3
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 4.9e-46 188.3 172 59.3
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 1.2e-44 183.7 152 65.1
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 2.1e-44 183.0 168 58.3
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 2.7e-44 182.6 147 66.0
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 3.5e-44 182.2 173 56.6
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 6.0e-44 181.4 153 62.1
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 1.3e-43 180.3 277 44.8
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 3.9e-43 178.7 154 61.7
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 8.7e-43 177.6 152 61.8
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 3.3e-42 175.6 128 69.5
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 5.6e-42 174.9 171 56.1
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 1.6e-41 173.3 157 59.9
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.8e-41 172.6 130 64.6
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 8.1e-41 171.0 173 50.9
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 1.8e-40 169.9 171 53.2
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 2.4e-40 169.5 173 55.5
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 3.1e-40 169.1 169 55.0
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 5.3e-40 168.3 163 57.7
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.2e-39 167.2 159 53.5
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 1.2e-39 167.2 174 54.0
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 7.6e-39 164.5 170 52.4
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 2.2e-38 162.9 166 53.0
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 4.9e-38 161.8 176 54.5
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 4.9e-38 161.8 164 53.0
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 4.9e-38 161.8 164 51.8
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 6.4e-38 161.4 137 60.6
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 1.9e-37 159.8 171 53.2
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 3.2e-37 159.1 130 65.4
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 3.2e-37 159.1 154 55.2
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 3.2e-37 159.1 164 51.8
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 4.2e-37 158.7 214 45.8
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 7.1e-37 157.9 172 50.0
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.2e-36 157.1 154 54.5
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 2.1e-36 156.4 134 61.9
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 2.7e-36 156.0 207 47.3
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 4.6e-36 155.2 175 49.1
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 4.6e-36 155.2 175 49.1
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 2.3e-35 152.9 173 49.1
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 2.3e-35 152.9 215 45.6
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 3.9e-35 152.1 174 50.0
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 8.7e-35 151.0 153 54.2
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 1.1e-34 150.6 173 48.6
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 1.5e-34 150.2 132 61.4
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 2.5e-34 149.4 146 55.5
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 4.3e-34 148.7 142 55.6
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 7.3e-34 147.9 128 59.4
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 7.3e-34 147.9 90 76.7
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.6e-33 146.7 145 57.2
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 2.1e-33 146.4 177 51.4
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 2.1e-33 146.4 162 48.8
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.4e-32 142.9 85 92.9
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 3.1e-32 142.5 144 55.6
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 2.0e-31 139.8 137 58.4
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.3e-30 137.1 154 53.2
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.7e-30 136.7 171 48.5
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 2.4e-29 132.9 174 48.3
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 5.4e-29 131.7 175 45.1
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 2.7e-28 129.4 110 61.8
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 7.9e-28 127.9 142 47.2
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.0e-27 127.5 131 52.7
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 6.7e-27 124.8 157 49.7
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 1.3e-25 120.6 176 44.9
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 1.8e-24 116.7 114 59.6
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 9.0e-24 114.4 91 61.5
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 4.5e-23 112.1 83 59.0
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 1.9e-18 96.7 170 35.9
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 4.3e-18 95.5 83 62.7
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 4.3e-18 95.5 79 69.6
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 1.4e-16 90.5 167 34.7
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.4e-16 89.7 51 98.0
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 4.1e-16 89.0 102 52.9
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 4.1e-16 89.0 90 55.6
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 1.5e-15 87.0 107 50.5
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 3.4e-15 85.9 79 63.3
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 7.6e-15 84.7 110 50.9
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 1.3e-14 84.0 136 40.4
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 2.9e-14 82.8 79 60.8
Cpa.g.sc117.83 Carica papaya HOM05D004607 ORTHO05D005836 1.1e-08 64.3 61 57.4
Cre09.g387504 Chlamydomonas reinhardtii HOM05D004607 ORTHO05D005836 4.1e-08 62.4 145 29.0
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 2.6e-07 59.7 68 51.5
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 2.6e-07 59.7 68 51.5
CBR_g18647 Chara braunii HOM05D004607 ORTHO05D005836 8.5e-06 54.7 135 28.9


User provided reference genes

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