Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 5.6e-101 370.9 185 100.0
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 3.6e-100 368.2 185 98.9
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 7.1e-96 354.0 183 94.5
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.5e-93 346.3 221 82.4
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 5.1e-78 294.7 179 82.7
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 1.5e-77 293.1 182 79.7
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 2.1e-76 289.3 185 77.8
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 1.9e-72 276.2 185 74.6
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 1.5e-66 256.5 186 70.4
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 5.8e-66 254.6 183 65.6
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 8.4e-65 250.8 180 70.0
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 4.0e-59 231.9 184 61.4
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 6.9e-59 231.1 181 64.6
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 2.2e-57 226.1 184 64.7
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 2.9e-57 225.7 185 64.9
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 3.8e-57 225.3 183 61.2
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 8.4e-57 224.2 181 63.0
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 1.4e-56 223.4 181 61.9
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 1.4e-56 223.4 181 61.9
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 1.4e-56 223.4 181 62.4
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 5.5e-56 221.5 170 62.9
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 5.5e-56 221.5 181 60.8
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 7.1e-56 221.1 186 59.1
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 1.2e-55 220.3 183 60.1
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 1.6e-55 219.9 181 61.3
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 2.1e-55 219.5 185 63.2
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 2.1e-55 219.5 180 61.1
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 2.7e-55 219.2 181 62.4
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 4.6e-55 218.4 174 64.9
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 7.9e-55 217.6 170 62.9
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 3.0e-54 215.7 183 58.5
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 6.7e-54 214.5 174 60.3
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 6.7e-54 214.5 183 60.7
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 1.9e-53 213.0 183 61.2
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 2.5e-53 212.6 182 59.3
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 2.5e-53 212.6 182 59.3
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.6e-52 209.9 177 60.5
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 2.1e-52 209.5 181 56.9
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 4.8e-52 208.4 181 60.2
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 8.2e-52 207.6 179 62.0
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.1e-51 207.2 169 63.9
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 1.4e-51 206.8 173 61.3
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 4.1e-51 205.3 180 57.2
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 3.4e-50 202.2 183 55.2
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 1.4e-48 196.8 189 55.0
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 2.5e-48 196.1 185 53.0
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 1.2e-47 193.7 190 54.7
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 4.6e-47 191.8 185 53.0
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 7.9e-47 191.0 173 57.2
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 1.8e-46 189.9 190 54.7
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 1.8e-46 189.9 179 53.1
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 2.3e-46 189.5 182 52.7
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 3.9e-46 188.7 181 53.0
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 8.7e-46 187.6 173 56.1
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 2.5e-45 186.0 179 53.1
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 4.3e-45 185.3 180 55.0
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 4.3e-45 185.3 176 55.1
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 5.7e-45 184.9 182 53.8
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 7.4e-45 184.5 183 49.7
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 7.4e-45 184.5 176 53.4
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 7.4e-45 184.5 176 53.4
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 9.7e-45 184.1 173 54.9
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.3e-44 183.7 181 52.5
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 1.6e-44 183.3 182 53.3
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 3.7e-44 182.2 184 55.4
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 3.7e-44 182.2 184 55.4
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 3.7e-44 182.2 184 54.9
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 1.4e-43 180.3 180 55.0
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 1.4e-43 180.3 180 55.0
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 4.1e-43 178.7 193 49.7
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 5.3e-43 178.3 169 55.0
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 9.1e-43 177.6 186 53.8
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 1.5e-42 176.8 172 54.1
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 1.5e-42 176.8 190 47.9
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 2.0e-42 176.4 171 52.6
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.0e-41 174.1 87 95.4
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 2.2e-41 172.9 152 56.6
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 2.9e-41 172.6 186 50.5
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 1.1e-40 170.6 198 46.5
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 1.1e-40 170.6 120 70.8
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 2.5e-40 169.5 189 49.2
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 9.4e-40 167.5 176 51.1
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 1.2e-39 167.2 175 48.6
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.6e-39 166.8 169 53.8
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 2.7e-39 166.0 180 51.1
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 6.1e-39 164.9 177 51.4
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 1.8e-38 163.3 173 52.0
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 2.3e-38 162.9 94 79.8
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 3.9e-38 162.2 181 53.6
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 3.9e-38 162.2 189 49.2
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 7.4e-37 157.9 195 47.7
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 2.2e-36 156.4 164 51.8
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 2.2e-36 156.4 177 49.7
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 9.1e-35 151.0 168 51.8
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 1.5e-34 150.2 112 64.3
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 1.5e-34 150.2 180 45.0
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 7.7e-34 147.9 169 48.5
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 2.2e-33 146.4 182 48.4
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 7.9e-31 137.9 158 46.2
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 1.4e-30 137.1 217 39.6
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 8.8e-30 134.4 167 46.1
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 9.7e-29 131.0 96 63.5
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 4.8e-28 128.6 172 41.9
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 1.8e-27 126.7 201 40.8
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 1.8e-27 126.7 201 40.8
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 9.1e-27 124.4 148 43.2
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 2.0e-26 123.2 80 73.8
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 2.2e-25 119.8 91 61.5
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 6.5e-25 118.2 89 70.8
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 4.2e-24 115.5 156 42.3
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 1.5e-21 107.1 181 38.7
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 4.4e-21 105.5 131 46.6
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 1.3e-20 104.0 98 52.0
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 2.8e-20 102.8 119 45.4
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 2.7e-18 96.3 73 60.3
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 2.9e-17 92.8 145 38.6
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 6.5e-17 91.7 75 62.7
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 9.4e-16 87.8 90 54.4
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 9.8e-13 77.8 89 39.3
Zm00001eb345970 Zea mays HOM05D001617 ORTHO05D008611 7.2e-08 61.6 99 38.4


User provided reference genes

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