Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g09982 Fragaria vesca HOM05D011213 ORTHO05D012867 5.5e-99 364.4 196 100.0
FvH4_2g11355 Fragaria vesca HOM05D000017 ORTHO05D000013 1.3e-79 300.1 196 85.7
FvH4_3g31622 Fragaria vesca HOM05D008248 ORTHO05D010456 3.4e-40 169.1 96 91.7
RcHm_v2.0_Chr3g0494501 Rosa chinensis HOM05D011213 ORTHO05D012867 7.1e-38 161.4 201 53.7
FvH4_6g29311 Fragaria vesca HOM05D000017 ORTHO05D000013 6.2e-34 148.3 101 87.1
RcHm_v2.0_Chr6g0266931 Rosa chinensis HOM05D000017 ORTHO05D000013 2.9e-31 139.4 201 50.2
FAN03G2697 Fragaria x ananassa HOM05D008248 ORTHO05D010456 2.5e-27 126.3 112 69.6
FAN23G1537 Fragaria x ananassa HOM05D011213 ORTHO05D012867 3.1e-25 119.4 200 47.0
FAN23G2842 Fragaria x ananassa HOM05D011213 ORTHO05D012867 3.1e-25 119.4 200 47.0
RcHm_v2.0_Chr7g0223891 Rosa chinensis HOM05D000017 ORTHO05D000013 7.6e-24 114.8 123 56.9
FvH4_6g39831 Fragaria vesca HOM05D000017 ORTHO05D000013 2.2e-23 113.2 118 55.9
RcHm_v2.0_Chr1g0352521 Rosa chinensis HOM05D011213 ORTHO05D012867 1.1e-22 110.9 157 48.4
RcHm_v2.0_Chr5g0079641 Rosa chinensis HOM05D000017 ORTHO05D000013 1.4e-22 110.5 196 44.4
FvH4_6g25413 Fragaria vesca HOM05D000017 ORTHO05D000013 5.1e-20 102.1 156 45.5
FvH4_1g29132 Fragaria vesca HOM05D000017 ORTHO05D000013 1.1e-19 100.9 117 53.0
FvH4_6g32522 Fragaria vesca HOM05D000017 ORTHO05D000013 2.5e-19 99.8 97 56.7
FvH4_3g20431 Fragaria vesca HOM05D000017 ORTHO05D000013 1.6e-18 97.1 102 47.1
FAN17G1279 Fragaria x ananassa HOM05D011213 ORTHO05D012867 8.2e-18 94.7 116 49.1
FvH4_1g10352 Fragaria vesca HOM05D000017 ORTHO05D000013 1.1e-17 94.4 91 58.2
RcHm_v2.0_Chr6g0264981 Rosa chinensis HOM05D011213 ORTHO05D012867 3.4e-16 89.4 90 55.6
FAN16G0499 Fragaria x ananassa HOM05D011213 ORTHO05D012867 1.0e-15 87.8 51 96.1
FAN25G0130 Fragaria x ananassa HOM05D008248 ORTHO05D012867 1.4e-12 77.4 121 46.3
FAN23G1189 Fragaria x ananassa HOM05D011213 ORTHO05D012867 3.0e-12 76.3 87 56.3
FAN08G1731 Fragaria x ananassa HOM05D008248 ORTHO05D012867 3.9e-12 75.9 167 39.5
FAN26G3064 Fragaria x ananassa HOM05D011213 ORTHO05D012867 1.5e-11 73.9 99 49.5
Prupe.8G015400 Prunus persica HOM05D011213 ORTHO05D012867 2.0e-11 73.6 105 44.8
FAN27G2637 Fragaria x ananassa HOM05D011213 ORTHO05D012867 3.7e-10 69.3 100 44.0
Medtr5g081480 Medicago truncatula HOM05D000017 ORTHO05D009934 1.1e-09 67.8 96 39.6
FvH4_6g31092 Fragaria vesca HOM05D000017 ORTHO05D000013 4.1e-09 65.9 160 34.4
FAN08G0624 Fragaria x ananassa HOM05D011213 ORTHO05D012867 9.1e-09 64.7 169 39.6
FvH4_4g33232 Fragaria vesca HOM05D000017 ORTHO05D000013 1.5e-08 63.9 97 39.2
TPR.G28103 Trifolium pratense HOM05D000017 ORTHO05D000013 1.5e-08 63.9 70 47.1
FAN03G1157 Fragaria x ananassa HOM05D008248 ORTHO05D029481 4.5e-08 62.4 206 34.5
Medtr2g090645 Medicago truncatula HOM05D011213 ORTHO05D012867 5.9e-08 62.0 68 47.1
Ca_03485_v3 Cicer arietinum L. HOM05D008773 ORTHO05D010496 1.7e-07 60.5 63 44.4
FAN07G0949 Fragaria x ananassa HOM05D008248 ORTHO05D012867 1.1e-06 57.8 148 40.5
Dinv26433 Davidia involucrata HOM05D000017 ORTHO05D000013 1.9e-06 57.0 70 50.0
FvH4_6g43711 Fragaria vesca HOM05D008248 ORTHO05D010456 1.9e-06 57.0 133 42.9
Medtr2g048835 Medicago truncatula HOM05D000017 ORTHO05D000013 2.5e-06 56.6 75 42.7


User provided reference genes

Program Settings