Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 4.3e-137 491.5 284 100.0
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.3e-137 491.5 284 100.0
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.5e-134 481.5 284 96.5
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 5.5e-124 448.0 284 78.5
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.1e-123 446.0 284 94.0
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 2.2e-104 382.9 283 69.6
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.8e-104 382.5 284 78.9
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.9e-104 381.7 284 83.8
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 7.0e-103 377.9 283 78.1
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 3.0e-98 362.5 283 78.4
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 2.3e-90 336.3 280 61.8
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 3.7e-88 328.9 278 60.8
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.1e-87 327.4 284 58.8
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 1.2e-86 323.9 283 59.0
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 1.2e-86 323.9 281 70.5
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 1.2e-86 323.9 281 61.6
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 1.6e-86 323.6 282 59.9
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 2.7e-86 322.8 280 60.4
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 6.0e-86 321.6 280 59.6
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 1.0e-85 320.9 280 60.7
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 2.3e-85 319.7 281 60.5
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.3e-85 319.7 286 58.7
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 2.3e-85 319.7 286 58.7
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 2.3e-85 319.7 282 59.6
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 6.6e-85 318.2 285 66.7
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 1.5e-84 317.0 279 60.9
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 2.5e-84 316.2 281 59.1
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 2.5e-84 316.2 283 60.8
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 2.1e-83 313.2 284 57.7
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 4.7e-83 312.0 282 69.9
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 4.7e-83 312.0 279 61.6
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 1.4e-82 310.5 284 58.1
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 1.8e-82 310.1 280 57.5
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 8.9e-82 307.8 281 58.7
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.0e-81 306.6 286 56.6
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 3.4e-81 305.8 279 59.1
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 3.4e-81 305.8 279 59.1
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 4.4e-81 305.4 297 55.9
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 3.7e-80 302.4 283 56.5
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 4.9e-80 302.0 280 62.9
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 8.3e-80 301.2 281 62.6
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.3e-80 301.2 218 92.2
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 5.4e-79 298.5 282 56.4
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 5.4e-79 298.5 280 56.1
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 7.1e-79 298.1 282 55.7
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 9.2e-79 297.7 281 55.9
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.6e-78 297.0 280 56.1
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 4.6e-78 295.4 277 56.3
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 6.0e-78 295.0 282 56.0
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 1.0e-77 294.3 280 57.9
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.5e-76 290.4 280 54.6
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 5.6e-76 288.5 282 56.0
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.2e-75 287.3 279 63.4
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 1.2e-75 287.3 278 54.7
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 3.6e-75 285.8 283 60.4
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 3.1e-74 282.7 277 53.1
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 1.5e-73 280.4 279 52.7
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 2.2e-72 276.6 281 54.4
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 4.9e-72 275.4 281 60.9
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 1.4e-71 273.9 260 58.5
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 3.2e-71 272.7 278 52.2
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 9.2e-71 271.2 281 60.1
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 6.0e-70 268.5 286 52.4
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 7.8e-70 268.1 289 61.9
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 1.0e-69 267.7 279 65.9
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 2.5e-68 263.1 286 52.1
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 2.5e-68 263.1 284 52.5
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 3.3e-68 262.7 286 52.4
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 2.8e-67 259.6 280 52.9
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 5.2e-66 255.4 297 48.1
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 5.2e-66 255.4 279 53.0
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 1.4e-63 247.3 302 46.4
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 2.7e-62 243.0 264 51.5
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 5.1e-61 238.8 280 47.5
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 1.1e-60 237.7 256 51.6
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 4.3e-60 235.7 235 55.7
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 9.6e-60 234.6 287 58.5
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 6.9e-58 228.4 273 47.6
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 1.2e-57 227.6 233 55.4
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 7.6e-57 224.9 253 51.8
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 7.6e-57 224.9 245 50.6
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 4.9e-56 222.2 239 51.0
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 9.3e-55 218.0 235 51.1
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 3.9e-53 212.6 285 42.8
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 2.1e-51 206.8 298 46.6
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 1.1e-50 204.5 243 46.9
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 5.1e-45 185.7 285 49.1
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 4.3e-44 182.6 234 45.7
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 2.1e-43 180.3 295 46.8
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 5.3e-42 175.6 133 65.4
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 7.6e-41 171.8 112 73.2
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 7.1e-39 165.2 204 48.0
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 4.6e-38 162.5 265 40.8
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 3.0e-37 159.8 126 65.1
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 8.7e-37 158.3 203 45.8
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 8.7e-37 158.3 234 52.1
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 1.1e-36 157.9 209 45.0
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 3.3e-36 156.4 126 63.5
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 4.3e-36 156.0 126 64.3
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 7.4e-36 155.2 126 63.5
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 7.4e-36 155.2 126 63.5
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.6e-35 154.1 126 62.7
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 6.3e-35 152.1 132 59.8
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 8.2e-35 151.8 172 48.8
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 1.1e-34 151.4 126 61.9
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 1.4e-34 151.0 116 62.9
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 2.4e-34 150.2 292 33.6
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.9e-33 145.6 92 73.9
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 3.8e-32 142.9 116 59.5
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 1.9e-31 140.6 91 74.7
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 6.1e-30 135.6 67 86.6
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 9.7e-28 128.3 230 37.4
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 5.3e-26 122.5 81 66.7
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 4.6e-22 109.4 204 46.1
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.4e-18 97.8 168 38.1
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 2.0e-17 94.0 84 58.3
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 2.5e-15 87.0 75 61.3
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 1.8e-13 80.9 52 71.2
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 7.4e-12 75.5 215 31.6
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 8.5e-08 62.0 86 34.9
Ca_00492_v3 Cicer arietinum L. HOM05D000088 ORTHO05D003056 9.4e-07 58.5 106 31.1
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 1.6e-06 57.8 72 47.2
Thecc.06G161000 Theobroma cacao HOM05D000088 ORTHO05D003056 1.6e-06 57.8 79 34.2
Psat1g193640 Pisum sativum HOM05D000088 ORTHO05D003056 3.6e-06 56.6 106 32.1


User provided reference genes

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