Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g09330 Fragaria vesca HOM05D024246 ORTHO05D045663 2.6e-190 668.7 377 100.0
FAN19G3216 Fragaria x ananassa HOM05D024246 ORTHO05D202071 2.6e-73 280.0 196 74.5
FAN28G2271 Fragaria x ananassa HOM05D024246 ORTHO05D045663 8.0e-46 188.7 132 75.0
FAN23G2678 Fragaria x ananassa HOM05D024246 ORTHO05D201564 2.9e-35 153.7 245 51.0
FAN28G1379 Fragaria x ananassa HOM05D024246 ORTHO05D208459 9.5e-31 138.7 121 76.9
EL10Ac5g11046 Beta vulgaris HOM05D000010 ORTHO05D000302 3.0e-08 63.9 143 30.1
THA.LOC104803935 Tarenaya hassleriana HOM05D000010 ORTHO05D000151 8.6e-08 62.4 129 31.0
Atru.chr7.2471 Acer truncatum HOM05D000010 ORTHO05D010961 4.3e-07 60.1 130 36.2
BcaB03g13703 Brassica carinata HOM05D000010 ORTHO05D000063 4.3e-07 60.1 169 30.2
BcaC05g27810 Brassica carinata HOM05D000010 ORTHO05D000063 7.3e-07 59.3 150 31.3
A05p24380 Brassica napus HOM05D000010 ORTHO05D000063 7.3e-07 59.3 150 31.3
C05p38120 Brassica napus HOM05D000010 ORTHO05D000063 7.3e-07 59.3 150 31.3
BolC5t32540H Brassica oleracea HOM05D000010 ORTHO05D000063 7.3e-07 59.3 150 31.3
BraA05t21330Z Brassica rapa HOM05D000010 ORTHO05D000063 7.3e-07 59.3 150 31.3
ECA233G2268 Erigeron canadensis HOM05D000010 ORTHO05D035160 7.3e-07 59.3 130 28.5
AT1G33060 Arabidopsis thaliana HOM05D000010 ORTHO05D000063 9.6e-07 58.9 169 28.4
Thhalv10007021m.g Eutrema salsugineum HOM05D000010 ORTHO05D000063 9.6e-07 58.9 169 29.0
AL1G47380 Arabidopsis lyrata HOM05D000010 ORTHO05D000063 1.2e-06 58.5 169 29.0
Ciclev10033790m.g Citrus clementina HOM05D000010 ORTHO05D010961 1.2e-06 58.5 118 32.2
Aa31LG6G7620 Aethionema arabicum HOM05D000010 ORTHO05D000063 1.6e-06 58.2 150 31.3
Sp1g28600 Schrenkiella parvula HOM05D000010 ORTHO05D000063 1.6e-06 58.2 150 30.7
Atru.chr12.1391 Acer truncatum HOM05D000010 ORTHO05D000952 6.2e-06 56.2 134 26.1
Actinidia11057 Actinidia chinensis HOM05D013685 ORTHO05D000952 6.2e-06 56.2 131 30.5
Cpa.g.sc37.112 Carica papaya HOM05D000010 ORTHO05D000063 6.2e-06 56.2 160 29.4
AUR62008438 Chenopodium quinoa HOM05D000010 ORTHO05D000302 6.2e-06 56.2 208 24.0
ECA233G0167 Erigeron canadensis HOM05D000010 ORTHO05D035160 6.2e-06 56.2 132 31.8
ATR0068G014 Amborella trichopoda HOM05D000010 ORTHO05D000302 8.1e-06 55.8 131 27.5
Potri.018G095000 Populus trichocarpa HOM05D000010 ORTHO05D050443 8.1e-06 55.8 145 33.1


User provided reference genes

Program Settings