Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 0.0e+00 1957.2 1082 100.0
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1949.9 1082 98.3
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1942.5 1083 99.1
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1931.0 1083 96.9
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1909.8 1123 93.3
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1823.1 1086 93.4
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 0.0e+00 1743.4 1092 86.7
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 0.0e+00 1651.3 1091 81.8
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 0.0e+00 1621.7 1034 81.5
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 0.0e+00 1585.9 1089 79.1
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1553.5 1081 78.2
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 0.0e+00 1548.9 1076 76.7
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 0.0e+00 1548.1 1087 74.8
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 0.0e+00 1548.1 1093 77.5
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1546.6 1097 77.0
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 0.0e+00 1545.4 1076 77.4
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 0.0e+00 1545.0 1071 77.2
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1543.9 1027 81.0
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 0.0e+00 1542.7 1088 76.3
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 0.0e+00 1536.9 1076 76.4
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1535.8 1092 76.7
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1532.7 1088 77.1
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 0.0e+00 1532.3 1071 77.4
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 0.0e+00 1530.8 1094 73.8
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 0.0e+00 1528.1 1082 76.8
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1525.8 1073 77.2
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 0.0e+00 1525.4 1059 76.7
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1521.9 1095 76.3
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1521.9 1095 76.3
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 0.0e+00 1521.5 1091 75.7
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 0.0e+00 1521.1 1030 77.0
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 0.0e+00 1517.3 1077 75.0
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 0.0e+00 1515.0 1095 75.6
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 0.0e+00 1514.6 989 81.0
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 0.0e+00 1513.0 1097 74.6
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 0.0e+00 1505.3 1093 75.4
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 0.0e+00 1503.0 1098 75.6
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 0.0e+00 1501.5 1095 76.3
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1498.8 1118 73.6
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1493.0 1071 75.4
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1489.6 1096 72.2
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1478.8 1116 71.0
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 0.0e+00 1476.8 1096 70.8
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 0.0e+00 1475.7 1091 74.2
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 0.0e+00 1464.9 1040 75.5
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 0.0e+00 1463.4 1049 74.0
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 0.0e+00 1463.0 1107 70.7
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 0.0e+00 1461.8 1187 69.7
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1456.0 1118 72.2
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1446.0 869 82.2
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 0.0e+00 1446.0 869 82.3
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 0.0e+00 1446.0 867 82.7
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1444.5 869 82.2
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 0.0e+00 1440.6 972 74.6
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 0.0e+00 1438.7 935 76.9
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1437.9 1096 70.6
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 0.0e+00 1430.6 1086 70.4
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 0.0e+00 1429.5 1086 70.5
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 0.0e+00 1427.5 1092 69.1
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 0.0e+00 1427.5 1090 70.1
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 0.0e+00 1424.5 938 76.1
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 0.0e+00 1415.2 973 73.5
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1414.4 938 74.7
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 0.0e+00 1412.1 938 74.0
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 0.0e+00 1402.9 1066 70.6
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 0.0e+00 1399.4 1071 69.4
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1397.5 1098 69.6
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1396.7 1094 70.6
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1392.1 939 74.0
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 0.0e+00 1392.1 939 74.0
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1390.9 939 73.9
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 0.0e+00 1390.9 939 73.9
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 0.0e+00 1389.0 971 72.7
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 0.0e+00 1384.0 886 76.7
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1380.2 1084 68.5
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 0.0e+00 1371.7 1089 68.7
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1362.4 1070 69.9
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1360.9 869 78.5
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1359.0 929 73.2
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1357.0 1030 71.2
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 0.0e+00 1356.3 1107 68.7
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 0.0e+00 1346.3 1070 69.6
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1345.1 1004 69.1
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 0.0e+00 1337.8 929 71.5
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1332.8 954 71.2
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 0.0e+00 1323.5 1045 69.6
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1314.7 1034 66.4
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1297.7 1096 68.7
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 0.0e+00 1294.3 1035 66.3
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1283.9 1202 60.1
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 0.0e+00 1282.3 1072 64.1
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1277.3 1009 68.3
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 0.0e+00 1276.9 1086 66.1
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 0.0e+00 1273.8 899 71.5
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1269.6 1251 57.3
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1269.2 1045 64.6
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1248.4 925 69.2
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 0.0e+00 1185.6 1041 59.9
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 0.0e+00 1175.2 880 65.1
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 0.0e+00 1162.1 928 63.1
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 0.0e+00 1109.4 937 60.7
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 0.0e+00 1087.8 692 77.6
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 0.0e+00 1087.4 690 77.7
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 1.6e-304 1049.7 1085 56.6
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 6.9e-268 927.9 635 74.0
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 1.2e-267 927.2 690 69.4
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 3.8e-266 922.2 744 60.8
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 2.4e-260 902.9 620 73.4
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 2.6e-259 899.4 544 80.5
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 9.3e-180 635.2 549 58.7
TAR383G0300 Trochodendron aralioides HOM05D003881 ORTHO05D004343 3.2e-164 583.6 478 70.5
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 1.6e-152 544.7 445 62.0
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 9.7e-145 518.8 318 80.2
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.7e-120 438.3 451 54.1
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 5.9e-118 429.9 368 56.2
Peaxi162Scf00127g00018 Petunia axillaris HOM05D003881 ORTHO05D004343 4.1e-111 407.1 274 74.5
Sopen07g021070 Solanum pennellii HOM05D003881 ORTHO05D004343 2.3e-109 401.4 366 68.6
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 4.4e-97 360.5 233 76.4
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 4.6e-94 350.5 276 65.6
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 6.0e-94 350.1 230 74.8
Psat4g185720 Pisum sativum HOM05D003881 ORTHO05D004343 7.1e-87 326.6 213 77.5
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 6.0e-86 323.6 1028 26.6
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 2.5e-84 318.2 324 54.6
Cre03.g189605 Chlamydomonas reinhardtii HOM05D003881 ORTHO05D004343 3.4e-73 281.2 1072 24.7
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 8.4e-64 250.0 134 88.1
ATR0684G009 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.1e-59 235.3 386 38.3
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 2.4e-55 221.9 174 62.6
SEGI_33062 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.3e-52 211.1 145 69.0
MD15G1215900 Malus domestica HOM05D003881 ORTHO05D004343 1.3e-48 199.5 243 51.9
CSS0024068 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 1.9e-44 185.7 99 85.9
ATR0193G014 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.3e-43 183.0 107 86.0
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 3.1e-42 178.3 225 43.1
Thhalv10002929m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 3.1e-42 178.3 212 46.7
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 2.9e-40 171.8 103 74.8
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 5.5e-39 167.5 108 72.2
HPP92_012481 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.2e-38 166.4 149 58.4
Psat1g224080 Pisum sativum HOM05D003881 ORTHO05D004343 6.1e-38 164.1 104 76.0
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 3.0e-37 161.8 188 48.9
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 7.4e-36 157.1 119 64.7
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 4.8e-35 154.5 237 41.4
Psat0s7528g0040 Pisum sativum HOM05D003881 ORTHO05D004343 9.1e-34 150.2 218 45.0
Psat1g059560 Pisum sativum HOM05D003881 ORTHO05D004343 5.9e-33 147.5 218 44.5
ATR0684G059 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.0e-29 136.7 93 76.3
Psat1g034120 Pisum sativum HOM05D003881 ORTHO05D004343 8.8e-29 133.7 154 52.6
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.5e-25 121.3 484 25.0
Rhsim03G0229000 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.5e-20 106.3 97 66.0
HPP92_006870 Vanilla planifolia HOM05D003881 ORTHO05D004343 5.7e-20 104.4 126 50.8
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.1e-18 100.1 67 70.1
HPP92_006853 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.1e-18 98.2 75 64.0
SEGI_11752 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 5.3e-18 97.8 134 44.8
SEGI_26438 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.2e-17 96.7 59 78.0
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.7e-16 92.8 79 57.0
TPR.G10985 Trifolium pratense HOM05D003881 ORTHO05D004343 8.5e-16 90.5 47 97.9
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.1e-15 90.1 108 48.1
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.1e-15 90.1 108 48.1
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.1e-15 90.1 108 48.1
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 2.5e-15 89.0 51 80.4
vmacro22673 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 5.5e-15 87.8 257 36.2
HPP92_012555 Vanilla planifolia HOM05D003881 ORTHO05D004343 6.7e-13 80.9 186 38.7
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.2e-12 80.1 79 50.6
ATR0193G048 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.3e-11 76.6 106 44.3
Psat6g098400 Pisum sativum HOM05D003881 ORTHO05D004343 2.8e-11 75.5 63 57.1
SEGI_39855 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.7e-11 75.1 65 56.9
C07p09280 Brassica napus HOM05D003881 ORTHO05D004343 1.4e-10 73.2 79 50.6
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 2.4e-10 72.4 61 59.0
BolC7t41346H Brassica oleracea HOM05D003881 ORTHO05D004343 3.1e-10 72.0 79 50.6
CBR_g74625 Chara braunii HOM05D003881 ORTHO05D004343 1.6e-09 69.7 66 54.5
HPP92_028483 Vanilla planifolia HOM05D003881 ORTHO05D004343 2.1e-06 59.3 60 43.3
SEGI_25041 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.6e-06 58.5 83 38.6
SEGI_25641 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.6e-06 58.5 38 68.4
PRCOL_00001933 Prasinoderma coloniale HOM05D026299 ORTHO05D028720 4.7e-06 58.2 146 26.0


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