Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 5.4e-107 391.0 193 100.0
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 5.4e-107 391.0 193 100.0
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.5e-106 388.3 193 99.0
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.0e-101 372.5 192 95.3
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.9e-91 339.3 191 84.8
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 5.1e-89 331.3 198 82.3
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 3.7e-87 325.1 198 80.3
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 2.9e-84 315.5 198 79.3
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 3.8e-84 315.1 192 77.6
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.3e-79 300.1 191 73.8
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 9.0e-78 293.9 192 69.8
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 7.7e-77 290.8 193 70.5
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.7e-76 289.7 198 69.2
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.9e-76 288.9 231 61.9
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 6.5e-76 287.7 197 72.6
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 3.2e-75 285.4 206 66.5
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 4.2e-75 285.0 192 73.4
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 9.4e-75 283.9 194 70.6
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 1.2e-74 283.5 193 67.9
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 2.7e-74 282.3 198 66.2
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 3.6e-74 282.0 197 69.5
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 3.6e-74 282.0 199 67.8
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 4.6e-74 281.6 194 71.1
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 6.1e-74 281.2 191 71.7
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.4e-73 280.0 193 66.3
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 1.4e-73 280.0 193 66.3
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.3e-73 279.3 193 65.8
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 3.9e-73 278.5 195 67.7
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 3.9e-73 278.5 194 69.1
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 5.1e-73 278.1 198 67.2
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 6.7e-73 277.7 210 65.2
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 1.1e-72 276.9 206 64.1
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 1.1e-72 276.9 202 65.8
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 1.5e-72 276.6 195 68.2
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.0e-72 276.2 200 66.0
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 3.3e-72 275.4 194 70.1
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.3e-72 275.4 209 72.7
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 4.3e-72 275.0 205 63.9
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 4.3e-72 275.0 195 68.2
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 9.7e-72 273.9 197 66.0
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 9.7e-72 273.9 197 67.0
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.3e-71 273.5 194 68.6
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 1.7e-71 273.1 199 65.8
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 3.7e-71 271.9 194 67.5
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 2.4e-70 269.2 195 64.6
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 3.1e-70 268.9 198 66.2
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 4.1e-70 268.5 196 65.8
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 9.1e-70 267.3 195 66.2
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 1.5e-69 266.5 213 63.4
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 2.0e-69 266.2 198 63.6
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 5.9e-69 264.6 195 65.6
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 7.7e-69 264.2 197 66.0
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 1.7e-68 263.1 201 64.7
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 2.9e-68 262.3 196 64.3
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 3.8e-68 261.9 204 62.7
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 1.1e-67 260.4 194 63.9
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 1.9e-67 259.6 206 60.7
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 3.2e-67 258.8 194 62.4
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 4.2e-67 258.5 199 61.3
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 9.4e-67 257.3 195 65.6
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 2.7e-66 255.8 197 61.9
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 3.6e-66 255.4 196 61.7
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 6.1e-66 254.6 197 61.4
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 1.0e-65 253.8 197 61.4
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 1.0e-65 253.8 192 62.0
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.8e-65 253.1 190 65.3
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 1.8e-65 253.1 197 60.9
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 1.8e-65 253.1 197 60.9
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.3e-65 252.7 202 60.9
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 3.0e-65 252.3 197 59.9
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 3.9e-65 251.9 198 60.6
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 5.1e-65 251.5 199 60.8
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 5.1e-65 251.5 199 60.8
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 5.1e-65 251.5 219 58.4
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 1.5e-64 250.0 192 57.8
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 2.0e-64 249.6 195 61.0
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 2.0e-64 249.6 199 62.3
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 2.0e-64 249.6 194 63.9
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 4.4e-64 248.4 200 59.5
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 5.7e-64 248.1 196 60.2
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 7.4e-64 247.7 201 60.7
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 2.6e-61 239.2 196 58.7
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 2.5e-59 232.6 186 60.8
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.6e-58 229.9 226 51.8
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 1.5e-56 223.4 142 69.0
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 4.4e-56 221.9 135 68.9
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 3.1e-54 215.7 170 58.8
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 1.0e-52 210.7 165 59.4
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 9.4e-51 204.1 178 60.7
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 3.6e-50 202.2 148 62.2
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 5.2e-49 198.4 201 51.7
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.7e-47 193.4 131 75.6
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 3.2e-43 179.1 186 53.8
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.6e-42 176.8 163 52.1
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 8.8e-41 171.0 148 58.1
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 4.4e-40 168.7 195 48.7
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 5.5e-35 151.8 119 55.5
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.6e-32 142.9 82 87.8
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 7.0e-30 134.8 106 58.5
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 6.6e-28 128.3 115 51.3
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 8.9e-25 117.9 165 36.4
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 2.6e-24 116.3 169 39.1
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 4.4e-24 115.5 69 73.9
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 2.9e-23 112.8 153 42.5
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 3.0e-20 102.8 97 56.7
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 1.4e-17 94.0 56 73.2
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 2.3e-17 93.2 86 58.1
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 4.9e-15 85.5 90 55.6
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 4.9e-15 85.5 49 69.4
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 3.5e-13 79.3 86 52.3
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 2.3e-12 76.6 54 74.1
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 2.0e-08 63.5 45 62.2
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 3.7e-07 59.3 73 41.1
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 1.1e-06 57.8 77 48.1
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 4.1e-06 55.8 34 70.6
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 7.1e-06 55.1 62 41.9
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 7.1e-06 55.1 62 41.9


User provided reference genes

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