Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g05970 Fragaria vesca HOM05D004485 ORTHO05D005485 0.0e+00 1130.5 725 100.0
FAN19G2910 Fragaria x ananassa HOM05D004485 ORTHO05D005485 0.0e+00 1124.4 725 92.3
FAN26G2333 Fragaria x ananassa HOM05D004485 ORTHO05D005485 0.0e+00 1109.7 725 98.2
FAN26G0748 Fragaria x ananassa HOM05D004485 ORTHO05D005485 0.0e+00 1105.1 725 97.9
FAN28G2435 Fragaria x ananassa HOM05D004485 ORTHO05D005485 0.0e+00 1103.6 735 97.4
FAN23G2550 Fragaria x ananassa HOM05D004485 ORTHO05D005485 1.0e-307 1059.7 735 94.6
RcHm_v2.0_Chr2g0091661 Rosa chinensis HOM05D004485 ORTHO05D005485 6.2e-297 1023.8 725 92.3
Prupe.7G221400 Prunus persica HOM05D004485 ORTHO05D005485 1.0e-246 857.1 767 66.6
MD02G1064300 Malus domestica HOM05D004485 ORTHO05D005485 3.0e-243 845.5 725 68.3
MD15G1195100 Malus domestica HOM05D004485 ORTHO05D005485 4.1e-240 835.1 727 68.0
Dinv36695 Davidia involucrata HOM05D004485 ORTHO05D005485 1.0e-206 724.2 728 61.5
Thecc.09G101900 Theobroma cacao HOM05D004485 ORTHO05D005485 6.4e-201 704.9 728 62.4
CiPaw.03G226100 Carya illinoinensis HOM05D004485 ORTHO05D005485 1.9e-200 703.4 734 61.4
CiPaw.04G158800 Carya illinoinensis HOM05D004485 ORTHO05D005485 5.4e-200 701.8 752 60.1
Potri.018G086600 Populus trichocarpa HOM05D004485 ORTHO05D005485 2.7e-199 699.5 725 59.6
QL02p042072 Quercus lobata HOM05D004485 ORTHO05D005485 6.0e-199 698.4 728 61.0
Atru.chr7.1446 Acer truncatum HOM05D004485 ORTHO05D005485 1.0e-198 697.6 729 60.8
CANSAT56G2449 Cannabis sativa HOM05D004485 ORTHO05D005485 2.4e-195 686.4 727 60.4
GSVIVG01015314001 Vitis vinifera HOM05D004485 ORTHO05D005485 3.1e-195 686.0 728 58.9
CSS0002032 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 5.8e-194 681.8 717 60.4
Duzib168G0844 Durio zibethinus HOM05D004485 ORTHO05D005485 2.4e-192 676.4 728 62.1
Ciclev10007632m.g Citrus clementina HOM05D004485 ORTHO05D005485 9.2e-192 674.5 728 60.0
Sabra18G0074900 Salix brachista HOM05D004485 ORTHO05D005485 1.5e-189 667.2 730 58.5
Actinidia09445 Actinidia chinensis HOM05D004485 ORTHO05D005485 9.6e-189 664.5 729 58.3
TWI34G0799 Tripterygium wilfordii HOM05D004485 ORTHO05D005485 2.8e-188 662.9 726 58.1
TAR624G1325 Trochodendron aralioides HOM05D004485 ORTHO05D005485 1.1e-187 661.0 728 57.6
Gohir.A08G242800 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.8e-187 660.2 734 57.9
CSS0009570 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 4.9e-185 652.1 717 58.7
Gohir.A06G066600 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.4e-184 650.6 728 56.6
Gohir.D08G263700 Gossypium hirsutum HOM05D004485 ORTHO05D005485 2.4e-184 649.8 736 56.1
Duzib187G1416 Durio zibethinus HOM05D004485 ORTHO05D005485 5.4e-184 648.7 728 57.4
Gorai.010G076200 Gossypium raimondii HOM05D004485 ORTHO05D005485 2.1e-183 646.7 757 61.0
Gohir.D06G065100 Gossypium hirsutum HOM05D004485 ORTHO05D005485 3.5e-183 646.0 726 56.3
Manes.16G110100 Manihot esculenta HOM05D004485 ORTHO05D005485 4.6e-183 645.6 611 64.0
Nn8g39096 Nelumbo nucifera HOM05D004485 ORTHO05D005485 6.0e-183 645.2 731 56.9
Actinidia17528 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.7e-182 643.7 729 56.5
Eucgr.C01004 Eucalyptus grandis HOM05D004485 ORTHO05D005485 8.7e-182 641.3 733 56.2
Glyma.01G008900 Glycine max HOM05D004485 ORTHO05D005485 5.6e-181 638.6 735 56.6
Glyma.16G077500 Glycine max HOM05D004485 ORTHO05D005485 2.1e-180 636.7 731 55.8
TPR.G21387 Trifolium pratense HOM05D004485 ORTHO05D005485 3.4e-178 629.4 733 64.4
MELO3C004583.2 Cucumis melo HOM05D004485 ORTHO05D005485 9.9e-178 627.9 734 56.1
Hma1.2p1_0571F.1_g180870 Hydrangea macrophylla HOM05D004485 ORTHO05D005485 9.9e-178 627.9 723 56.3
Lalb_Chr14g0371821 Lupinus albus HOM05D004485 ORTHO05D005485 1.7e-177 627.1 734 57.2
CsaV3_2G001970 Cucumis sativus L. HOM05D004485 ORTHO05D005485 2.2e-177 626.7 737 55.8
Oeu053166.1 Olea europaea HOM05D004485 ORTHO05D005485 2.2e-177 626.7 738 61.1
Lj2g0014691 Lotus japonicus HOM05D004485 ORTHO05D005485 4.9e-177 625.5 736 62.8
Sed0011847 Sechium edule HOM05D004485 ORTHO05D005485 8.7e-174 614.8 760 53.8
Ca_25562_v3 Cicer arietinum L. HOM05D004485 ORTHO05D005485 1.5e-173 614.0 733 63.4
Medtr6g088595 Medicago truncatula HOM05D004485 ORTHO05D005485 1.9e-173 613.6 738 64.0
Phvul.004G170300 Phaseolus vulgaris HOM05D004485 ORTHO05D005485 1.8e-171 607.1 726 59.1
Gorai.004G281700 Gossypium raimondii HOM05D004485 ORTHO05D005485 1.7e-169 600.5 620 60.2
Lalb_Chr24g0397331 Lupinus albus HOM05D004485 ORTHO05D005485 1.7e-169 600.5 742 56.6
PGR102G0995 Punica granatum HOM05D004485 ORTHO05D005485 2.9e-169 599.7 747 56.2
Haze_25812 Corylus avellana HOM05D004485 ORTHO05D005485 3.8e-169 599.4 673 59.1
Solyc12g008390.3 Solanum lycopersicum HOM05D004485 ORTHO05D005485 4.9e-169 599.0 740 53.9
Psat1g046640 Pisum sativum HOM05D004485 ORTHO05D005485 6.4e-169 598.6 736 58.2
Sopen12g003350 Solanum pennellii HOM05D004485 ORTHO05D005485 6.4e-169 598.6 740 53.9
THA.LOC104820040 Tarenaya hassleriana HOM05D004485 ORTHO05D005485 8.4e-169 598.2 733 62.2
Sc08g0007920 Simmondsia chinensis HOM05D004485 ORTHO05D005485 2.4e-168 596.7 730 53.7
EL10Ac8g18398 Beta vulgaris HOM05D004485 ORTHO05D005485 4.2e-168 595.9 730 53.6
PSO210G4150 Papaver somniferum HOM05D004485 ORTHO05D005485 7.1e-168 595.1 732 53.8
COL.COLO4_34764 Corchorus olitorius HOM05D004485 ORTHO05D005485 7.9e-167 591.7 726 54.4
Nitab4.5_0013389g0010 Nicotiana tabacum HOM05D004485 ORTHO05D005485 1.8e-166 590.5 784 51.9
Migut.K00530 Erythranthe guttata HOM05D004485 ORTHO05D005485 3.9e-166 589.3 723 54.1
VMungo0464G1472 Vigna mungo HOM05D004485 ORTHO05D005485 3.9e-166 589.3 731 58.3
PSO210G3171 Papaver somniferum HOM05D004485 ORTHO05D005485 4.3e-165 585.9 731 55.3
MSTRG.26380 Avicennia marina HOM05D004485 ORTHO05D005485 3.7e-164 582.8 736 53.7
ClCG11G002190 Citrullus lanatus HOM05D004485 ORTHO05D005485 1.8e-163 580.5 746 52.5
Rhsim05G0040900 Rhododendron simsii HOM05D004485 ORTHO05D005485 1.5e-162 577.4 727 53.0
BolC9t54403H Brassica oleracea HOM05D004485 ORTHO05D005485 4.5e-162 575.9 741 51.4
BcaNung04089 Brassica carinata HOM05D004485 ORTHO05D005485 1.3e-161 574.3 745 53.3
C09p15010 Brassica napus HOM05D004485 ORTHO05D005485 2.5e-160 570.1 741 51.1
BraA09t36912Z Brassica rapa HOM05D004485 ORTHO05D005485 2.7e-159 566.6 735 51.7
HanXRQChr12g0358161 Helianthus annuus HOM05D004485 ORTHO05D005485 7.9e-159 565.1 777 60.5
A09p12650 Brassica napus HOM05D004485 ORTHO05D005485 3.0e-158 563.1 735 51.7
Carub.0003s3420 Capsella rubella HOM05D004485 ORTHO05D005485 6.7e-158 562.0 736 54.1
Thhalv10001922m.g Eutrema salsugineum HOM05D004485 ORTHO05D005485 1.5e-157 560.8 739 51.6
CAN.G1642.10 Capsicum annuum HOM05D004485 ORTHO05D005485 1.6e-156 557.4 733 52.3
arahy.Tifrunner.gnm1.ann1.N3ID59 Arachis hypogaea HOM05D004485 ORTHO05D005485 2.2e-156 557.0 730 55.1
arahy.Tifrunner.gnm1.ann1.8771PM Arachis hypogaea HOM05D004485 ORTHO05D005485 3.1e-155 553.1 766 53.8
AL3G48250 Arabidopsis lyrata HOM05D004485 ORTHO05D005485 4.1e-155 552.7 734 51.9
Sp3g33270 Schrenkiella parvula HOM05D004485 ORTHO05D005485 5.3e-155 552.4 743 57.9
MBI07_g22518_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 6.9e-155 552.0 735 52.4
ECA236G0540 Erigeron canadensis HOM05D004485 ORTHO05D005485 9.0e-155 551.6 616 59.3
Aqoxy7G03881 Aquilegia oxysepala HOM05D004485 ORTHO05D005485 4.5e-154 549.3 756 53.3
AT2G19950 Arabidopsis thaliana HOM05D004485 ORTHO05D005485 5.9e-154 548.9 733 51.6
Os01g0744400 Oryza sativa ssp. japonica HOM05D004485 ORTHO05D005485 1.4e-152 544.3 752 49.6
Nitab4.5_0000566g0170 Nicotiana tabacum HOM05D004485 ORTHO05D005485 2.7e-151 540.0 755 51.0
CARHR110390 Cardamine hirsuta HOM05D004485 ORTHO05D005485 1.0e-150 538.1 737 53.1
AUR62021427 Chenopodium quinoa HOM05D004485 ORTHO05D005485 1.1e-149 534.6 761 49.3
HPP92_005563 Vanilla planifolia HOM05D004485 ORTHO05D005485 1.7e-148 530.8 477 64.4
Aa31LG8G16840 Aethionema arabicum HOM05D004485 ORTHO05D005485 2.2e-148 530.4 724 52.2
vmacro10859 Vaccinium macrocarpon HOM05D004485 ORTHO05D005485 3.7e-148 529.6 656 55.5
unitig_899.g15433 Utricularia gibba HOM05D004485 ORTHO05D005485 1.1e-147 528.1 736 51.2
Zm00001eb371090 Zea mays HOM05D004485 ORTHO05D005485 5.9e-146 522.3 732 48.9
Zm00001eb153530 Zea mays HOM05D004485 ORTHO05D005485 1.7e-145 520.8 743 48.3
CDE04G3494 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 8.8e-142 508.4 721 47.4
Peaxi162Scf00665g00331 Petunia axillaris HOM05D004485 ORTHO05D005485 1.5e-141 507.7 765 48.1
ATR0705G155 Amborella trichopoda HOM05D004485 ORTHO05D005485 1.3e-140 504.6 740 49.1
Lsat_1_v5_gn_8_96840 Lactuca sativa HOM05D004485 ORTHO05D005485 1.7e-137 494.2 794 48.0
MBI01_g35400_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 1.9e-136 490.7 818 44.6
SEGI_40884 Sequoiadendron giganteum HOM05D004485 ORTHO05D005485 6.5e-129 465.7 745 45.1
SGA_v2.0_scaffold129G34191 Striga asiatica HOM05D004485 ORTHO05D005485 4.0e-126 456.4 380 68.9
arahy.Tifrunner.gnm1.ann1.TC5UZA Arachis hypogaea HOM05D004485 ORTHO05D005485 2.9e-121 440.3 741 44.7
arahy.Tifrunner.gnm1.ann1.96JC9B Arachis hypogaea HOM05D004485 ORTHO05D005485 5.2e-118 429.5 741 44.7
BcaC04g22803 Brassica carinata HOM05D004485 ORTHO05D005485 2.2e-116 424.1 633 47.7
AUR62010900 Chenopodium quinoa HOM05D004485 ORTHO05D005485 3.8e-113 413.3 683 50.7
Ah.14g083300 Amaranthus hybridus HOM05D004485 ORTHO05D005485 2.2e-108 397.5 451 56.5
Actinidia39785 Actinidia chinensis HOM05D004485 ORTHO05D005485 8.3e-100 369.0 227 86.3
Oeu064192.1 Olea europaea HOM05D004485 ORTHO05D005485 7.0e-91 339.3 236 80.9
AagrBONN_evm.TU.Sc2ySwM_368.430 Anthoceros agrestis HOM05D004485 ORTHO05D005485 2.1e-90 337.8 727 38.5
Cc06_g10330 Coffea canephora HOM05D004485 ORTHO05D005485 2.5e-88 330.9 554 45.8
Hund28808 Selenicereus undatus HOM05D004485 ORTHO05D005485 1.5e-85 321.6 210 81.9
Hund28810 Selenicereus undatus HOM05D004485 ORTHO05D005485 1.5e-85 321.6 210 81.9
Cc06_g10340 Coffea canephora HOM05D004485 ORTHO05D005485 1.1e-80 305.4 186 88.2
MBI07_g30871_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 1.9e-80 304.7 231 73.6
CDE02G0772 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 4.7e-79 300.1 231 74.0
Hund29368 Selenicereus undatus HOM05D004485 ORTHO05D005485 6.6e-73 279.6 528 42.6
Hund29369 Selenicereus undatus HOM05D004485 ORTHO05D005485 5.6e-72 276.6 528 42.4
Potri.006G164350 Populus trichocarpa HOM05D004485 ORTHO05D005485 1.9e-67 261.5 172 83.7
Cpa.g.sc40.63 Carica papaya HOM05D004485 ORTHO05D005485 4.6e-58 230.3 458 55.2
SMO356G0242 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 7.9e-58 229.6 468 38.9
Cpa.g.sc40.65 Carica papaya HOM05D004485 ORTHO05D005485 6.7e-57 226.5 136 86.8
Actinidia39786 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.4e-54 218.8 445 39.8
CBR_g39203 Chara braunii HOM05D004485 ORTHO05D005485 1.1e-43 182.6 564 32.1
Oeu064194.1 Olea europaea HOM05D004485 ORTHO05D005485 9.3e-43 179.5 450 37.1
DCAR_012046 Daucus carota HOM05D004485 ORTHO05D005485 1.1e-38 166.0 341 42.8
Sc08g0007940 Simmondsia chinensis HOM05D004485 ORTHO05D005485 1.5e-37 162.2 206 54.4
SMO140G0037 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 2.0e-37 161.8 468 37.8
SalBow3G4580 Salvia bowleyana HOM05D004485 ORTHO05D005485 1.7e-31 142.1 116 66.4
Cpa.g.sc40.64 Carica papaya HOM05D004485 ORTHO05D005485 6.9e-30 136.7 86 88.4
PGR102G1041 Punica granatum HOM05D004485 ORTHO05D005485 1.9e-27 128.6 212 46.2
Gohir.D01G081701 Gossypium hirsutum HOM05D004485 ORTHO05D005485 6.3e-23 113.6 68 89.7
Gohir.D04G126400 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.0e-22 110.2 70 87.1
Gohir.D05G357440 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.0e-22 110.2 70 87.1
Gohir.D05G357788 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.0e-22 110.2 70 87.1
arahy.Tifrunner.gnm1.ann1.SL9UG3 Arachis hypogaea HOM05D004485 ORTHO05D005485 2.0e-21 108.6 256 39.8
Gorai.003G091600 Gossypium raimondii HOM05D004485 ORTHO05D005485 4.5e-21 107.5 72 81.9
SHI02696 Sapria himalayana HOM05D004485 ORTHO05D005485 2.6e-16 91.7 393 29.3
A07p00710 Brassica napus HOM05D004485 ORTHO05D005485 3.8e-12 77.8 297 30.0
HPP92_005577 Vanilla planifolia HOM05D004485 ORTHO05D005485 8.5e-12 76.6 65 64.6
BcaC06g36663 Brassica carinata HOM05D004485 ORTHO05D005485 3.2e-11 74.7 243 32.9
Rhsim05G0040800 Rhododendron simsii HOM05D000602 ORTHO05D001147 3.2e-11 74.7 216 44.4
HanXRQChr10g0316161 Helianthus annuus HOM05D004485 ORTHO05D005485 4.4e-08 64.3 50 74.0
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 8.3e-07 60.1 328 24.1
Cre12.g517500 Chlamydomonas reinhardtii HOM05D004485 ORTHO05D005485 1.1e-06 59.7 352 27.8
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 1.8e-06 58.9 328 24.1
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 3.1e-06 58.2 328 23.8
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 4.1e-06 57.8 296 25.7
AagrBONN_evm.TU.Sc2ySwM_344.4779 Anthoceros agrestis HOM05D004897 ORTHO05D005928 9.1e-06 56.6 312 25.0


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