Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 8.6e-67 256.9 135 100.0
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.5e-66 255.4 135 98.5
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 4.3e-66 254.6 135 99.3
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 9.5e-66 253.4 135 97.0
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.1e-65 252.3 135 97.0
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 1.9e-58 229.2 139 89.2
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 1.2e-57 226.5 139 87.8
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 1.4e-56 223.0 137 87.6
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 3.7e-54 214.9 134 85.8
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 1.8e-48 196.1 131 77.9
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 1.8e-48 196.1 131 77.9
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 2.3e-48 195.7 135 75.6
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 5.2e-48 194.5 135 74.1
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 2.6e-47 192.2 137 71.5
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 1.3e-46 189.9 135 74.1
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 2.9e-46 188.7 134 73.1
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 6.4e-46 187.6 143 68.5
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 8.3e-46 187.2 135 74.1
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 1.4e-45 186.4 138 70.3
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.9e-45 186.0 133 72.9
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.4e-45 185.7 133 72.9
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 5.4e-45 184.5 133 71.4
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 7.1e-45 184.1 137 70.1
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 1.2e-44 183.3 133 70.7
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 1.2e-44 183.3 133 69.9
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 1.2e-44 183.3 133 69.9
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 1.6e-44 183.0 133 70.7
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 4.6e-44 181.4 133 72.9
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 7.8e-44 180.6 133 69.9
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 1.0e-43 180.3 137 70.8
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 2.3e-43 179.1 136 69.1
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 3.0e-43 178.7 130 72.3
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 3.0e-43 178.7 134 67.2
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 5.1e-43 177.9 132 68.9
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 8.6e-43 177.2 133 66.2
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 1.5e-42 176.4 130 72.3
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 1.9e-42 176.0 134 68.7
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 2.5e-42 175.6 130 71.5
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 4.3e-42 174.9 134 70.9
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 7.3e-42 174.1 135 65.9
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 7.3e-42 174.1 133 69.9
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 9.5e-42 173.7 134 70.1
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 2.1e-41 172.6 120 75.0
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 2.8e-41 172.2 136 63.2
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 2.8e-41 172.2 136 65.4
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 2.8e-41 172.2 123 73.2
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 2.8e-41 172.2 130 73.1
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 4.7e-41 171.4 137 68.6
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.1e-40 170.2 116 75.9
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 1.4e-40 169.9 131 68.7
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.4e-40 169.9 135 63.7
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.4e-40 169.9 135 63.7
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 1.8e-40 169.5 140 61.4
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 3.1e-40 168.7 137 68.6
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 6.8e-40 167.5 141 62.4
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 8.9e-40 167.2 134 64.2
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 1.5e-39 166.4 137 61.3
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 2.0e-39 166.0 134 64.9
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 2.0e-39 166.0 130 69.2
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 2.6e-39 165.6 133 64.7
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 4.4e-39 164.9 135 63.0
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 4.4e-39 164.9 140 60.7
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 4.4e-39 164.9 137 61.3
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 5.8e-39 164.5 127 68.5
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 5.8e-39 164.5 123 70.7
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 1.3e-38 163.3 136 61.0
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 1.3e-38 163.3 136 61.0
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 2.2e-38 162.5 128 66.4
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 4.9e-38 161.4 121 68.6
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 8.4e-38 160.6 123 69.9
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 1.1e-37 160.2 115 70.4
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 2.4e-37 159.1 134 65.7
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 5.4e-37 157.9 132 65.9
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 5.4e-37 157.9 122 68.9
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 9.2e-37 157.1 133 63.2
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 1.6e-36 156.4 139 58.3
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 1.6e-36 156.4 120 70.0
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 1.9e-34 149.4 121 65.3
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 1.9e-34 149.4 135 59.3
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 5.6e-34 147.9 101 75.2
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 1.6e-33 146.4 115 64.3
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 2.1e-33 146.0 128 60.2
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.1e-32 143.7 130 57.7
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 1.4e-32 143.3 133 58.6
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 3.1e-32 142.1 133 54.1
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 4.0e-32 141.7 124 60.5
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 5.2e-32 141.4 130 58.5
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.0e-31 139.4 128 61.7
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 4.4e-31 138.3 127 59.8
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 1.1e-29 133.7 109 63.3
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 1.4e-29 133.3 133 56.4
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 3.2e-29 132.1 112 62.5
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 2.7e-28 129.0 126 61.1
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 4.6e-28 128.3 135 55.6
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 6.6e-27 124.4 92 72.8
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 2.4e-24 115.9 114 56.1
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 3.8e-22 108.6 125 48.8
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 3.5e-20 102.1 131 45.8
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 3.3e-18 95.5 131 42.0
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 1.3e-14 83.6 125 42.4
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 4.8e-09 65.1 52 63.5


User provided reference genes

Program Settings